EX568854

EST Overview
NameEX568854
Unique NameEX568854
TypeEST
OrganismPisum sativum (pea)
Sequence length436
Libraries
Library NameType
LIBEST_021973 Pisum sativum shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Pisum sativum unigene v12010-12-29
Homology
BLAST of EX568854 vs. TrEMBL
Match: C6T539_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 8.732e-13
Identity = 40/59 (67.80%), Postives = 43/59 (72.88%), Query Frame = 3
Query:    3 GFAERPEAQDKSAEARALISRLTEEKNNAIQQISXXXXXXXXXXXXGNKNRGGVSFIFV 179
            GF ERPE+QDKSAEARALISRLTEEKNNAIQQ S             NK+RGGVSF+ V
Sbjct:  166 GFTERPESQDKSAEARALISRLTEEKNNAIQQNSKLHQELELLKEGSNKSRGGVSFVIV 224          
BLAST of EX568854 vs. TrEMBL
Match: B9SSG0_RICCO (Vesicle-associated membrane protein, putative OS=Ricinus communis GN=RCOM_1061150 PE=4 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 9.036e-10
Identity = 35/58 (60.34%), Postives = 40/58 (68.97%), Query Frame = 3
Query:    6 FAERPEAQDKSAEARALISRLTEEKNNAIQQISXXXXXXXXXXXXGNKNRGGVSFIFV 179
            F ER E QDKS+EA++LIS+L EEKNNAIQQ +            GNKNR GVSFIFV
Sbjct:  167 FGERFETQDKSSEAKSLISKLNEEKNNAIQQNNKLRQELELLKREGNKNRAGVSFIFV 224          
BLAST of EX568854 vs. TrEMBL
Match: B9GYA5_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_817160 PE=4 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 9.036e-10
Identity = 38/75 (50.67%), Postives = 43/75 (57.33%), Query Frame = 3
Query:    6 FAERPEAQDKSAEARALISRLTEEKNNAIQQISXXXXXXXXXXXXGNKNRGGVSFIFVXXXXXXXXXXXXXXKKT 230
            F ER E Q+KS EARALIS+LT+EKNNAIQQ +            GNKNRGGVS +FV              KKT
Sbjct:  167 FVERLEPQEKSLEARALISKLTDEKNNAIQQNNKLRQELELLRHQGNKNRGGVSIMFVIFVGLLGIFLGYLVKKT 241          
BLAST of EX568854 vs. TrEMBL
Match: B9RD68_RICCO (Vesicle-associated membrane protein, putative OS=Ricinus communis GN=RCOM_1610520 PE=4 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 2.461e-7
Identity = 30/58 (51.72%), Postives = 38/58 (65.52%), Query Frame = 3
Query:    6 FAERPEAQDKSAEARALISRLTEEKNNAIQQISXXXXXXXXXXXXGNKNRGGVSFIFV 179
            FAER E QD S EARALIS+LTEEKN+AIQQ               +++R G+SF++V
Sbjct:  167 FAERHEPQDNSIEARALISKLTEEKNSAIQQNKKLQQELELLRHQSSRSRSGISFVYV 224          
BLAST of EX568854 vs. TrEMBL
Match: B9MUU5_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_739862 PE=4 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 9.351e-7
Identity = 33/75 (44.00%), Postives = 38/75 (50.67%), Query Frame = 3
Query:    6 FAERPEAQDKSAEARALISRLTEEKNNAIQQISXXXXXXXXXXXXGNKNRGGVSFIFVXXXXXXXXXXXXXXKKT 230
            F E  E QDK  EA ALIS+LT+E+NNAIQQ +            GNKNR G S +FV              KKT
Sbjct:  167 FVEHLEPQDKPLEAGALISKLTDERNNAIQQNNKLRQELELLRCQGNKNRSGASLMFVIIIGLLGLLLGYLMKKT 241          
The following BLAST results are available for this feature:
BLAST of EX568854 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 5
Match NameE-valueIdentityDescription
C6T539_SOYBN8.732e-1367.80Putative uncharacterized protein OS=Glycine max PE... [more]
B9SSG0_RICCO9.036e-1060.34Vesicle-associated membrane protein, putative OS=R... [more]
B9GYA5_POPTR9.036e-1050.67Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9RD68_RICCO2.461e-751.72Vesicle-associated membrane protein, putative OS=R... [more]
B9MUU5_POPTR9.351e-744.00Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 35..46
score: NAcoord: 60..73
score

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>EX568854 ID=EX568854; Name=EX568854; organism=Pisum sativum; type=EST; length=436bp
GGGGATTTGCTGAACGACCTGAGGCTCAAGACAAATCTGCAGAGGCAAGA
GCTCTTATCTCAAGGCTGACTGAAGAAAAGAATAATGCAATTCAACAAAT
TAGCAAGCTTCGCCAGGAACTGGAGCTGCTGAAACGTGAAGGCAACAAAA
ATCGTGGTGGAGTGTCATTTATCTTTGTCATATTAATTGGCTTACTTGGC
ATAATCATGGGGTATCTCATGAAGAAGACCTAAGGATTTGGTCGATTTGG
TTTCACCATAGATTTTTACTTTATTCCTGACTATTCAAGCAATTGTGATG
AAAGTTAAAGTAGATCAATTAATCAGGTGTTGGTTTTTCTTTTGTATTAT
TCCTTGTATTTTTGGGTGGATAACAATTGAAAGTAGAAAACTTTAGGGGA
AGTTGTGGGTCTTTTGTTACTCTTAATGTGACATGC
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