EX569441
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EX569441 vs. TrEMBL
Match: C6T593_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 8.691e-28 Identity = 58/60 (96.67%), Postives = 58/60 (96.67%), Query Frame = 2 Query: 53 TLHAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPVLICRNEAEKCLIETSINSLRISL 232 TL AAMCLQNFPCQEVERHNKPEVELKTS ELLLNPVLICRNEAEKCLIETSINSLRISL Sbjct: 15 TLEAAMCLQNFPCQEVERHNKPEVELKTSPELLLNPVLICRNEAEKCLIETSINSLRISL 74 HSP 2 Score: 28.8758 bits (63), Expect = 8.691e-28 Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = 1 Query: 22 TLRLYLTCIRNT 57 TLRLYLTCIRNT Sbjct: 4 TLRLYLTCIRNT 15
BLAST of EX569441 vs. TrEMBL
Match: C5WSX3_SORBI (Putative uncharacterized protein Sb01g001300 OS=Sorghum bicolor GN=Sb01g001300 PE=4 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.918e-27 Identity = 56/60 (93.33%), Postives = 58/60 (96.67%), Query Frame = 2 Query: 53 TLHAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPVLICRNEAEKCLIETSINSLRISL 232 TL AAMCLQNFPCQEVERHNKPEVELKTS ELLLNPVLICRNEAEKCLIETSINS+RIS+ Sbjct: 17 TLEAAMCLQNFPCQEVERHNKPEVELKTSPELLLNPVLICRNEAEKCLIETSINSIRISM 76 HSP 2 Score: 29.261 bits (64), Expect = 1.918e-27 Identity = 12/17 (70.59%), Postives = 13/17 (76.47%), Query Frame = 1 Query: 7 LMATTTLRLYLTCIRNT 57 + TLRLYLTCIRNT Sbjct: 1 MSTANTLRLYLTCIRNT 17
BLAST of EX569441 vs. TrEMBL
Match: B6UFY0_MAIZE (Actin-related protein 2/3 complex subunit 4 OS=Zea mays PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 2.496e-27 Identity = 56/60 (93.33%), Postives = 58/60 (96.67%), Query Frame = 2 Query: 53 TLHAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPVLICRNEAEKCLIETSINSLRISL 232 TL AAMCLQNFPCQEVERHNKPEVELKTS ELLLNPVLICRNEAEKCLIETSINS+RIS+ Sbjct: 19 TLEAAMCLQNFPCQEVERHNKPEVELKTSPELLLNPVLICRNEAEKCLIETSINSIRISM 78 HSP 2 Score: 28.8758 bits (63), Expect = 2.496e-27 Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = 1 Query: 22 TLRLYLTCIRNT 57 TLRLYLTCIRNT Sbjct: 8 TLRLYLTCIRNT 19
BLAST of EX569441 vs. TrEMBL
Match: Q852C5_ORYSJ (Actin-related protein 2/3 complex subunit 4, putative, expressed OS=Oryza sativa subsp. japonica GN=OSJNBb0096M04.125 PE=4 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 2.497e-27 Identity = 56/60 (93.33%), Postives = 58/60 (96.67%), Query Frame = 2 Query: 53 TLHAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPVLICRNEAEKCLIETSINSLRISL 232 TL AAMCLQNFPCQEVERHNKPEVELKTS ELLLNPVLICRNEAEKCLIETSINS+RIS+ Sbjct: 15 TLEAAMCLQNFPCQEVERHNKPEVELKTSPELLLNPVLICRNEAEKCLIETSINSIRISM 74 HSP 2 Score: 28.8758 bits (63), Expect = 2.497e-27 Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = 1 Query: 22 TLRLYLTCIRNT 57 TLRLYLTCIRNT Sbjct: 4 TLRLYLTCIRNT 15
BLAST of EX569441 vs. TrEMBL
Match: A2XP21_ORYSI (Actin-related protein 2/3 complex subunit 4 OS=Oryza sativa subsp. indica GN=OsI_14322 PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 2.497e-27 Identity = 56/60 (93.33%), Postives = 58/60 (96.67%), Query Frame = 2 Query: 53 TLHAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPVLICRNEAEKCLIETSINSLRISL 232 TL AAMCLQNFPCQEVERHNKPEVELKTS ELLLNPVLICRNEAEKCLIETSINS+RIS+ Sbjct: 15 TLEAAMCLQNFPCQEVERHNKPEVELKTSPELLLNPVLICRNEAEKCLIETSINSIRISM 74 HSP 2 Score: 28.8758 bits (63), Expect = 2.497e-27 Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = 1 Query: 22 TLRLYLTCIRNT 57 TLRLYLTCIRNT Sbjct: 4 TLRLYLTCIRNT 15
BLAST of EX569441 vs. TrEMBL
Match: Q84SP9_ORYSJ (Putative ARP2/3 complex 20 kDa subunit, 3'-partial (Fragment) OS=Oryza sativa subsp. japonica GN=OSJNBb0043P23.1 PE=4 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 2.498e-27 Identity = 56/60 (93.33%), Postives = 58/60 (96.67%), Query Frame = 2 Query: 53 TLHAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPVLICRNEAEKCLIETSINSLRISL 232 TL AAMCLQNFPCQEVERHNKPEVELKTS ELLLNPVLICRNEAEKCLIETSINS+RIS+ Sbjct: 15 TLEAAMCLQNFPCQEVERHNKPEVELKTSPELLLNPVLICRNEAEKCLIETSINSIRISM 74 HSP 2 Score: 28.8758 bits (63), Expect = 2.498e-27 Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = 1 Query: 22 TLRLYLTCIRNT 57 TLRLYLTCIRNT Sbjct: 4 TLRLYLTCIRNT 15
BLAST of EX569441 vs. TrEMBL
Match: B9RWE0_RICCO (Arp2/3 complex 20 kD subunit, putative OS=Ricinus communis GN=RCOM_1018440 PE=4 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.233e-27 Identity = 57/60 (95.00%), Postives = 58/60 (96.67%), Query Frame = 2 Query: 53 TLHAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPVLICRNEAEKCLIETSINSLRISL 232 TL AAMCLQNFPCQEVERHNKPEVELKTS ELLLNP+LICRNEAEKCLIETSINSLRISL Sbjct: 15 TLEAAMCLQNFPCQEVERHNKPEVELKTSPELLLNPILICRNEAEKCLIETSINSLRISL 74 HSP 2 Score: 26.9498 bits (58), Expect = 4.233e-27 Identity = 11/11 (100.00%), Postives = 11/11 (100.00%), Query Frame = 1 Query: 25 LRLYLTCIRNT 57 LRLYLTCIRNT Sbjct: 5 LRLYLTCIRNT 15
BLAST of EX569441 vs. TrEMBL
Match: D7MH64_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_330101 PE=4 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.060e-26 Identity = 58/60 (96.67%), Postives = 58/60 (96.67%), Query Frame = 2 Query: 53 TLHAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPVLICRNEAEKCLIETSINSLRISL 232 TL AAMCLQNFPCQEVERHNKPEVELKTS ELLLNPVLICRNEAEKCLIETSINSLRISL Sbjct: 15 TLEAAMCLQNFPCQEVERHNKPEVELKTSPELLLNPVLICRNEAEKCLIETSINSLRISL 74 HSP 2 Score: 24.2534 bits (51), Expect = 2.060e-26 Identity = 9/12 (75.00%), Postives = 11/12 (91.67%), Query Frame = 1 Query: 22 TLRLYLTCIRNT 57 +LRLYL CI+NT Sbjct: 4 SLRLYLACIKNT 15
BLAST of EX569441 vs. TrEMBL
Match: Q2V3I8_ARATH (Putative uncharacterized protein At4g14147.1 OS=Arabidopsis thaliana GN=At4g14147 PE=1 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.061e-26 Identity = 58/60 (96.67%), Postives = 58/60 (96.67%), Query Frame = 2 Query: 53 TLHAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPVLICRNEAEKCLIETSINSLRISL 232 TL AAMCLQNFPCQEVERHNKPEVELKTS ELLLNPVLICRNEAEKCLIETSINSLRISL Sbjct: 15 TLEAAMCLQNFPCQEVERHNKPEVELKTSPELLLNPVLICRNEAEKCLIETSINSLRISL 74 HSP 2 Score: 24.2534 bits (51), Expect = 2.061e-26 Identity = 9/12 (75.00%), Postives = 11/12 (91.67%), Query Frame = 1 Query: 22 TLRLYLTCIRNT 57 +LRLYL CI+NT Sbjct: 4 SLRLYLACIKNT 15
BLAST of EX569441 vs. TrEMBL
Match: D7SNI9_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_29.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00020914001 PE=4 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 2.676e-26 Identity = 57/60 (95.00%), Postives = 58/60 (96.67%), Query Frame = 2 Query: 53 TLHAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPVLICRNEAEKCLIETSINSLRISL 232 TL AAMCLQNFPCQEVERHNKPEVELKTS E+LLNPVLICRNEAEKCLIETSINSLRISL Sbjct: 40 TLEAAMCLQNFPCQEVERHNKPEVELKTSPEVLLNPVLICRNEAEKCLIETSINSLRISL 99 HSP 2 Score: 25.0238 bits (53), Expect = 2.676e-26 Identity = 10/12 (83.33%), Postives = 10/12 (83.33%), Query Frame = 1 Query: 22 TLRLYLTCIRNT 57 T RLY TCIRNT Sbjct: 29 TSRLYFTCIRNT 40
BLAST of EX569441 vs. SwissProt
Match: ARPC4_DICDI (Actin-related protein 2/3 complex subunit 4 OS=Dictyostelium discoideum GN=arcD PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 6.458e-18 Identity = 44/60 (73.33%), Postives = 52/60 (86.67%), Query Frame = 2 Query: 53 TLHAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPVLICRNEAEKCLIETSINSLRISL 232 TL A+MCLQNF Q VERHNKPEVE+KTS EL+LNPV+I RN+ E+ LIETSINS+RIS+ Sbjct: 15 TLTASMCLQNFGSQIVERHNKPEVEVKTSKELVLNPVIIARNKNERVLIETSINSIRISV 74
BLAST of EX569441 vs. SwissProt
Match: ARPC4_MOUSE (Actin-related protein 2/3 complex subunit 4 OS=Mus musculus GN=Arpc4 PE=1 SV=3) HSP 1 Score: 85.8853 bits (211), Expect = 7.140e-17 Identity = 42/61 (68.85%), Postives = 50/61 (81.97%), Query Frame = 2 Query: 50 ATLHAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPVLICRNEAEKCLIETSINSLRISL 232 ATL AA+CL+NF Q VERHNKPEVE+++S ELLL PV I RNE EK LIE SINS+R+S+ Sbjct: 14 ATLQAALCLENFSSQVVERHNKPEVEVRSSKELLLQPVTISRNEKEKVLIEGSINSVRVSI 74
BLAST of EX569441 vs. SwissProt
Match: ARPC4_HUMAN (Actin-related protein 2/3 complex subunit 4 OS=Homo sapiens GN=ARPC4 PE=1 SV=3) HSP 1 Score: 85.8853 bits (211), Expect = 7.140e-17 Identity = 42/61 (68.85%), Postives = 50/61 (81.97%), Query Frame = 2 Query: 50 ATLHAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPVLICRNEAEKCLIETSINSLRISL 232 ATL AA+CL+NF Q VERHNKPEVE+++S ELLL PV I RNE EK LIE SINS+R+S+ Sbjct: 14 ATLQAALCLENFSSQVVERHNKPEVEVRSSKELLLQPVTISRNEKEKVLIEGSINSVRVSI 74
BLAST of EX569441 vs. SwissProt
Match: ARPC4_BOVIN (Actin-related protein 2/3 complex subunit 4 OS=Bos taurus GN=ARPC4 PE=1 SV=3) HSP 1 Score: 85.8853 bits (211), Expect = 7.140e-17 Identity = 42/61 (68.85%), Postives = 50/61 (81.97%), Query Frame = 2 Query: 50 ATLHAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPVLICRNEAEKCLIETSINSLRISL 232 ATL AA+CL+NF Q VERHNKPEVE+++S ELLL PV I RNE EK LIE SINS+R+S+ Sbjct: 14 ATLQAALCLENFSSQVVERHNKPEVEVRSSKELLLQPVTISRNEKEKVLIEGSINSVRVSI 74
BLAST of EX569441 vs. SwissProt
Match: ARPC4_CAEEL (Probable actin-related protein 2/3 complex subunit 4 OS=Caenorhabditis elegans GN=arx-6 PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 2.297e-15 Identity = 37/60 (61.67%), Postives = 49/60 (81.67%), Query Frame = 2 Query: 53 TLHAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPVLICRNEAEKCLIETSINSLRISL 232 TL AA+CL+ F Q VERHNKPEVE++TS ELL+ PV++ RN+ E+ LIE S+NS+RIS+ Sbjct: 15 TLQAALCLEQFSSQVVERHNKPEVEVQTSKELLMTPVVVARNKQERVLIEPSVNSVRISI 74
BLAST of EX569441 vs. SwissProt
Match: ARPC4_YEAST (Actin-related protein 2/3 complex subunit 4 OS=Saccharomyces cerevisiae GN=ARC19 PE=1 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 8.169e-13 Identity = 38/61 (62.30%), Postives = 48/61 (78.69%), Query Frame = 2 Query: 53 TLHAAMCLQNFPCQEVERHNKPEVEL-KTSSELLLNPVLICRNEAEKCLIETSINSLRISL 232 +L AA+ L NF QEVERHN+PEVE+ TS+ELLL P+ I RNE E+ LIE S+NS+R+SL Sbjct: 15 SLEAALTLSNFSSQEVERHNRPEVEVPNTSAELLLQPMHISRNENEQVLIEPSVNSVRMSL 75
BLAST of EX569441 vs. SwissProt
Match: ARPC4_SCHPO (Actin-related protein 2/3 complex subunit 4 OS=Schizosaccharomyces pombe GN=arc4 PE=1 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.483e-11 Identity = 30/61 (49.18%), Postives = 47/61 (77.05%), Query Frame = 2 Query: 50 ATLHAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPVLICRNEAEKCLIETSINSLRISL 232 +TL A++ L+ F + VER ++PEVE+ S E+LL P+++ RNE E+CLIE+S+NS+R S+ Sbjct: 14 STLTASLALEEFSSEIVERQSQPEVEVGRSPEILLKPLVVSRNEQEQCLIESSVNSVRFSI 74
BLAST of EX569441 vs. TAIR peptide
Match: AT4G14147.2 (| Symbols: ARPC4 | protein binding | chr4:8154062-8156246 REVERSE LENGTH=176) HSP 1 Score: 118.627 bits (296), Expect = 7.954e-29 Identity = 58/60 (96.67%), Postives = 58/60 (96.67%), Query Frame = 2 Query: 53 TLHAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPVLICRNEAEKCLIETSINSLRISL 232 TL AAMCLQNFPCQEVERHNKPEVELKTS ELLLNPVLICRNEAEKCLIETSINSLRISL Sbjct: 15 TLEAAMCLQNFPCQEVERHNKPEVELKTSPELLLNPVLICRNEAEKCLIETSINSLRISL 74 HSP 2 Score: 24.2534 bits (51), Expect = 7.954e-29 Identity = 9/12 (75.00%), Postives = 11/12 (91.67%), Query Frame = 1 Query: 22 TLRLYLTCIRNT 57 +LRLYL CI+NT Sbjct: 4 SLRLYLACIKNT 15
BLAST of EX569441 vs. TAIR peptide
Match: AT4G14147.1 (| Symbols: ARPC4 | protein binding | chr4:8154079-8156246 REVERSE LENGTH=169) HSP 1 Score: 118.627 bits (296), Expect = 7.959e-29 Identity = 58/60 (96.67%), Postives = 58/60 (96.67%), Query Frame = 2 Query: 53 TLHAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPVLICRNEAEKCLIETSINSLRISL 232 TL AAMCLQNFPCQEVERHNKPEVELKTS ELLLNPVLICRNEAEKCLIETSINSLRISL Sbjct: 15 TLEAAMCLQNFPCQEVERHNKPEVELKTSPELLLNPVLICRNEAEKCLIETSINSLRISL 74 HSP 2 Score: 24.2534 bits (51), Expect = 7.959e-29 Identity = 9/12 (75.00%), Postives = 11/12 (91.67%), Query Frame = 1 Query: 22 TLRLYLTCIRNT 57 +LRLYL CI+NT Sbjct: 4 SLRLYLACIKNT 15 The following BLAST results are available for this feature:
BLAST of EX569441 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl) Total hits: 10
BLAST of EX569441 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot) Total hits: 7
BLAST of EX569441 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide) Total hits: 2
InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EX569441 ID=EX569441; Name=EX569441; organism=Pisum sativum; type=EST; length=234bpback to top Annotated Terms
The
following terms have been associated with
this EST:
|