GT627496

EST Overview
NameGT627496
Unique NameGT627496
TypeEST
OrganismLens culinaris (lentil)
Sequence length715
Libraries
Library NameType
LIBEST_025390 LCUSE1NGcdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Lens culinaris unigene v1Lens culinaris unigene v1EST
Homology
BLAST of GT627496 vs. TrEMBL
Match: Q9LV94_ARATH (AT5g64830/MXK3_5 OS=Arabidopsis thaliana GN=At5g64830 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 5.290e-27
Identity = 89/262 (33.97%), Postives = 121/262 (46.18%), Query Frame = 3
Query:    3 FTTKIGGXXXXXXXXXXXXXXXX-HCATCANNLSLVAQVYAPLSHHH---HHRILFVFGCVLPKCATS---WRVLRLQKI--------EIADIDTSLPKQQVKVQNPISEDDEDEKQQVKVQNPNXXXXXXXXXXXXXXXXLANALIQAGTLASS-NSKSKTK--------NQRKHQPHNFSTTPSLHNRNDI-PVVPCFYIYTQEEPATEDLXXXXXXXXXXXIKGNGNSAEDSLQAEETWNNEQYEYDKALTVDRTYLKF 713
            +TTKIGG                 +C +C + LSLVAQVYAP+S        R L++FGC++PKC TS   WR   +QK         +IAD+  + PK      +   +DD+DE                          LA AL +A + A+S   K K+K         + K  P    T    H + +   VVPCFYIYT+EE  ++++           IK  G    D  ++EE W +E+YEYDKAL  DRTYLKF
Sbjct:   23 YTTKIGGLPDWPPIPDDALKPELLNCCSCGSKLSLVAQVYAPISTEILDIQERTLYIFGCLMPKCGTSEQSWRAFSIQKAIAKEKGSTKIADLPVAFPKTHRLDGDDDDDDDDDED--------------------FDFASLAKALAEASSAAASITKKQKSKPSGNASSGTKAKPSPLKSETRVEDHIKLETGAVVPCFYIYTKEEIPSKEVDRFSQNYSSLSIKDKGTGNNDESESEEKWEDEKYEYDKALNADRTYLKF 264          
BLAST of GT627496 vs. TrEMBL
Match: Q8LF04_ARATH (Putative uncharacterized protein OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 2.010e-26
Identity = 89/262 (33.97%), Postives = 119/262 (45.42%), Query Frame = 3
Query:    3 FTTKIGGXXXXXXXXXXXXXXXX-HCATCANNLSLVAQVYAPLSHHH---HHRILFVFGCVLPKCATS---WRVLRLQKI--------EIADIDTSLPKQQVKVQNPISEDDEDEKQQVKVQNPNXXXXXXXXXXXXXXXXLANALIQAGTLASS-NSKSKTK--------NQRKHQPHNFSTTPSLHNRNDI-PVVPCFYIYTQEEPATEDLXXXXXXXXXXXIKGNGNSAEDSLQAEETWNNEQYEYDKALTVDRTYLKF 713
            +TTKIGG                 +C +C + L LVAQVYAP+S        R L++FGC++PKC TS   WR   +QK         +IAD+  + PK      +   +DDED                           LA AL +A + A+S   K K+K         + K  P    T    H + +   VVPCFYIYT+EE  +++L           IK  G    D  ++EE W +E+YEYDKAL  DRTYLKF
Sbjct:   23 YTTKIGGLPDWPPIPDDALKPELLNCCSCGSKLPLVAQVYAPISTEILDIQERTLYIFGCLMPKCGTSEQSWRAFSIQKAIAKEKGSTKIADLPVAFPKTHRLDGDDDDDDDED----------------------FDFASLAKALAEASSAAASITKKQKSKPSGNASSGTKAKPSPLKSETRVEDHIKLETGAVVPCFYIYTKEEIPSKELDRCSMNYSSLSIKDKGTGNNDESESEEKWEDEKYEYDKALNADRTYLKF 262          
BLAST of GT627496 vs. TrEMBL
Match: B9STA9_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0431540 PE=4 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.303e-25
Identity = 90/260 (34.62%), Postives = 121/260 (46.54%), Query Frame = 3
Query:    3 FTTKIGGXXXXXXXXXXXXXXXX-HCATCANNLSLVAQVYAPLSHHHHH---RILFVFGCVLPKC---ATSWRVLRLQKIEIADIDTSLPKQQVKVQN-PIS----------EDDEDEKQQVKVQNPNXXXXXXXXXXXXXXXXLANALIQAGTLASSNSKSKTKNQRKHQPHNFSTTPSLHNRN-----DIPVVPCFYIYTQEEPATEDLXXXXXXXXXXXIKGNGNSAEDSLQAEETWNNEQYEYDKALTVDRTYLKF 713
            +T+KIGG                 +C+ C   L LVAQV AP+S        R+L VFGC+LP+C   A SWR LRLQ+++     ++  ++ V V   P+S          +DDE +K                         L  AL +AG+LAS + K     Q+  Q  +   +P +  R      D PVVPCFYIYTQ+EP + ++           IK    S +   + EE W  E YEYDKALT DRTYLKF
Sbjct:   23 YTSKIGGLPDWPFSQESLTPSNLLNCSVCGAKLCLVAQVCAPISSSSFKADDRLLLVFGCLLPECGSNAVSWRALRLQRLDDERKPSTSFEEAVAVSTTPVSVSKTNWLECLDDDESDKD-------------------LDLDALGKALSEAGSLASHSKKP----QKTDQYESLVNSPPMITRTRMVDMDSPVVPCFYIYTQKEPPSGNVTSICSNYSTLSIKDK-QSGDGDQEQEEVWGEEAYEYDKALTADRTYLKF 258          
BLAST of GT627496 vs. TrEMBL
Match: D7MSK3_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_496702 PE=4 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.951e-25
Identity = 82/262 (31.30%), Postives = 119/262 (45.42%), Query Frame = 3
Query:    3 FTTKIGGXXXXXXXXXXXXXXXX-HCATCANNLSLVAQVYAPLS---HHHHHRILFVFGCVLPKCATS---------WRVLRLQK--IEIADIDTSLPKQQVKVQNPISEDDEDEKQQVKVQNPNXXXXXXXXXXXXXXXXLANALIQAGTLASSNSKSKTKNQRKHQPHNFSTTPS-LHNRNDIP---------VVPCFYIYTQEEPATEDLXXXXXXXXXXXIKGNGNSAEDSLQAEETWNNEQYEYDKALTVDRTYLKF 713
            +TTKIGG                 +C +C + LSLVAQVYAP+S        R L++FGC++PKC TS         W+ +  +K   E+ D+    P       + + +DD+DE    +                     LA AL +A + A+S SK +      +     +  PS L +   +          VVPCFYIYT+EE  ++++           IK       D  ++EETW +E+YEYD+AL  DRTYLKF
Sbjct:   23 YTTKIGGLPDWPPIPDDTLKPKLLNCCSCGSKLSLVAQVYAPISIEISDIQERSLYIFGCLMPKCGTSEQSWRAFSVWKAIEKEKESSEMVDLPVPSPPDTSSKTHWLDDDDDDEDFDFE--------------------SLAKALAEASSAAASISKKQKSKPNGNASSGTTARPSPLKSETRVADQIKVETGVVVPCFYIYTKEEIPSKEVDRCSMNYSSLSIKDKETGNNDESESEETWEDEKYEYDRALNADRTYLKF 264          
BLAST of GT627496 vs. TrEMBL
Match: D7SW66_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_31.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00022236001 PE=4 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.881e-24
Identity = 80/223 (35.87%), Postives = 108/223 (48.43%), Query Frame = 3
Query:   75 CATCANNLSLVAQVYAPLSHHH---HHRILFVFGCVLPKC---ATSWRVLRLQKIEIADIDTSLPKQQVKVQNPISEDDEDEKQQVKVQNPNXXXXXXXXXXXXXXXXLANALIQAGTLASSNSKSK----TKNQRKHQPHNFSTTPSLHNRNDIPVVPCFYIYTQEEPATEDLXXXXXXXXXXXIKGNGNSAEDSLQAEETWNNEQYEYDKALTVDRTYLKF 713
            CA C +NL LVAQVYAP+S        R++++FGCV P+C   A+SWR +R+QK+  A  +           +P+S   +D    +     +                L  AL  A +LAS + K      TK   KH P +  T        D PV+PCFY YTQEEP+T ++              + N ++DS Q EETW  E YEYD+    DRTYLKF
Sbjct:   53 CAACQSNLCLVAQVYAPISGKSLKIEERVIYIFGCVAPECEKRASSWRAIRVQKLSSACEEVGRG-----AASPVSALKDDRCDDLWTFG-SGEEGDDGSGEDIDLEELGRALSVAASLASHSKKQMNNQDTKTTEKHLPLSLGTRVVAI---DAPVLPCFYTYTQEEPSTREVTVV-----------SSNYSQDSEQ-EETWEKESYEYDRTWNADRTYLKF 254          
BLAST of GT627496 vs. TrEMBL
Match: B9HG25_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_718924 PE=4 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 1.032e-22
Identity = 82/252 (32.54%), Postives = 120/252 (47.62%), Query Frame = 3
Query:    3 FTTKIGGXXXXXXXXXXXXXXXXHCATCANNLSLVAQVYAPLSH---HHHHRILFVFGCVLPKCAT---SWRVLRLQKIEIADIDTSLPKQQVKVQNP---ISE-----DDEDEKQQVKVQNPNXXXXXXXXXXXXXXXXLANALIQAGTLASSNSKSKTKNQRKHQPHNFSTTPSLHNRN-DIPVVPCFYIYTQEEPATEDLXXXXXXXXXXXIKGNGNSAEDSLQAEETWNNEQYEYDKALTVDRTYLKF 713
            +T+KIGG                 C  C + L LVAQVYAP+S    +   R + VFGC++P C     SWR LR+QK++ ++ ++S+  ++V    P   +S+     DD DE   ++                     L+ AL +AGTLAS +SK K  N+R       ST  +    + + PVVPCFY+YTQE  + + +           +K       +  +  +    E YEYDKAL+ DRTYLKF
Sbjct:   26 YTSKIGGLPDWPFPAENLAPNLLICGACGSKLCLVAQVYAPISSGTLNIEDRTILVFGCIIPNCGNTPLSWRALRVQKVD-SERESSVSTEEVVPSTPPVSVSKTNWLGDDSDEDIDLEA--------------------LSKALSEAGTLAS-HSKKKDGNRRSESVVKNSTLVARTGVDMETPVVPCFYMYTQEPSSKDIVSSICSTYSELSVKEEQICNYNDDEMGDAGEQEVYEYDKALSADRTYLKF 255          
BLAST of GT627496 vs. TrEMBL
Match: C5Y8Y6_SORBI (Putative uncharacterized protein Sb06g030280 OS=Sorghum bicolor GN=Sb06g030280 PE=4 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 7.398e-21
Identity = 78/245 (31.84%), Postives = 111/245 (45.31%), Query Frame = 3
Query:    3 FTTKIGGXXXXXXXXXXXXXXXXHCATCANNLSLVAQVYAPLSHHH-HHRILFVFGCVLPKCAT---SWRVLRLQK----IEIADIDTSLPKQQVKVQNPISEDDEDEKQQVKVQNPNXXXXXXXXXXXXXXXXLANALIQAGTLASSNSKSKTKNQRKHQPHNFSTTPSLHNRNDIPVVPCFYIYTQEEPATEDLXXXXXXXXXXXIKGNGNSAEDSLQAEETWNNEQYEYDKALTVDRTYLKF 713
            +TTKIGG                 C+ C   L LVAQV+AP++  +   RI++V  C+ P+C     SW+VLR+QK    ++       L +        + E+  D+ +  ++ + +                LA AL QA TLAS NSK K K++  + P   S          IPV+PCFYIY  +E                  K   ++A D    EE W  E+YEYDKA+  DRT+LKF
Sbjct:   23 YTTKIGGVPDWPTGDMGIKPETLQCSLCGTKLCLVAQVHAPVAKLNIEERIIYVLVCLTPECGPKPQSWKVLRVQKCRNVMQTEGCGDELGQSNGPPSTSVPEEQNDKNKFPEINDDDFDLDA-----------LAEALEQAATLAS-NSKKKNKSKHANAPVKRSVLKEQACDLSIPVLPCFYIYYDKELYGGKGTVGSSSSELVLDKEIMDTANDE---EEKWEGEKYEYDKAIGADRTFLKF 252          
BLAST of GT627496 vs. TrEMBL
Match: Q7X681_ORYSJ (OSJNBb0079B02.4 protein OS=Oryza sativa subsp. japonica GN=OSJNBb0079B02.4 PE=2 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 2.153e-20
Identity = 73/241 (30.29%), Postives = 104/241 (43.15%), Query Frame = 3
Query:    3 FTTKIGGXXXXXXXXXXXXXXXXHCATCANNLSLVAQVYAPLSHHH-HHRILFVFGCVLPKCAT---SWRVLRLQKIEIADIDTSLPKQQVKVQNPISEDDEDEKQQVKVQNPNXXXXXXXXXXXXXXXXLANALIQAGTLASSNSKSKTKNQRKHQPHNFSTTPSLHNRNDIPVVPCFYIYTQEEPATEDLXXXXXXXXXXXIKGNGNSAEDSLQAEETWNNEQYEYDKALTVDRTYLKF 713
            +TTKIGG                 C  C   L LVAQV+AP++  +  +R ++V  C  PKC T   SW+VLR+QK   +        +  ++   +   +      +   +                  LANAL +A TLA SNSK + K +R + P          +   +PV+PCFYIY  +E   +              K   + A D    EE W  E YEYD+A+  DRT+LKF
Sbjct:   24 YTTKIGGVPDWPTEDMGIKPHLLQCGLCGTKLCLVAQVHAPVAKFNIENRTIYVLVCPKPKCGTNPQSWKVLRVQKCHTSAQTDGKVDETDQINGNVCSSEPSSSSLLNKSH-------EVSDDDFDLDALANALEEAATLA-SNSKKQNKPKRSNAPIKCPVGKQKVDDPSLPVLPCFYIYYGKEQFRDKGSVGSNSSKSVLAKEIADVANDE---EEKWEGENYEYDRAIGADRTFLKF 253          
BLAST of GT627496 vs. TrEMBL
Match: Q01HY1_ORYSA (OSIGBa0138H21-OSIGBa0138E01.15 protein OS=Oryza sativa GN=OSIGBa0138H21-OSIGBa0138E01.15 PE=4 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.153e-20
Identity = 73/241 (30.29%), Postives = 104/241 (43.15%), Query Frame = 3
Query:    3 FTTKIGGXXXXXXXXXXXXXXXXHCATCANNLSLVAQVYAPLSHHH-HHRILFVFGCVLPKCAT---SWRVLRLQKIEIADIDTSLPKQQVKVQNPISEDDEDEKQQVKVQNPNXXXXXXXXXXXXXXXXLANALIQAGTLASSNSKSKTKNQRKHQPHNFSTTPSLHNRNDIPVVPCFYIYTQEEPATEDLXXXXXXXXXXXIKGNGNSAEDSLQAEETWNNEQYEYDKALTVDRTYLKF 713
            +TTKIGG                 C  C   L LVAQV+AP++  +  +R ++V  C  PKC T   SW+VLR+QK   +        +  ++   +   +      +   +                  LANAL +A TLA SNSK + K +R + P          +   +PV+PCFYIY  +E   +              K   + A D    EE W  E YEYD+A+  DRT+LKF
Sbjct:   24 YTTKIGGVPDWPTEDMGIKPHLLQCGLCGTKLCLVAQVHAPVAKFNIENRTIYVLVCPKPKCGTNPQSWKVLRVQKCHTSAQTDGKVDETDQINGNVCSSEPSSSSLLNKSH-------EVSDDDFDLDALANALEEAATLA-SNSKKQNKPKRSNAPIKCPVGKQKVDDPSLPVLPCFYIYYGKEQFRDKGSVGSNSSESVLAKEIADVANDE---EEKWEGENYEYDRAIGADRTFLKF 253          
BLAST of GT627496 vs. TrEMBL
Match: B8AV77_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_17616 PE=4 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.153e-20
Identity = 73/241 (30.29%), Postives = 104/241 (43.15%), Query Frame = 3
Query:    3 FTTKIGGXXXXXXXXXXXXXXXXHCATCANNLSLVAQVYAPLSHHH-HHRILFVFGCVLPKCAT---SWRVLRLQKIEIADIDTSLPKQQVKVQNPISEDDEDEKQQVKVQNPNXXXXXXXXXXXXXXXXLANALIQAGTLASSNSKSKTKNQRKHQPHNFSTTPSLHNRNDIPVVPCFYIYTQEEPATEDLXXXXXXXXXXXIKGNGNSAEDSLQAEETWNNEQYEYDKALTVDRTYLKF 713
            +TTKIGG                 C  C   L LVAQV+AP++  +  +R ++V  C  PKC T   SW+VLR+QK   +        +  ++   +   +      +   +                  LANAL +A TLA SNSK + K +R + P          +   +PV+PCFYIY  +E   +              K   + A D    EE W  E YEYD+A+  DRT+LKF
Sbjct:   24 YTTKIGGVPDWPTEDMGIKPHLLQCGLCGTKLCLVAQVHAPVAKFNIENRTIYVLVCPKPKCGTNPQSWKVLRVQKCHTSAQTDGKVDETDQINGNVCSSEPSSSSLLNKSH-------EVSDDDFDLDALANALEEAATLA-SNSKKQNKPKRSNAPIKCPVGKQKVDDPSLPVLPCFYIYYGKEQFRDKGSVGSNSSESVLAKEIADVANDE---EEKWEGENYEYDRAIGADRTFLKF 253          
BLAST of GT627496 vs. SwissProt
Match: PDD2L_MOUSE (Programmed cell death protein 2-like OS=Mus musculus GN=Pdcd2l PE=2 SV=1)

HSP 1 Score: 54.299 bits (129), Expect = 7.651e-7
Identity = 25/60 (41.67%), Postives = 34/60 (56.67%), Query Frame = 3
Query:   75 CATCANNLSLVAQVYAPLSHHHHHRILFVFGCVLPKCAT----SWRVLRLQKIEIADIDT 242
            C  CA  L+LV QVY PL     HR+L+VF C  P C      SW+V R Q +++ + +T
Sbjct:   49 CGRCAQPLTLVVQVYCPLDGSPFHRLLYVFACARPGCGNSQTRSWKVFRSQCLQVPEKET 108          
BLAST of GT627496 vs. TAIR peptide
Match: AT5G64830.1 (| Symbols: | programmed cell death 2 C-terminal domain-containing protein | chr5:25914911-25916512 REVERSE LENGTH=380)

HSP 1 Score: 125.176 bits (313), Expect = 3.578e-29
Identity = 89/262 (33.97%), Postives = 121/262 (46.18%), Query Frame = 3
Query:    3 FTTKIGGXXXXXXXXXXXXXXXX-HCATCANNLSLVAQVYAPLSHHH---HHRILFVFGCVLPKCATS---WRVLRLQKI--------EIADIDTSLPKQQVKVQNPISEDDEDEKQQVKVQNPNXXXXXXXXXXXXXXXXLANALIQAGTLASS-NSKSKTK--------NQRKHQPHNFSTTPSLHNRNDI-PVVPCFYIYTQEEPATEDLXXXXXXXXXXXIKGNGNSAEDSLQAEETWNNEQYEYDKALTVDRTYLKF 713
            +TTKIGG                 +C +C + LSLVAQVYAP+S        R L++FGC++PKC TS   WR   +QK         +IAD+  + PK      +   +DD+DE                          LA AL +A + A+S   K K+K         + K  P    T    H + +   VVPCFYIYT+EE  ++++           IK  G    D  ++EE W +E+YEYDKAL  DRTYLKF
Sbjct:   23 YTTKIGGLPDWPPIPDDALKPELLNCCSCGSKLSLVAQVYAPISTEILDIQERTLYIFGCLMPKCGTSEQSWRAFSIQKAIAKEKGSTKIADLPVAFPKTHRLDGDDDDDDDDDED--------------------FDFASLAKALAEASSAAASITKKQKSKPSGNASSGTKAKPSPLKSETRVEDHIKLETGAVVPCFYIYTKEEIPSKEVDRFSQNYSSLSIKDKGTGNNDESESEEKWEDEKYEYDKALNADRTYLKF 264          
BLAST of GT627496 vs. TAIR peptide
Match: AT5G64830.2 (| Symbols: | programmed cell death 2 C-terminal domain-containing protein | chr5:25914911-25916074 REVERSE LENGTH=297)

HSP 1 Score: 87.8113 bits (216), Expect = 6.330e-18
Identity = 65/201 (32.34%), Postives = 89/201 (44.28%), Query Frame = 3
Query:  174 LPKCATS---WRVLRLQKI--------EIADIDTSLPKQQVKVQNPISEDDEDEKQQVKVQNPNXXXXXXXXXXXXXXXXLANALIQAGTLASS-NSKSKTK--------NQRKHQPHNFSTTPSLHNRNDI-PVVPCFYIYTQEEPATEDLXXXXXXXXXXXIKGNGNSAEDSLQAEETWNNEQYEYDKALTVDRTYLKF 713
            +PKC TS   WR   +QK         +IAD+  + PK      +   +DD+DE                          LA AL +A + A+S   K K+K         + K  P    T    H + +   VVPCFYIYT+EE  ++++           IK  G    D  ++EE W +E+YEYDKAL  DRTYLKF
Sbjct:    1 MPKCGTSEQSWRAFSIQKAIAKEKGSTKIADLPVAFPKTHRLDGDDDDDDDDDED--------------------FDFASLAKALAEASSAAASITKKQKSKPSGNASSGTKAKPSPLKSETRVEDHIKLETGAVVPCFYIYTKEEIPSKEVDRFSQNYSSLSIKDKGTGNNDESESEEKWEDEKYEYDKALNADRTYLKF 181          
The following BLAST results are available for this feature:
BLAST of GT627496 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
Q9LV94_ARATH5.290e-2733.97AT5g64830/MXK3_5 OS=Arabidopsis thaliana GN=At5g64... [more]
Q8LF04_ARATH2.010e-2633.97Putative uncharacterized protein OS=Arabidopsis th... [more]
B9STA9_RICCO1.303e-2534.62Putative uncharacterized protein OS=Ricinus commun... [more]
D7MSK3_ARALY4.951e-2531.30Putative uncharacterized protein OS=Arabidopsis ly... [more]
D7SW66_VITVI1.881e-2435.87Whole genome shotgun sequence of line PN40024, sca... [more]
B9HG25_POPTR1.032e-2232.54Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
C5Y8Y6_SORBI7.398e-2131.84Putative uncharacterized protein Sb06g030280 OS=So... [more]
Q7X681_ORYSJ2.153e-2030.29OSJNBb0079B02.4 protein OS=Oryza sativa subsp. jap... [more]
Q01HY1_ORYSA2.153e-2030.29OSIGBa0138H21-OSIGBa0138E01.15 protein OS=Oryza sa... [more]
B8AV77_ORYSI2.153e-2030.29Putative uncharacterized protein OS=Oryza sativa s... [more]
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BLAST of GT627496 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
PDD2L_MOUSE7.651e-741.67Programmed cell death protein 2-like OS=Mus muscul... [more]
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BLAST of GT627496 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT5G64830.13.578e-2933.97| Symbols: | programmed cell death 2 C-terminal d... [more]
AT5G64830.26.330e-1832.34| Symbols: | programmed cell death 2 C-terminal d... [more]
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InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 25..42
score: NAcoord: 58..68
score: NAcoord: 80..92
score
NoneNo IPR availableSEGsegsegcoord: 12..22
score
NoneNo IPR availablePANTHERPTHR12298PCDC2 (PROGRAMMED CELL DEATH PROTEIN 2)-RELATEDcoord: 1..237
score: 6.9
NoneNo IPR availablePANTHERPTHR12298:SF3PCDC2-RELATEDcoord: 1..237
score: 6.9
NoneNo IPR availableSEGsegsegcoord: 8..23
score: NAcoord: 111..126
score: NAcoord: 189..199
score
NoneNo IPR availableSEGsegsegcoord: 26..45
score
NoneNo IPR availableSEGsegsegcoord: 45..75
score

Properties
Property NameValue
Singlet in analysisLens culinaris unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GT627496 ID=GT627496; Name=GT627496; organism=Lens culinaris; type=EST; length=715bp
CTTTTACAACCAAAATCGGAGGCCTCCCGGATTGGCCTATTCCCATAGAC
GCCATCGATGCCGATTTGCTTCACTGTGCTACATGTGCCAATAATCTCTC
CCTTGTCGCACAAGTTTATGCTCCTCTTTCTCATCATCATCATCATCGCA
TTCTTTTCGTCTTCGGCTGCGTTTTGCCCAAATGCGCAACCTCTTGGCGA
GTTCTTCGACTTCAGAAAATTGAAATTGCTGACATTGATACCTCTCTACC
TAAACAACAAGTCAAAGTTCAAAATCCTATTTCGGAAGATGATGAAGATG
AAAAACAACAAGTCAAAGTTCAAAATCCTAATTCGGAAGATGATGAAGAT
GAAAGTGAAGACGACATGAGTTTTGAAGAACTGGCCAATGCACTCATTCA
AGCTGGAACTTTGGCTTCTTCTAATTCTAAATCTAAGACCAAAAACCAAA
GGAAGCACCAACCCCACAATTTCTCTACAACACCTTCACTTCATAATCGT
AATGATATTCCAGTGGTGCCTTGCTTTTATATATACACACAGGAAGAGCC
AGCTACAGAGGATCTTAGTTCTGTATGCTCTAGCTATTCATCACTTTCTA
TTAAGGGGAATGGAAATTCTGCTGAGGATAGTTTGCAAGCAGAAGAAACC
TGGAATAATGAACAGTATGAATATGATAAAGCTTTGACTGTGGATAGAAC
TTACCTCAAGTTCAA
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