EX570594

EST Overview
NameEX570594
Unique NameEX570594
TypeEST
OrganismPisum sativum (pea)
Sequence length287
Libraries
Library NameType
LIBEST_021973 Pisum sativum shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs Swissprot2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
Homology
[Close]
BLAST of EX570594 vs. TrEMBL
Match: C6SYA5_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 7.691e-9
Identity = 28/30 (93.33%), Postives = 30/30 (100.00%), Query Frame = 2 
Query:    2 IKFPLVFKKIRPPTRKLKTTYKAKKPNLFM 91
            IKFPLV+KK+RPPTRKLKTTYKAKKPNLFM
Sbjct:  149 IKFPLVYKKVRPPTRKLKTTYKAKKPNLFM 178
[Close]
BLAST of EX570594 vs. TrEMBL
Match: C6T0E8_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 1.004e-8
Identity = 28/30 (93.33%), Postives = 30/30 (100.00%), Query Frame = 2 
Query:    2 IKFPLVFKKIRPPTRKLKTTYKAKKPNLFM 91
            IKFPLVF+K+RPPTRKLKTTYKAKKPNLFM
Sbjct:  149 IKFPLVFQKVRPPTRKLKTTYKAKKPNLFM 178
[Close]
BLAST of EX570594 vs. TrEMBL
Match: Q308A3_SOLTU (Putative uncharacterized protein OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 1.713e-8
Identity = 28/30 (93.33%), Postives = 29/30 (96.67%), Query Frame = 2 
Query:    2 IKFPLVFKKIRPPTRKLKTTYKAKKPNLFM 91
            IKFPLVFKK+RPPTRKLKTTYKA KPNLFM
Sbjct:  149 IKFPLVFKKVRPPTRKLKTTYKATKPNLFM 178
[Close]
BLAST of EX570594 vs. TrEMBL
Match: C6SZ28_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 1.713e-8
Identity = 28/30 (93.33%), Postives = 29/30 (96.67%), Query Frame = 2 
Query:    2 IKFPLVFKKIRPPTRKLKTTYKAKKPNLFM 91
            IKFPLVFKK+RPPTRKLKTTYKA KPNLFM
Sbjct:  149 IKFPLVFKKVRPPTRKLKTTYKATKPNLFM 178
[Close]
BLAST of EX570594 vs. TrEMBL
Match: B7FJC3_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 2.238e-8
Identity = 28/30 (93.33%), Postives = 29/30 (96.67%), Query Frame = 2 
Query:    2 IKFPLVFKKIRPPTRKLKTTYKAKKPNLFM 91
            IKFPLV+KKIRPPTR LKTTYKAKKPNLFM
Sbjct:  149 IKFPLVYKKIRPPTRSLKTTYKAKKPNLFM 178
[Close]
BLAST of EX570594 vs. TrEMBL
Match: B3TLY0_ELAGV (Ribosomal protein L18a OS=Elaeis guineensis var. tenera PE=2 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 2.238e-8
Identity = 28/30 (93.33%), Postives = 29/30 (96.67%), Query Frame = 2 
Query:    2 IKFPLVFKKIRPPTRKLKTTYKAKKPNLFM 91
            IKFPLVFKKIRPPTRKLKTTYKA +PNLFM
Sbjct:  149 IKFPLVFKKIRPPTRKLKTTYKASRPNLFM 178
[Close]
BLAST of EX570594 vs. TrEMBL
Match: D7L361_ARALY (60S ribosomal protein L18A OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_478879 PE=4 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 2.922e-8
Identity = 27/30 (90.00%), Postives = 29/30 (96.67%), Query Frame = 2 
Query:    2 IKFPLVFKKIRPPTRKLKTTYKAKKPNLFM 91
            IKFPLVF+K+RPPTRKLKTTYKA KPNLFM
Sbjct:  149 IKFPLVFRKVRPPTRKLKTTYKASKPNLFM 178
[Close]
BLAST of EX570594 vs. TrEMBL
Match: B9S129_RICCO (60S ribosomal protein L18a, putative OS=Ricinus communis GN=RCOM_0632990 PE=4 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 2.922e-8
Identity = 27/30 (90.00%), Postives = 29/30 (96.67%), Query Frame = 2 
Query:    2 IKFPLVFKKIRPPTRKLKTTYKAKKPNLFM 91
            IKFPLVFKK+RPPTRKLKTTYKA +PNLFM
Sbjct:  274 IKFPLVFKKVRPPTRKLKTTYKASRPNLFM 303
[Close]
BLAST of EX570594 vs. TrEMBL
Match: A9PDA8_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 2.922e-8
Identity = 27/30 (90.00%), Postives = 29/30 (96.67%), Query Frame = 2 
Query:    2 IKFPLVFKKIRPPTRKLKTTYKAKKPNLFM 91
            IKFPLVFKK+RPPTRKLKTTYKA +PNLFM
Sbjct:  149 IKFPLVFKKVRPPTRKLKTTYKASRPNLFM 178
[Close]
BLAST of EX570594 vs. TrEMBL
Match: A9P8B1_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_813651 PE=2 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 2.922e-8
Identity = 27/30 (90.00%), Postives = 29/30 (96.67%), Query Frame = 2 
Query:    2 IKFPLVFKKIRPPTRKLKTTYKAKKPNLFM 91
            IKFPLVFKK+RPPTRKLKTTYKA +PNLFM
Sbjct:  149 IKFPLVFKKVRPPTRKLKTTYKASRPNLFM 178
[Close]
BLAST of EX570594 vs. SwissProt
Match: R18A3_ARATH (60S ribosomal protein L18a-3 OS=Arabidopsis thaliana GN=RPL18AC PE=2 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 4.098e-9
Identity = 26/30 (86.67%), Postives = 29/30 (96.67%), Query Frame = 2 
Query:    2 IKFPLVFKKIRPPTRKLKTTYKAKKPNLFM 91
            IKFPLVF+K+RPP+RKLKTTYKA KPNLFM
Sbjct:  149 IKFPLVFRKVRPPSRKLKTTYKASKPNLFM 178
[Close]
BLAST of EX570594 vs. SwissProt
Match: R18A2_ARATH (60S ribosomal protein L18a-2 OS=Arabidopsis thaliana GN=RPL18AB PE=1 SV=2)

HSP 1 Score: 60.077 bits (144), Expect = 4.098e-9
Identity = 26/30 (86.67%), Postives = 29/30 (96.67%), Query Frame = 2 
Query:    2 IKFPLVFKKIRPPTRKLKTTYKAKKPNLFM 91
            IKFPLVF+K+RPP+RKLKTTYKA KPNLFM
Sbjct:  149 IKFPLVFRKVRPPSRKLKTTYKANKPNLFM 178
[Close]
BLAST of EX570594 vs. SwissProt
Match: RL18A_ORYSJ (60S ribosomal protein L18a OS=Oryza sativa subsp. japonica GN=RPL18A PE=2 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 2.034e-8
Identity = 24/30 (80.00%), Postives = 29/30 (96.67%), Query Frame = 2 
Query:    2 IKFPLVFKKIRPPTRKLKTTYKAKKPNLFM 91
            IKFPLV++K+RPPTRKLKTT+KA +PNLFM
Sbjct:  149 IKFPLVYRKVRPPTRKLKTTFKASRPNLFM 178
[Close]
BLAST of EX570594 vs. SwissProt
Match: RL18A_CASSA (60S ribosomal protein L18a OS=Castanea sativa GN=RPL18A PE=2 SV=1)

HSP 1 Score: 53.5286 bits (127), Expect = 3.836e-7
Identity = 24/30 (80.00%), Postives = 27/30 (90.00%), Query Frame = 2 
Query:    2 IKFPLVFKKIRPPTRKLKTTYKAKKPNLFM 91
            IKFPLV +KIRPP+RKLKT YKA +PNLFM
Sbjct:  149 IKFPLVTRKIRPPSRKLKTHYKASRPNLFM 178
[Close]
BLAST of EX570594 vs. TAIR peptide
Match: AT3G14600.1 (| Symbols: | Ribosomal protein L18ae/LX family protein | chr3:4910773-4911933 FORWARD LENGTH=178)

HSP 1 Score: 60.077 bits (144), Expect = 3.339e-10
Identity = 26/30 (86.67%), Postives = 29/30 (96.67%), Query Frame = 2 
Query:    2 IKFPLVFKKIRPPTRKLKTTYKAKKPNLFM 91
            IKFPLVF+K+RPP+RKLKTTYKA KPNLFM
Sbjct:  149 IKFPLVFRKVRPPSRKLKTTYKASKPNLFM 178
[Close]
BLAST of EX570594 vs. TAIR peptide
Match: AT2G34480.1 (| Symbols: | Ribosomal protein L18ae/LX family protein | chr2:14532916-14534161 REVERSE LENGTH=178)

HSP 1 Score: 60.077 bits (144), Expect = 3.339e-10
Identity = 26/30 (86.67%), Postives = 29/30 (96.67%), Query Frame = 2 
Query:    2 IKFPLVFKKIRPPTRKLKTTYKAKKPNLFM 91
            IKFPLVF+K+RPP+RKLKTTYKA KPNLFM
Sbjct:  149 IKFPLVFRKVRPPSRKLKTTYKANKPNLFM 178
[Close]
BLAST of EX570594 vs. TAIR peptide
Match: AT1G29970.2 (| Symbols: RPL18AA | 60S ribosomal protein L18A-1 | chr1:10498458-10501311 REVERSE LENGTH=312)

HSP 1 Score: 60.077 bits (144), Expect = 3.339e-10
Identity = 26/30 (86.67%), Postives = 29/30 (96.67%), Query Frame = 2 
Query:    2 IKFPLVFKKIRPPTRKLKTTYKAKKPNLFM 91
            IKFPLVF+K+RPPTRKLKTT+KA KPNLFM
Sbjct:  283 IKFPLVFRKVRPPTRKLKTTFKANKPNLFM 312
[Close]
BLAST of EX570594 vs. TAIR peptide
Match: AT1G29965.1 (| Symbols: | Ribosomal protein L18ae/LX family protein | chr1:10498458-10499373 REVERSE LENGTH=178)

HSP 1 Score: 60.077 bits (144), Expect = 3.339e-10
Identity = 26/30 (86.67%), Postives = 29/30 (96.67%), Query Frame = 2 
Query:    2 IKFPLVFKKIRPPTRKLKTTYKAKKPNLFM 91
            IKFPLVF+K+RPPTRKLKTT+KA KPNLFM
Sbjct:  149 IKFPLVFRKVRPPTRKLKTTFKANKPNLFM 178
The following BLAST results are available for this feature:
BLAST of EX570594 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
C6SYA5_SOYBN7.691e-993.33Putative uncharacterized protein OS=Glycine max PE... [more]
C6T0E8_SOYBN1.004e-893.33Putative uncharacterized protein OS=Glycine max PE... [more]
Q308A3_SOLTU1.713e-893.33Putative uncharacterized protein OS=Solanum tubero... [more]
C6SZ28_SOYBN1.713e-893.33Putative uncharacterized protein OS=Glycine max PE... [more]
B7FJC3_MEDTR2.238e-893.33Putative uncharacterized protein OS=Medicago trunc... [more]
B3TLY0_ELAGV2.238e-893.33Ribosomal protein L18a OS=Elaeis guineensis var. t... [more]
D7L361_ARALY2.922e-890.0060S ribosomal protein L18A OS=Arabidopsis lyrata s... [more]
B9S129_RICCO2.922e-890.0060S ribosomal protein L18a, putative OS=Ricinus co... [more]
A9PDA8_POPTR2.922e-890.00Putative uncharacterized protein OS=Populus tricho... [more]
A9P8B1_POPTR2.922e-890.00Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
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BLAST of EX570594 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 4
Match NameE-valueIdentityDescription
R18A3_ARATH4.098e-986.6760S ribosomal protein L18a-3 OS=Arabidopsis thalia... [more]
R18A2_ARATH4.098e-986.6760S ribosomal protein L18a-2 OS=Arabidopsis thalia... [more]
RL18A_ORYSJ2.034e-880.0060S ribosomal protein L18a OS=Oryza sativa subsp. ... [more]
RL18A_CASSA3.836e-780.0060S ribosomal protein L18a OS=Castanea sativa GN=R... [more]
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BLAST of EX570594 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 4
Match NameE-valueIdentityDescription
AT3G14600.13.339e-1086.67| Symbols: | Ribosomal protein L18ae/LX family pr... [more]
AT2G34480.13.339e-1086.67| Symbols: | Ribosomal protein L18ae/LX family pr... [more]
AT1G29970.23.339e-1086.67| Symbols: RPL18AA | 60S ribosomal protein L18A-1 ... [more]
AT1G29965.13.339e-1086.67| Symbols: | Ribosomal protein L18ae/LX family pr... [more]
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Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>EX570594 ID=EX570594; Name=EX570594; organism=Pisum sativum; type=EST; length=287bp
GATCAAGTTCCCATTGGTTTTCAAGAAAATCAGACCACCAACAAGGAAGC
TCAAGACCACATACAAGGCCAAGAAGCCCAACTTGTTTATGTAATGTGGT
TGAGTGTTGAAAGTATCTAGGTTATCTTCAAACATTTCTGTTGTTTATCT
ATTGCCTGATTTTGCTATGAGGATGTTTAGACCATTTTTGGTTTCAAATA
TTTTTATTTGTGTTGGATATTTTCCCAATTTTGGAGTAGAATTTGACTTA
TTTATATTACTGTCAATCTAAAGACCATACTTGCTTG
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