EX570396

EST Overview


Name	EX570396
Unique Name	EX570396
Type	EST
Organism	Pisum sativum (pea)
Sequence length	255

Libraries


Library Name	Type
LIBEST_021973 Pisum sativum shoot apical meristem ESTs	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Pisum sativum unigene v1	Pisum sativum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Pisum sativum unigene v1	2010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Pisum sativum unigene v1	2010-12-29

Homology

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BLAST of EX570396 vs. TrEMBL
Match: C6SXY0_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 9.735e-20
Identity = 53/85 (62.35%), Postives = 58/85 (68.24%), Query Frame = 2

Query:    2 SVSHSGSINRSYHLLLESDSVTGSSHRRTRSDFQQPTSEFLEHRFGVDGVLVSP---TVTALPTTTASHATQQPSKNFNNIRNHK 247
            S SHS S NRSYH+LL S+S TGSSHRRT SDFQ PTSEFLE R+GVDG LVSP     TA P  T +    Q S N  N+RN K
Sbjct:   24 SYSHSESSNRSYHMLLASESFTGSSHRRTGSDFQPPTSEFLEQRYGVDGFLVSPRAQVTTAAPPATVNVNAAQRSNNITNMRNRK 108

The following BLAST results are available for this feature:

BLAST of EX570396 vs. TrEMBL

BLAST of EX570396 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 1


Match Name	E-value	Identity	Description
C6SXY0_SOYBN	9.735e-20	62.35	Putative uncharacterized protein OS=Glycine max PE...	[more]

InterPro

Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 44..59 score
None	No IPR available	SEG	seg	seg	coord: 5..17 score

Properties


Property Name	Value
Singlet in analysis	Pisum sativum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EX570396 ID=EX570396; Name=EX570396; organism=Pisum sativum; type=EST; length=255bp
GAGCGTCTCTCATTCTGGGAGCATAAACCGTAGCTACCACTTGCTGTTGG
AATCTGACTCCGTCACAGGATCTTCTCATAGAAGAACCAGATCTGATTTT
CAGCAACCTACAAGTGAGTTCTTGGAGCATAGATTTGGTGTTGATGGAGT
TTTGGTTAGCCCCACTGTCACAGCTCTGCCTACTACTACTGCTTCTCATG
CTACCCAACAACCCTCAAAGAATTTCAACAACATTCGCAATCACAAATGA
TGTTC

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