FG530444

EST Overview
NameFG530444
Unique NameFG530444
TypeEST
OrganismPisum sativum (pea)
Sequence length527
Libraries
Library NameType
LIBEST_023217 MeriP Pisum sativum Shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Pisum sativum unigene v12010-12-29
Homology
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BLAST of FG530444 vs. TrEMBL
Match: D7SYL3_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_77.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00034996001 PE=4 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 4.467e-8
Identity = 37/101 (36.63%), Postives = 52/101 (51.49%), Query Frame = 1 
Query:   13 SVSRKGVSEDTAVADSGKNKISQ-NVSNSELQMSNIDSEKILVTLAKMEKRRERFKQPIXXXXXXXXXXXXXXXXXXXXXXTVDIGEIKQHRPVRKRRWNG 312
            SV  K  SE    + + K ++   N +N    ++  D+++IL TLAKMEKR+ERFK+PI                       V++ E  Q RP+RKRRWNG
Sbjct: 1205 SVETKDASESITPSRNVKRRLGNANAANGNKVVAECDNQRILQTLAKMEKRQERFKKPI------TLKKEPDKIPKPQVDPIVEMAETMQQRPLRKRRWNG 1299
[Close]
BLAST of FG530444 vs. TrEMBL
Match: A5BBK2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_011790 PE=4 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 4.467e-8
Identity = 37/101 (36.63%), Postives = 52/101 (51.49%), Query Frame = 1 
Query:   13 SVSRKGVSEDTAVADSGKNKISQ-NVSNSELQMSNIDSEKILVTLAKMEKRRERFKQPIXXXXXXXXXXXXXXXXXXXXXXTVDIGEIKQHRPVRKRRWNG 312
            SV  K  SE    + + K ++   N +N    ++  D+++IL TLAKMEKR+ERFK+PI                       V++ E  Q RP+RKRRWNG
Sbjct: 1243 SVETKDASESITPSRNVKRRLGNANAANGNKVVAECDNQRILQTLAKMEKRQERFKKPI------TLKKEPDKIPKPQVDPIVEMAETMQQRPLRKRRWNG 1337
The following BLAST results are available for this feature:
BLAST of FG530444 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 2
Match NameE-valueIdentityDescription
D7SYL3_VITVI4.467e-836.63Whole genome shotgun sequence of line PN40024, sca... [more]
A5BBK2_VITVI4.467e-836.63Putative uncharacterized protein OS=Vitis vinifera... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 62..83
score
NoneNo IPR availableSEGsegsegcoord: 36..51
score
NoneNo IPR availableSEGsegsegcoord: 25..43
score

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FG530444 ID=FG530444; Name=FG530444; organism=Pisum sativum; type=EST; length=527bp
TAGGCAGAGGTTTCTGTATCCAGAAAAGGTGTTTCTGAAGATACAGCAGT
TGCTGACAGTGGGAAGAACAAAATCTCACAAAATGTGAGCAATTCTGAAT
TGCAAATGAGTAATATTGACAGCGAGAAGATTCTTGTTACATTGGCTAAA
ATGGAGAAACGTAGGGAGCGCTTTAAGCAGCCCATCAGTTTGAAAAAAGA
AGCTGAAAAGAGTTTAGAAGCTGAAAAAAGTTTGAAGCTGAGCACCGAGT
CGACAGTTGATATAGGTGAAATAAAGCAACATAGACCAGTTCGAAAGAGG
CGCTGGAACGGTGGTTAGTTTTTATGTTGGAGGAATTGGTTTAATTGATG
TTTACATTATTGAATATCTGGAAAGGGTTCTCTTGTTGTTTAACTATATT
TCTGCAGTAATGGCTGAGAATTCAGCTTTATATTGTACCTGATTCTTAGA
CTCTGGTGGACATAAATTTCATTTGTAACTGGAAGATTACTCAGTGACTT
TGGTGTAGAAGTTTTTAAATTGTGTTG
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