FG532840

EST Overview


Name	FG532840
Unique Name	FG532840
Type	EST
Organism	Pisum sativum (pea)
Sequence length	335

Libraries


Library Name	Type
LIBEST_023217 MeriP Pisum sativum Shoot apical meristem ESTs	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Pisum sativum unigene v1	Pisum sativum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Pisum sativum unigene v1	2010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide	2011-02-03
InterProScan analysis for Pisum sativum unigene v1	2010-12-29

Homology

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BLAST of FG532840 vs. TrEMBL
Match: B9H0U7_POPTR (Chromatin remodeling complex subunit (Fragment) OS=Populus trichocarpa GN=CHR937 PE=4 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 3.114e-42
Identity = 88/111 (79.28%), Postives = 97/111 (87.39%), Query Frame = 2

Query:    2 VKSKFFRNMLNLCESTGEKLLVFSQYLLPLKYLERLAIKWKEWSIGKEIFVISGETLPEQRECSMEMFNNSSDAKVFFGSIKACGEGISLVGASRVIILDVHLNPSVTRQA 334
            VK+KFF N+L+LCES GEKLLVFSQYL PLK+LERL +K K W +GKEIFVISGE+  + RE SME FNNS DAKVFFGSIKACGEGISLVGASR+IILDVHLNPSVT QA
Sbjct:  436 VKAKFFLNILSLCESAGEKLLVFSQYLTPLKFLERLVMKVKGWILGKEIFVISGESSSDHREWSMERFNNSMDAKVFFGSIKACGEGISLVGASRIIILDVHLNPSVTCQA 546

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BLAST of FG532840 vs. TrEMBL
Match: D7U5L1_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_38.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00024225001 PE=4 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 6.938e-42
Identity = 87/111 (78.38%), Postives = 98/111 (88.29%), Query Frame = 2

Query:    2 VKSKFFRNMLNLCESTGEKLLVFSQYLLPLKYLERLAIKWKEWSIGKEIFVISGETLPEQRECSMEMFNNSSDAKVFFGSIKACGEGISLVGASRVIILDVHLNPSVTRQA 334
            VK+KFF N+L LC+S+GEKLLVFSQYLLPL++LE+L +K K WS GKEIF ISGE+  EQRE SME FN S DA+VFFGSIKACGEGISLVGASRV+ILDVHLNPSVTRQA
Sbjct:  656 VKAKFFLNVLALCQSSGEKLLVFSQYLLPLRFLEKLTMKVKGWSPGKEIFAISGESSSEQREWSMERFNTSPDARVFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQA 766

[Close]

BLAST of FG532840 vs. TrEMBL
Match: A5AV95_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_015925 PE=4 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 6.938e-42
Identity = 87/111 (78.38%), Postives = 98/111 (88.29%), Query Frame = 2

Query:    2 VKSKFFRNMLNLCESTGEKLLVFSQYLLPLKYLERLAIKWKEWSIGKEIFVISGETLPEQRECSMEMFNNSSDAKVFFGSIKACGEGISLVGASRVIILDVHLNPSVTRQA 334
            VK+KFF N+L LC+S+GEKLLVFSQYLLPL++LE+L +K K WS GKEIF ISGE+  EQRE SME FN S DA+VFFGSIKACGEGISLVGASRV+ILDVHLNPSVTRQA
Sbjct:  935 VKAKFFLNVLALCQSSGEKLLVFSQYLLPLRFLEKLTMKVKGWSPGKEIFAISGESSSEQREWSMERFNTSPDARVFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQA 1045

[Close]

BLAST of FG532840 vs. TrEMBL
Match: B9P679_POPTR (Putative uncharacterized protein OS=Populus trichocarpa GN=POPTRDRAFT_592433 PE=4 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 2.019e-41
Identity = 85/110 (77.27%), Postives = 97/110 (88.18%), Query Frame = 2

Query:    5 KSKFFRNMLNLCESTGEKLLVFSQYLLPLKYLERLAIKWKEWSIGKEIFVISGETLPEQRECSMEMFNNSSDAKVFFGSIKACGEGISLVGASRVIILDVHLNPSVTRQA 334
            K+KFF N+L+LC+S GEKLLVFSQYL PLK+LERL +K K W +GK+IFVISGE+  + RE SM+ FNNS DAKVFFGSIKACGEGISLVGASR+IILDVHLNPSVTRQA
Sbjct:  148 KAKFFLNILSLCKSAGEKLLVFSQYLTPLKFLERLVMKVKGWILGKDIFVISGESSSDHREWSMDRFNNSIDAKVFFGSIKACGEGISLVGASRIIILDVHLNPSVTRQA 257

[Close]

BLAST of FG532840 vs. TrEMBL
Match: Q9SIW2_ARATH (Putative uncharacterized protein At2g16390 OS=Arabidopsis thaliana GN=At2g16390 PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 2.637e-41
Identity = 83/111 (74.77%), Postives = 97/111 (87.39%), Query Frame = 2

Query:    2 VKSKFFRNMLNLCESTGEKLLVFSQYLLPLKYLERLAIKWKEWSIGKEIFVISGETLPEQRECSMEMFNNSSDAKVFFGSIKACGEGISLVGASRVIILDVHLNPSVTRQA 334
            VK+KFF N++NLC+S GEKLLVFSQYL+PLK+LERLA   K W +GKE+FV++G T  EQRE SME FN+S DAK+FFGSIKACGEGISLVGASR++ILDV LNPSVTRQA
Sbjct:  694 VKAKFFLNLINLCDSAGEKLLVFSQYLIPLKFLERLAALAKGWKLGKEVFVLTGNTSSEQREWSMETFNSSPDAKIFFGSIKACGEGISLVGASRILILDVPLNPSVTRQA 804

[Close]

BLAST of FG532840 vs. TrEMBL
Match: D7LBD5_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_481010 PE=4 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 4.972e-40
Identity = 83/111 (74.77%), Postives = 95/111 (85.59%), Query Frame = 2

Query:    2 VKSKFFRNMLNLCESTGEKLLVFSQYLLPLKYLERLAIKWKEWSIGKEIFVISGETLPEQRECSMEMFNNSSDAKVFFGSIKACGEGISLVGASRVIILDVHLNPSVTRQA 334
            VK KFF N+L LCESTGEKLLVFSQY++P+K LERL    K W +GKE+F I+G++  EQRE SME FNNS +AKVFFGSIKACGEGISLVGASRV+ILDVHLNPSVT+QA
Sbjct:  606 VKMKFFLNLLALCESTGEKLLVFSQYIVPIKTLERLMSSMKGWRLGKEMFTITGDSSNEQREWSMERFNNSPEAKVFFGSIKACGEGISLVGASRVLILDVHLNPSVTQQA 716

[Close]

BLAST of FG532840 vs. TrEMBL
Match: Q9SJT3_ARATH (Putative uncharacterized protein At2g21450 OS=Arabidopsis thaliana GN=At2g21450 PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 6.494e-40
Identity = 83/111 (74.77%), Postives = 95/111 (85.59%), Query Frame = 2

Query:    2 VKSKFFRNMLNLCESTGEKLLVFSQYLLPLKYLERLAIKWKEWSIGKEIFVISGETLPEQRECSMEMFNNSSDAKVFFGSIKACGEGISLVGASRVIILDVHLNPSVTRQA 334
            VK KFF N+L LCESTGEKLLVFSQY++P+K LERL    K W +GKE+F I+G++  EQRE SME FNNS +AKVFFGSIKACGEGISLVGASRV+ILDVHLNPSVT+QA
Sbjct:  620 VKMKFFLNLLALCESTGEKLLVFSQYIVPIKTLERLMSSMKGWRLGKEMFTITGDSSNEQREWSMERFNNSLEAKVFFGSIKACGEGISLVGASRVLILDVHLNPSVTQQA 730

[Close]

BLAST of FG532840 vs. TrEMBL
Match: Q6Z3W1_ORYSJ (Putative SNF2 domain/helicase domain-containing protein OS=Oryza sativa subsp. japonica GN=P0673E01.20 PE=4 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 1.447e-39
Identity = 81/111 (72.97%), Postives = 95/111 (85.59%), Query Frame = 2

Query:    2 VKSKFFRNMLNLCESTGEKLLVFSQYLLPLKYLERLAIKWKEWSIGKEIFVISGETLPEQRECSMEMFNNSSDAKVFFGSIKACGEGISLVGASRVIILDVHLNPSVTRQA 334
            VK+KFF N+L+L  S GEKLL FSQY+LP+K+LERL +K   W +GKEIF+ISG+T  + RE +M+ FNNS+DAKV FGSIKACGEGISLVGASRVIILDVHLNPSVTRQA
Sbjct:  678 VKAKFFFNILSLANSAGEKLLAFSQYILPMKFLERLLVKRLGWHVGKEIFMISGDTSADDREVAMDQFNNSADAKVLFGSIKACGEGISLVGASRVIILDVHLNPSVTRQA 788

[Close]

BLAST of FG532840 vs. TrEMBL
Match: Q652G9_ORYSJ (Os06g0255700 protein OS=Oryza sativa subsp. japonica GN=P0624H09.1 PE=4 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 1.447e-39
Identity = 81/111 (72.97%), Postives = 95/111 (85.59%), Query Frame = 2

Query:    2 VKSKFFRNMLNLCESTGEKLLVFSQYLLPLKYLERLAIKWKEWSIGKEIFVISGETLPEQRECSMEMFNNSSDAKVFFGSIKACGEGISLVGASRVIILDVHLNPSVTRQA 334
            VK+KFF N+L+L  S GEKLL FSQY+LP+K+LERL +K   W +GKEIF+ISG+T  + RE +M+ FNNS+DAKV FGSIKACGEGISLVGASRVIILDVHLNPSVTRQA
Sbjct:  752 VKAKFFFNILSLANSAGEKLLAFSQYILPMKFLERLLVKRLGWHVGKEIFMISGDTSADDREVAMDQFNNSADAKVLFGSIKACGEGISLVGASRVIILDVHLNPSVTRQA 862

[Close]

BLAST of FG532840 vs. TrEMBL
Match: Q0D6W2_ORYSJ (Os07g0434500 protein OS=Oryza sativa subsp. japonica GN=Os07g0434500 PE=4 SV=2)

HSP 1 Score: 165.622 bits (418), Expect = 1.447e-39
Identity = 81/111 (72.97%), Postives = 95/111 (85.59%), Query Frame = 2

Query:    2 VKSKFFRNMLNLCESTGEKLLVFSQYLLPLKYLERLAIKWKEWSIGKEIFVISGETLPEQRECSMEMFNNSSDAKVFFGSIKACGEGISLVGASRVIILDVHLNPSVTRQA 334
            VK+KFF N+L+L  S GEKLL FSQY+LP+K+LERL +K   W +GKEIF+ISG+T  + RE +M+ FNNS+DAKV FGSIKACGEGISLVGASRVIILDVHLNPSVTRQA
Sbjct:  715 VKAKFFFNILSLANSAGEKLLAFSQYILPMKFLERLLVKRLGWHVGKEIFMISGDTSADDREVAMDQFNNSADAKVLFGSIKACGEGISLVGASRVIILDVHLNPSVTRQA 825

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BLAST of FG532840 vs. SwissProt
Match: ATRX_DROME (Transcriptional regulator ATRX homolog OS=Drosophila melanogaster GN=XNP PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 1.995e-11
Identity = 45/122 (36.89%), Postives = 62/122 (50.82%), Query Frame = 2

Query:   26 MLNLCESTGEKLLVFSQYLLPLKYLERLAIKWKE-----------------WSIGKEIFVISGETLPEQRECSMEMFNNSSD--AKVFFGSIKACGEGISLVGASRVIILDVHLNPSVTRQA 334
            +L  CE+ G+KLLVFSQ L  L  +E                         W+ GK+ F + G    EQRE   + FNN ++  A++F  S +A G GI+LV A+RV+I DV  NPS   Q+
Sbjct:  906 LLQQCEAIGDKLLVFSQSLQSLDVIEHFLSLVDSNTKNYEFEGDVGDFKGCWTSGKDYFRLDGSCSVEQREAMCKQFNNITNLRARLFLISTRAGGLGINLVAANRVVIFDVSWNPSHDTQS 1027

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BLAST of FG532840 vs. SwissProt
Match: YFK8_YEAST (Uncharacterized ATP-dependent helicase YFR038W OS=Saccharomyces cerevisiae GN=YFR038W PE=2 SV=2)

HSP 1 Score: 53.5286 bits (127), Expect = 3.893e-7
Identity = 36/98 (36.73%), Postives = 52/98 (53.06%), Query Frame = 2

Query:   44 STGEKLLVFSQYLLPLKYLERLAIKWKEWSIGKEIFVISGETLPEQRECSMEMFNNSSDA-KVFFGSIKACGEGISLVGASRVIILDVHLNPSVTRQA 334
            S G K+L++SQ++  L  +E     W + +     F I G    E R+  +E FN+S D   +F  S +A G GI+LVGA  V++ D   NP V  QA
Sbjct:  617 SEGHKVLIYSQFVNMLDLIE----DWCDLN-SFATFRIDGSVNNETRKDQLEKFNSSKDKHNIFLLSTRAAGLGINLVGADTVVLFDSDWNPQVDLQA 709

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BLAST of FG532840 vs. SwissProt
Match: HEPF1_PLAF7 (Probable ATP-dependent helicase PF08_0048 OS=Plasmodium falciparum (isolate 3D7) GN=PF08_0048 PE=3 SV=1)

HSP 1 Score: 53.5286 bits (127), Expect = 3.893e-7
Identity = 33/103 (32.04%), Postives = 54/103 (52.43%), Query Frame = 2

Query:   26 MLNLCESTGEKLLVFSQYLLPLKYLERLAIKWKEWSIGKEIFVISGETLPEQRECSMEMFNNSSDAKVFFGSIKACGEGISLVGASRVIILDVHLNPSVTRQA 334
            +L+ C+  G K L+F+Q++  L  LE + +    +S  +    + G T  EQR+  +  FNN     +F  S ++   GI+L  A+ VI  D   NPS+ +QA
Sbjct: 1776 LLSKCKREGNKCLLFTQFIKMLDILE-IFLNHLNYSFIR----LDGSTKVEQRQKIVTKFNNDKSIFIFISSTRSGSIGINLTAANVVIFYDTDWNPSIDKQA 1873

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BLAST of FG532840 vs. SwissProt
Match: ATRX_PONPY (Transcriptional regulator ATRX OS=Pongo pygmaeus GN=ATRX PE=2 SV=1)

HSP 1 Score: 53.1434 bits (126), Expect = 5.084e-7
Identity = 40/122 (32.79%), Postives = 61/122 (50.00%), Query Frame = 2

Query:   26 MLNLCESTGEKLLVFSQYLLPLKYLE---RLAIKWK--------------EWSIGKEIFVISGETLPEQRECSMEMFNNSSDAK--VFFGSIKACGEGISLVGASRVIILDVHLNPSVTRQA 334
            +L + E  G+K+LVFSQ L+ L  +E    LA + K              +W    + + + G T  + R+   E FN+ ++ +  +F  S KA   GI+LV A+RVII D   NPS   Q+
Sbjct: 2026 ILRMAEEIGDKVLVFSQSLISLDLIEDFLELASREKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVAANRVIIFDASWNPSYDIQS 2147

[Close]

BLAST of FG532840 vs. SwissProt
Match: ATRX_PANTR (Transcriptional regulator ATRX OS=Pan troglodytes GN=ATRX PE=2 SV=1)

HSP 1 Score: 53.1434 bits (126), Expect = 5.084e-7
Identity = 40/122 (32.79%), Postives = 61/122 (50.00%), Query Frame = 2

Query:   26 MLNLCESTGEKLLVFSQYLLPLKYLE---RLAIKWK--------------EWSIGKEIFVISGETLPEQRECSMEMFNNSSDAK--VFFGSIKACGEGISLVGASRVIILDVHLNPSVTRQA 334
            +L + E  G+K+LVFSQ L+ L  +E    LA + K              +W    + + + G T  + R+   E FN+ ++ +  +F  S KA   GI+LV A+RVII D   NPS   Q+
Sbjct: 2026 ILRMAEEIGDKVLVFSQSLISLDLIEDFLELASREKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVAANRVIIFDASWNPSYDIQS 2147

[Close]

BLAST of FG532840 vs. SwissProt
Match: ATRX_HUMAN (Transcriptional regulator ATRX OS=Homo sapiens GN=ATRX PE=1 SV=4)

HSP 1 Score: 53.1434 bits (126), Expect = 5.084e-7
Identity = 40/122 (32.79%), Postives = 61/122 (50.00%), Query Frame = 2

Query:   26 MLNLCESTGEKLLVFSQYLLPLKYLE---RLAIKWK--------------EWSIGKEIFVISGETLPEQRECSMEMFNNSSDAK--VFFGSIKACGEGISLVGASRVIILDVHLNPSVTRQA 334
            +L + E  G+K+LVFSQ L+ L  +E    LA + K              +W    + + + G T  + R+   E FN+ ++ +  +F  S KA   GI+LV A+RVII D   NPS   Q+
Sbjct: 2026 ILRMAEEIGDKVLVFSQSLISLDLIEDFLELASREKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVAANRVIIFDASWNPSYDIQS 2147

[Close]

BLAST of FG532840 vs. SwissProt
Match: ATRX_MOUSE (Transcriptional regulator ATRX OS=Mus musculus GN=Atrx PE=1 SV=2)

HSP 1 Score: 52.373 bits (124), Expect = 8.672e-7
Identity = 40/122 (32.79%), Postives = 61/122 (50.00%), Query Frame = 2

Query:   26 MLNLCESTGEKLLVFSQYLLPLKYLE---RLAIKWK--------------EWSIGKEIFVISGETLPEQRECSMEMFNNSSDAK--VFFGSIKACGEGISLVGASRVIILDVHLNPSVTRQA 334
            +L + E  G+K+LVFSQ L+ L  +E    LA + K              +W    + + + G T  + R+   E FN+ ++ +  +F  S KA   GI+LV A+RVII D   NPS   Q+
Sbjct: 2009 ILRMAEEIGDKVLVFSQSLISLDLIEDFLELASREKTEDKEKPLIYKGEGKWIRNIDYYRLDGSTNAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVAANRVIIFDASWNPSYDIQS 2130

[Close]

BLAST of FG532840 vs. SwissProt
Match: ARIP4_XENTR (Helicase ARIP4 OS=Xenopus tropicalis GN=rad54l2 PE=2 SV=1)

HSP 1 Score: 52.373 bits (124), Expect = 8.672e-7
Identity = 36/110 (32.73%), Postives = 52/110 (47.27%), Query Frame = 2

Query:   50 GEKLLVFSQYLLPLKYLERLAIKWK-------------EWSIGKEIFVISGETLPEQRECSMEMFNNSSDAKV--FFGSIKACGEGISLVGASRVIILDVHLNPSVTRQA 334
            G+K+LVFSQ L  L  +E    K K              W      + + G T   +RE  +  FN+ S+ KV  F  S +A   G++L+GA+RV++ D   NP    QA
Sbjct:  732 GDKILVFSQSLSTLSIMEEFLAKRKMPIPAGSDGQEGHTWIRNVNYYRLDGSTSASERERLINQFNDPSNEKVWLFLLSTRAGCLGVNLIGANRVVVFDASWNPCHDAQA 841

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BLAST of FG532840 vs. TAIR peptide
Match: AT2G16390.1 (| Symbols: DRD1, CHR35, DMS1 | SNF2 domain-containing protein / helicase domain-containing protein | chr2:7097638-7101182 FORWARD LENGTH=888)

HSP 1 Score: 171.4 bits (433), Expect = 1.016e-43
Identity = 83/111 (74.77%), Postives = 97/111 (87.39%), Query Frame = 2

Query:    2 VKSKFFRNMLNLCESTGEKLLVFSQYLLPLKYLERLAIKWKEWSIGKEIFVISGETLPEQRECSMEMFNNSSDAKVFFGSIKACGEGISLVGASRVIILDVHLNPSVTRQA 334
            VK+KFF N++NLC+S GEKLLVFSQYL+PLK+LERLA   K W +GKE+FV++G T  EQRE SME FN+S DAK+FFGSIKACGEGISLVGASR++ILDV LNPSVTRQA
Sbjct:  694 VKAKFFLNLINLCDSAGEKLLVFSQYLIPLKFLERLAALAKGWKLGKEVFVLTGNTSSEQREWSMETFNSSPDAKIFFGSIKACGEGISLVGASRILILDVPLNPSVTRQA 804

[Close]

BLAST of FG532840 vs. TAIR peptide
Match: AT2G21450.1 (| Symbols: CHR34 | chromatin remodeling 34 | chr2:9179622-9182356 REVERSE LENGTH=816)

HSP 1 Score: 166.777 bits (421), Expect = 2.504e-42
Identity = 83/111 (74.77%), Postives = 95/111 (85.59%), Query Frame = 2

Query:    2 VKSKFFRNMLNLCESTGEKLLVFSQYLLPLKYLERLAIKWKEWSIGKEIFVISGETLPEQRECSMEMFNNSSDAKVFFGSIKACGEGISLVGASRVIILDVHLNPSVTRQA 334
            VK KFF N+L LCESTGEKLLVFSQY++P+K LERL    K W +GKE+F I+G++  EQRE SME FNNS +AKVFFGSIKACGEGISLVGASRV+ILDVHLNPSVT+QA
Sbjct:  620 VKMKFFLNLLALCESTGEKLLVFSQYIVPIKTLERLMSSMKGWRLGKEMFTITGDSSNEQREWSMERFNNSLEAKVFFGSIKACGEGISLVGASRVLILDVHLNPSVTQQA 730

[Close]

BLAST of FG532840 vs. TAIR peptide
Match: AT1G05490.1 (| Symbols: chr31 | chromatin remodeling 31 | chr1:1618795-1623195 REVERSE LENGTH=1410)

HSP 1 Score: 102.834 bits (255), Expect = 4.440e-23
Identity = 55/112 (49.11%), Postives = 75/112 (66.96%), Query Frame = 2

Query:    2 VKSKFFRNMLNLCESTGEKLLVFSQYLLPLKYLERLAIKWKEWSIGKEIFVISGETLPEQRECSMEMFNN-SSDAKVFFGSIKACGEGISLVGASRVIILDVHLNPSVTRQA 334
            VK++F    + LCE   EK+LVFSQY+ PLK + +  +   +W+ G+E+  + G+   +QR+  +  FN+  S AKVF  S KAC EGISLVGASRVI+LDV  NP+V RQA
Sbjct: 1199 VKTRFLMEFVELCEVIKEKVLVFSQYIDPLKLIMKHLVSRFKWNPGEEVLYMHGKLEQKQRQTLINEFNDPKSKAKVFLASTKACSEGISLVGASRVILLDVVWNPAVERQA 1310

[Close]

BLAST of FG532840 vs. TAIR peptide
Match: AT3G24340.1 (| Symbols: chr40 | chromatin remodeling 40 | chr3:8832085-8835722 REVERSE LENGTH=1132)

HSP 1 Score: 87.8113 bits (216), Expect = 1.478e-18
Identity = 49/112 (43.75%), Postives = 70/112 (62.50%), Query Frame = 2

Query:    2 VKSKFFRNMLNLCESTGEKLLVFSQYLLPLKYLERLAIKWKEWSIGKEIFVISGETLPEQRECSMEMFNN-SSDAKVFFGSIKACGEGISLVGASRVIILDVHLNPSVTRQA 334
            VK+KF  + + +  +  EK+LV+SQY+  LK +    I   +W+ G++I ++ G+     R+  ++ FN   S +KV   S KAC EGISLVGASRV+ILDV  NPSV  QA
Sbjct:  927 VKTKFLIDFIRISGTVKEKVLVYSQYIDTLKLIMEQLIAECDWTEGEQILLMHGKVEQRDRQHMIDNFNKPDSGSKVLLASTKACSEGISLVGASRVVILDVVWNPSVESQA 1038

[Close]

BLAST of FG532840 vs. TAIR peptide
Match: AT5G20420.1 (| Symbols: CHR42 | chromatin remodeling 42 | chr5:6899015-6903266 REVERSE LENGTH=1261)

HSP 1 Score: 64.6994 bits (156), Expect = 1.340e-11
Identity = 36/95 (37.89%), Postives = 53/95 (55.79%), Query Frame = 2

Query:   53 EKLLVFSQYLLPLKYLERLAIKWKEWSIGKEIFVISGETLPEQRECSMEMFNNSSD-AKVFFGSIKACGEGISLVGASRVIILDVHLNPSVTRQA 334
            EK+L+F   + P++    L      W  G+EI  ++G+    +R   ++ F    + ++V   SI AC EGISL  ASRVI+LD   NPS T+QA
Sbjct: 1079 EKILIFCHNIAPIRMFTELFENIFRWQRGREILTLTGDLELFERGRVIDKFEEPGNPSRVLLASITACAEGISLTAASRVIMLDSEWNPSKTKQA 1173

[Close]

BLAST of FG532840 vs. TAIR peptide
Match: AT3G42670.1 (| Symbols: CHR38, CLSY | chromatin remodeling 38 | chr3:14755906-14760085 REVERSE LENGTH=1256)

HSP 1 Score: 63.1586 bits (152), Expect = 3.898e-11
Identity = 35/95 (36.84%), Postives = 52/95 (54.74%), Query Frame = 2

Query:   53 EKLLVFSQYLLPLKYLERLAIKWKEWSIGKEIFVISGETLPEQRECSMEMFNN-SSDAKVFFGSIKACGEGISLVGASRVIILDVHLNPSVTRQA 334
            EK+L+F   + P++    L      W  G+E+  ++G+    +R   ++ F      ++V   SI AC EGISL  ASRVI+LD   NPS T+QA
Sbjct: 1073 EKILIFCHNIAPIRLFLELFENVFRWKRGRELLTLTGDLELFERGRVIDKFEEPGGQSRVLLASITACAEGISLTAASRVIMLDSEWNPSKTKQA 1167

[Close]

BLAST of FG532840 vs. TAIR peptide
Match: AT2G02090.1 (| Symbols: CHR19, CHA19, ETL1 | SNF2 domain-containing protein / helicase domain-containing protein | chr2:523481-526884 FORWARD LENGTH=763)

HSP 1 Score: 55.4546 bits (132), Expect = 8.129e-9
Identity = 35/110 (31.82%), Postives = 53/110 (48.18%), Query Frame = 2

Query:    5 KSKFFRNMLNLCESTGEKLLVFSQYLLPLKYLERLAIKWKEWSIGKEIFVISGETLPEQRECSMEMFNNSSDAKVFFGSIKACGEGISLVGASRVIILDVHLNPSVTRQA 334
            K +    +L   + +G ++L+FSQ+   L  LE     W    IG     + G T    R+  ++ FNN         S +A G+G++L GA  VII D+  NP + RQA
Sbjct:  589 KCRTLAELLPSMKKSGHRVLIFSQWTSMLDILE-----WTLDVIGVTYRRLDGSTQVTDRQTIVDTFNNDKSIFACLLSTRAGGQGLNLTGADTVIIHDMDFNPQIDRQA 693

[Close]

BLAST of FG532840 vs. TAIR peptide
Match: AT1G03750.1 (| Symbols: CHR9 | switch 2 | chr1:937920-941068 FORWARD LENGTH=862)

HSP 1 Score: 55.4546 bits (132), Expect = 8.129e-9
Identity = 37/97 (38.14%), Postives = 55/97 (56.70%), Query Frame = 2

Query:   44 STGEKLLVFSQYLLPLKYLERLAIKWKEWSIGKEIFVISGETLPEQRECSMEMFNNSSDAKVFFGSIKACGEGISLVGASRVIILDVHLNPSVTRQA 334
            S G+K+L+FS  +  L  LE+  I+ K +S  +    + G T    R+  ++ FN S   +VF  S KA G G++LV A+RV+I D + NPS   QA
Sbjct:  542 SKGDKILLFSYSVRMLDILEKFLIR-KGYSFAR----LDGSTPTNLRQSLVDDFNASPSKQVFLISTKAGGLGLNLVSANRVVIFDPNWNPSHDLQA 633

[Close]

BLAST of FG532840 vs. TAIR peptide
Match: AT2G18760.1 (| Symbols: CHR8 | chromatin remodeling 8 | chr2:8129154-8133502 FORWARD LENGTH=1187)

HSP 1 Score: 55.0694 bits (131), Expect = 1.062e-8
Identity = 40/110 (36.36%), Postives = 56/110 (50.91%), Query Frame = 2

Query:    5 KSKFFRNMLNLCESTGEKLLVFSQYLLPLKYLERLAIKWKEWSIGKEIFVISGETLPEQRECSMEMFNNSSDAKVFFGSIKACGEGISLVGASRVIILDVHLNPSVTRQA 334
            K K    +L + +  G ++L+FSQ    L  LE   +   E+S  +    + G T  +QR   ++ FNNS D  VF  + K  G G +L GA+RVII D   NPS   QA
Sbjct:  728 KMKVVAEVLKVWKQQGHRVLLFSQTQQMLDILESFLVA-NEYSYRR----MDGLTPVKQRMALIDEFNNSEDMFVFVLTTKVGGLGTNLTGANRVIIFDPDWNPSNDMQA 832

[Close]

BLAST of FG532840 vs. TAIR peptide
Match: AT1G08600.2 (| Symbols: ATRX | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr1:2724562-2733431 FORWARD LENGTH=1479)

HSP 1 Score: 51.6026 bits (122), Expect = 1.174e-7
Identity = 37/113 (32.74%), Postives = 59/113 (52.21%), Query Frame = 2

Query:   23 NMLNLCESTGEKLLVFSQYLLPLKYLE-------RLAIKWKEWSIGKEIFVISGETLPEQRECSMEMFNNSSDAKV--FFGSIKACGEGISLVGASRVIILDVHLNPSVTRQA 334
            ++L++    G+K LVFSQ +  L  +E       R   + K W  GK+ + I G+T   +R+  ++ FN   + +V     S +A   GI+L  A+RVII+D   NP+   QA
Sbjct: 1122 DILSMSADVGDKALVFSQSIPTLDLIELYLSRVPRHGKQGKFWKKGKDWYRIDGKTESSERQKLVDRFNEPDNKRVKCTLISTRAGSLGINLYAANRVIIVDGSWNPTYDLQA 1234

The following BLAST results are available for this feature:

BLAST of FG532840 vs. TrEMBL
BLAST of FG532840 vs. SwissProt
BLAST of FG532840 vs. TAIR peptide

BLAST of FG532840 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B9H0U7_POPTR	3.114e-42	79.28	Chromatin remodeling complex subunit (Fragment) OS...	[more]
D7U5L1_VITVI	6.938e-42	78.38	Whole genome shotgun sequence of line PN40024, sca...	[more]
A5AV95_VITVI	6.938e-42	78.38	Putative uncharacterized protein OS=Vitis vinifera...	[more]
B9P679_POPTR	2.019e-41	77.27	Putative uncharacterized protein OS=Populus tricho...	[more]
Q9SIW2_ARATH	2.637e-41	74.77	Putative uncharacterized protein At2g16390 OS=Arab...	[more]
D7LBD5_ARALY	4.972e-40	74.77	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
Q9SJT3_ARATH	6.494e-40	74.77	Putative uncharacterized protein At2g21450 OS=Arab...	[more]
Q6Z3W1_ORYSJ	1.447e-39	72.97	Putative SNF2 domain/helicase domain-containing pr...	[more]
Q652G9_ORYSJ	1.447e-39	72.97	Os06g0255700 protein OS=Oryza sativa subsp. japoni...	[more]
Q0D6W2_ORYSJ	1.447e-39	72.97	Os07g0434500 protein OS=Oryza sativa subsp. japoni...	[more]

BLAST of FG532840 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 8


Match Name	E-value	Identity	Description
ATRX_DROME	1.995e-11	36.89	Transcriptional regulator ATRX homolog OS=Drosophi...	[more]
YFK8_YEAST	3.893e-7	36.73	Uncharacterized ATP-dependent helicase YFR038W OS=...	[more]
HEPF1_PLAF7	3.893e-7	32.04	Probable ATP-dependent helicase PF08_0048 OS=Plasm...	[more]
ATRX_PONPY	5.084e-7	32.79	Transcriptional regulator ATRX OS=Pongo pygmaeus G...	[more]
ATRX_PANTR	5.084e-7	32.79	Transcriptional regulator ATRX OS=Pan troglodytes ...	[more]
ATRX_HUMAN	5.084e-7	32.79	Transcriptional regulator ATRX OS=Homo sapiens GN=...	[more]
ATRX_MOUSE	8.672e-7	32.79	Transcriptional regulator ATRX OS=Mus musculus GN=...	[more]
ARIP4_XENTR	8.672e-7	32.73	Helicase ARIP4 OS=Xenopus tropicalis GN=rad54l2 PE...	[more]

BLAST of FG532840 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 10


Match Name	E-value	Identity	Description
AT2G16390.1	1.016e-43	74.77	\| Symbols: DRD1, CHR35, DMS1 \| SNF2 domain-contain...	[more]
AT2G21450.1	2.504e-42	74.77	\| Symbols: CHR34 \| chromatin remodeling 34 \| chr2:...	[more]
AT1G05490.1	4.440e-23	49.11	\| Symbols: chr31 \| chromatin remodeling 31 \| chr1:...	[more]
AT3G24340.1	1.478e-18	43.75	\| Symbols: chr40 \| chromatin remodeling 40 \| chr3:...	[more]
AT5G20420.1	1.340e-11	37.89	\| Symbols: CHR42 \| chromatin remodeling 42 \| chr5:...	[more]
AT3G42670.1	3.898e-11	36.84	\| Symbols: CHR38, CLSY \| chromatin remodeling 38 \|...	[more]
AT2G02090.1	8.129e-9	31.82	\| Symbols: CHR19, CHA19, ETL1 \| SNF2 domain-contai...	[more]
AT1G03750.1	8.129e-9	38.14	\| Symbols: CHR9 \| switch 2 \| chr1:937920-941068 FO...	[more]
AT2G18760.1	1.062e-8	36.36	\| Symbols: CHR8 \| chromatin remodeling 8 \| chr2:81...	[more]
AT1G08600.2	1.174e-7	32.74	\| Symbols: ATRX \| P-loop containing nucleoside tri...	[more]

InterPro

Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 47..110 score: 5.1
None	No IPR available	GENE3D	3.40.50.300	no description	coord: 10..106 score: 0.0
None	No IPR available	PANTHER	PTHR10799	ATP-DEPENDENT HELICASE SMARCA (SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN A)-RELATED	coord: 1..111 score: 3
None	No IPR available	PANTHER	PTHR10799:SF41	ATP-DEPENDENT HELICASE	coord: 1..111 score: 3
None	No IPR available	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 2..111 score: 9

Properties


Property Name	Value
Singlet in analysis	Pisum sativum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>FG532840 ID=FG532840; Name=FG532840; organism=Pisum sativum; type=EST; length=335bp
TGTCAAATCAAAATTCTTTCGCAATATGCTGAACCTATGTGAATCAACTG
GGGAGAAGCTTCTGGTGTTCAGTCAATATCTTTTGCCTTTGAAATATTTG
GAAAGGTTAGCTATAAAATGGAAGGAATGGAGTATTGGAAAAGAAATCTT
CGTGATATCAGGAGAGACACTACCTGAACAGAGGGAGTGTTCGATGGAAA
TGTTCAACAATTCATCAGATGCAAAAGTATTTTTTGGGTCAATCAAAGCA
TGTGGTGAGGGTATATCATTGGTTGGAGCATCCCGTGTCATCATATTGGA
TGTTCACCTAAATCCGTCTGTTACTCGTCAAGCTA

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding
GO:0004386	helicase activity
GO:0005524	ATP binding

Vocabulary: **INTERPRO**
Term	Definition
IPR001650	Helicase_C

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