FG534394

EST Overview
NameFG534394
Unique NameFG534394
TypeEST
OrganismPisum sativum (pea)
Sequence length528
Libraries
Library NameType
LIBEST_023215 MeriZ Pisum sativum Shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Homology
BLAST of FG534394 vs. TrEMBL
Match: A5BYF1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_013944 PE=4 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 2.968e-36
Identity = 75/95 (78.95%), Postives = 84/95 (88.42%), Query Frame = 3
Query:    3 SLYKEAFVSFSISSSIEPDYVPSIISTAELLIKLGMQSFPMARSFLMNALRLEPTNHDAWFNLGMVSKMEGSLQQAADCFQAAYELKFTTPVQKF 287
            SLYKEA VSFS+S SIEPDYVPSI+STAE+L+K G  S P+ARSFLMNALRLEPTNH+AW NLG+VSKMEGSLQQAAD FQAAYELK + P+Q F
Sbjct:  719 SLYKEALVSFSVSLSIEPDYVPSIVSTAEVLMKFGKPSLPIARSFLMNALRLEPTNHEAWLNLGLVSKMEGSLQQAADYFQAAYELKLSAPIQSF 813          
BLAST of FG534394 vs. TrEMBL
Match: B9GNP5_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_754908 PE=4 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 1.991e-32
Identity = 66/93 (70.97%), Postives = 84/93 (90.32%), Query Frame = 3
Query:    3 SLYKEAFVSFSISSSIEPDYVPSIISTAELLIKLGMQSFPMARSFLMNALRLEPTNHDAWFNLGMVSKMEGSLQQAADCFQAAYELKFTTPVQ 281
            SL+KEA VSFS+S S+EPDYVPSI++TAE+L+KLG QS P+ARSFLM+ALRL+PTNH+AW NLG++SKMEGSL+QAA+ FQAA+EL  + P+Q
Sbjct:  613 SLHKEALVSFSVSLSVEPDYVPSIVATAEVLMKLGTQSLPIARSFLMHALRLDPTNHEAWLNLGLISKMEGSLKQAAEFFQAAHELMLSAPIQ 705          
BLAST of FG534394 vs. TrEMBL
Match: B9IBR3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_572035 PE=4 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 2.601e-32
Identity = 65/95 (68.42%), Postives = 85/95 (89.47%), Query Frame = 3
Query:    3 SLYKEAFVSFSISSSIEPDYVPSIISTAELLIKLGMQSFPMARSFLMNALRLEPTNHDAWFNLGMVSKMEGSLQQAADCFQAAYELKFTTPVQKF 287
            SL+KEA VSFS++ S+EPDY+PSI++TAE+L+K G QSF +ARSFLM+ALRL+PTNH+AW NLG++SKMEGSL+QAA+ FQAA+ELK + P+Q F
Sbjct:  619 SLHKEALVSFSVALSVEPDYIPSIVATAEVLMKPGTQSFSIARSFLMHALRLDPTNHEAWLNLGLISKMEGSLKQAAEFFQAAHELKLSAPIQSF 713          
BLAST of FG534394 vs. TrEMBL
Match: B9R701_RICCO (Calmodulin binding protein, putative OS=Ricinus communis GN=RCOM_1587380 PE=4 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 3.396e-32
Identity = 68/93 (73.12%), Postives = 82/93 (88.17%), Query Frame = 3
Query:    3 SLYKEAFVSFSISSSIEPDYVPSIISTAELLIKLGMQSFPMARSFLMNALRLEPTNHDAWFNLGMVSKMEGSLQQAADCFQAAYELKFTTPVQ 281
            SL+KEA V+FS+S SIEPDYVPSI+STA++L+KLG Q FP+ARSFLMNALR+E  NH+AW NLG++SKMEGSLQQAAD FQAAYELK +  V+
Sbjct:  558 SLHKEALVAFSVSLSIEPDYVPSIVSTAKVLMKLGSQLFPIARSFLMNALRIESMNHEAWLNLGLISKMEGSLQQAADFFQAAYELKLSASVE 650          
BLAST of FG534394 vs. TrEMBL
Match: Q9CB03_ARATH (At1g27460/F17L21_26 OS=Arabidopsis thaliana GN=At1g27460 PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.132e-26
Identity = 58/95 (61.05%), Postives = 76/95 (80.00%), Query Frame = 3
Query:    3 SLYKEAFVSFSISSSIEPDYVPSIISTAELLIKLGMQSFPMARSFLMNALRLEPTNHDAWFNLGMVSKMEGSLQQAADCFQAAYELKFTTPVQKF 287
            SL++EA +SF +S SIEPD+VPSI+S AE+++K G +S P A+SFLMNALRL+P NHDAW  LG V+K +G  QQAA+ +QAAYEL+ + PVQ F
Sbjct:  599 SLHEEALISFFLSLSIEPDHVPSIVSIAEVMMKSGDESLPTAKSFLMNALRLDPRNHDAWMKLGHVAKKQGLSQQAAEFYQAAYELELSAPVQSF 693          
BLAST of FG534394 vs. TrEMBL
Match: D7KBQ5_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_890270 PE=4 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 8.103e-26
Identity = 57/95 (60.00%), Postives = 75/95 (78.95%), Query Frame = 3
Query:    3 SLYKEAFVSFSISSSIEPDYVPSIISTAELLIKLGMQSFPMARSFLMNALRLEPTNHDAWFNLGMVSKMEGSLQQAADCFQAAYELKFTTPVQKF 287
            SL++EA  SF +S SIEPD+VPSI+S AE+++K G +S P A+SFLMNAL+L+P NHDAW  LG V+K +G  QQAA+ +QAAYEL+ + PVQ F
Sbjct:  599 SLHEEALTSFFLSLSIEPDHVPSIVSIAEVMMKSGGESLPTAKSFLMNALKLDPRNHDAWMKLGHVAKKQGMSQQAAEFYQAAYELELSAPVQSF 693          
BLAST of FG534394 vs. TrEMBL
Match: C5WTU6_SORBI (Putative uncharacterized protein Sb01g043840 OS=Sorghum bicolor GN=Sb01g043840 PE=4 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.358e-25
Identity = 56/94 (59.57%), Postives = 74/94 (78.72%), Query Frame = 3
Query:    6 LYKEAFVSFSISSSIEPDYVPSIISTAELLIKLGMQSFPMARSFLMNALRLEPTNHDAWFNLGMVSKMEGSLQQAADCFQAAYELKFTTPVQKF 287
            L+KEA ++FS + SI+PDYVPS++  A +L  +G  S  +AR++L NALRLEPTNH AW +LG+V K EGSLQ+AADCFQAAYEL+  +P+Q F
Sbjct:  624 LHKEALMAFSFALSIDPDYVPSMVCMAGILRDIGGNSLSIARTYLRNALRLEPTNHRAWLSLGLVLKAEGSLQEAADCFQAAYELRELSPIQDF 717          
BLAST of FG534394 vs. TrEMBL
Match: Q10QD7_ORYSJ (TPR Domain containing protein, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os03g10350 PE=4 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 4.021e-25
Identity = 57/95 (60.00%), Postives = 74/95 (77.89%), Query Frame = 3
Query:    3 SLYKEAFVSFSISSSIEPDYVPSIISTAELLIKLGMQSFPMARSFLMNALRLEPTNHDAWFNLGMVSKMEGSLQQAADCFQAAYELKFTTPVQKF 287
            SL++EA  +FS+S SI+PDYVPS++  A +L  LG +S  +AR+FL NALRLEPT+H AW  LG+V K EGSL +AADCFQAAYEL+  +P+Q F
Sbjct:  604 SLHQEALTAFSLSLSIDPDYVPSMVCMAGILTILGGKSLSIARTFLRNALRLEPTSHQAWLRLGLVLKSEGSLLEAADCFQAAYELQELSPIQDF 698          
BLAST of FG534394 vs. TrEMBL
Match: B9F5R6_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_09805 PE=4 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 4.021e-25
Identity = 57/95 (60.00%), Postives = 74/95 (77.89%), Query Frame = 3
Query:    3 SLYKEAFVSFSISSSIEPDYVPSIISTAELLIKLGMQSFPMARSFLMNALRLEPTNHDAWFNLGMVSKMEGSLQQAADCFQAAYELKFTTPVQKF 287
            SL++EA  +FS+S SI+PDYVPS++  A +L  LG +S  +AR+FL NALRLEPT+H AW  LG+V K EGSL +AADCFQAAYEL+  +P+Q F
Sbjct:  621 SLHQEALTAFSLSLSIDPDYVPSMVCMAGILTILGGKSLSIARTFLRNALRLEPTSHQAWLRLGLVLKSEGSLLEAADCFQAAYELQELSPIQDF 715          
BLAST of FG534394 vs. TrEMBL
Match: B8AQ51_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_10410 PE=4 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 4.021e-25
Identity = 57/95 (60.00%), Postives = 74/95 (77.89%), Query Frame = 3
Query:    3 SLYKEAFVSFSISSSIEPDYVPSIISTAELLIKLGMQSFPMARSFLMNALRLEPTNHDAWFNLGMVSKMEGSLQQAADCFQAAYELKFTTPVQKF 287
            SL++EA  +FS+S SI+PDYVPS++  A +L  LG +S  +AR+FL NALRLEPT+H AW  LG+V K EGSL +AADCFQAAYEL+  +P+Q F
Sbjct:  519 SLHQEALTAFSLSLSIDPDYVPSMVCMAGILTILGGKSLSIARTFLRNALRLEPTSHQAWLRLGLVLKSEGSLLEAADCFQAAYELQELSPIQDF 613          
BLAST of FG534394 vs. SwissProt
Match: TTC7A_HUMAN (Tetratricopeptide repeat protein 7A OS=Homo sapiens GN=TTC7A PE=1 SV=3)

HSP 1 Score: 54.299 bits (129), Expect = 4.191e-7
Identity = 34/94 (36.17%), Postives = 52/94 (55.32%), Query Frame = 3
Query:    6 LYKEAFVSFSISSSIEPDYVPSIISTAELLIKLGMQSFPMARSFLMNALRLEPTNHDAWFNLGMVSKMEGSLQQAADCFQAAYELKFTTPVQKF 287
            LYKEA        ++ PD V  + S   +L +LG +S  +A+  L +A+  + T H+AW  LG V + +G  + A DCF  A EL+ ++PV  F
Sbjct:  767 LYKEAL-------TVNPDGVRIMHSLGLMLSRLGHKS--LAQKVLRDAVERQSTCHEAWQGLGEVLQAQGQNEAAVDCFLTALELEASSPVLPF 851          
BLAST of FG534394 vs. SwissProt
Match: TTC7A_MOUSE (Tetratricopeptide repeat protein 7A OS=Mus musculus GN=Ttc7a PE=1 SV=1)

HSP 1 Score: 53.1434 bits (126), Expect = 9.337e-7
Identity = 34/94 (36.17%), Postives = 52/94 (55.32%), Query Frame = 3
Query:    6 LYKEAFVSFSISSSIEPDYVPSIISTAELLIKLGMQSFPMARSFLMNALRLEPTNHDAWFNLGMVSKMEGSLQQAADCFQAAYELKFTTPVQKF 287
            LYKEA        ++ PD V  + S   +L +LG +S  +A+  L +A+  + T H+AW  LG V + +G  + A DCF  A EL+ ++PV  F
Sbjct:  767 LYKEAL-------TVNPDGVRIMHSLGLMLSQLGHKS--LAQKVLRDAVERQSTFHEAWQGLGEVLQDQGQNEAAVDCFLTALELEASSPVLPF 851          
BLAST of FG534394 vs. TAIR peptide
Match: AT1G27460.1 (| Symbols: NPGR1 | no pollen germination related 1 | chr1:9534977-9537424 FORWARD LENGTH=694)

HSP 1 Score: 122.094 bits (305), Expect = 1.769e-28
Identity = 58/95 (61.05%), Postives = 76/95 (80.00%), Query Frame = 3
Query:    3 SLYKEAFVSFSISSSIEPDYVPSIISTAELLIKLGMQSFPMARSFLMNALRLEPTNHDAWFNLGMVSKMEGSLQQAADCFQAAYELKFTTPVQKF 287
            SL++EA +SF +S SIEPD+VPSI+S AE+++K G +S P A+SFLMNALRL+P NHDAW  LG V+K +G  QQAA+ +QAAYEL+ + PVQ F
Sbjct:  599 SLHEEALISFFLSLSIEPDHVPSIVSIAEVMMKSGDESLPTAKSFLMNALRLDPRNHDAWMKLGHVAKKQGLSQQAAEFYQAAYELELSAPVQSF 693          
BLAST of FG534394 vs. TAIR peptide
Match: AT4G28600.1 (| Symbols: NPGR2 | no pollen germination related 2 | chr4:14130046-14132599 FORWARD LENGTH=739)

HSP 1 Score: 87.4261 bits (215), Expect = 4.829e-18
Identity = 45/96 (46.88%), Postives = 67/96 (69.79%), Query Frame = 3
Query:   12 KEAFVSFSISSSIEPDYVPSIISTAELLIKLGMQS-FPMARSFLMNALRLEPTNHDAWFNLGMVSKMEG---SLQQAADCFQAAYELKFTTPVQKF 287
            +EA  +F+ +  I+P +VPS+ S AE+L+++G +S   + RSFLM ALR++  NH AW+NLG + K EG   S+Q+A +CFQAA  L+ T PV+ F
Sbjct:  643 EEAMEAFTTALDIDPMHVPSLTSKAEILLEVGNRSGIAVVRSFLMEALRIDRLNHSAWYNLGKMFKAEGSVSSMQEAVECFQAAVTLEETMPVEPF 738          
BLAST of FG534394 vs. TAIR peptide
Match: AT2G43040.1 (| Symbols: NPG1 | tetratricopeptide repeat (TPR)-containing protein | chr2:17896049-17898524 REVERSE LENGTH=704)

HSP 1 Score: 72.0182 bits (175), Expect = 2.100e-13
Identity = 37/96 (38.54%), Postives = 56/96 (58.33%), Query Frame = 3
Query:    9 YKEAFVSFSISSSIEPDYVPSIISTAELLIKLGMQ---SFPMARSFLMNALRLEPTNHDAWFNLGMVSKMEGSLQQAADCFQAAYELKFTTPVQKF 287
            +K A  +F     ++   VP  ++   LL + G     + P+ARS L +ALR++PTN  AW+ LGMV K +G +  A DCFQAA  L+ + P++ F
Sbjct:  605 FKPALAAFLDGLLLDGSSVPCKVAVGALLSERGKDHQPTLPVARSLLSDALRIDPTNRKAWYYLGMVHKSDGRIADATDCFQAASMLEESDPIESF 700          
The following BLAST results are available for this feature:
BLAST of FG534394 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
A5BYF1_VITVI2.968e-3678.95Putative uncharacterized protein OS=Vitis vinifera... [more]
B9GNP5_POPTR1.991e-3270.97Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9IBR3_POPTR2.601e-3268.42Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9R701_RICCO3.396e-3273.12Calmodulin binding protein, putative OS=Ricinus co... [more]
Q9CB03_ARATH2.132e-2661.05At1g27460/F17L21_26 OS=Arabidopsis thaliana GN=At1... [more]
D7KBQ5_ARALY8.103e-2660.00Putative uncharacterized protein OS=Arabidopsis ly... [more]
C5WTU6_SORBI2.358e-2559.57Putative uncharacterized protein Sb01g043840 OS=So... [more]
Q10QD7_ORYSJ4.021e-2560.00TPR Domain containing protein, expressed OS=Oryza ... [more]
B9F5R6_ORYSJ4.021e-2560.00Putative uncharacterized protein OS=Oryza sativa s... [more]
B8AQ51_ORYSI4.021e-2560.00Putative uncharacterized protein OS=Oryza sativa s... [more]
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BLAST of FG534394 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 2
Match NameE-valueIdentityDescription
TTC7A_HUMAN4.191e-736.17Tetratricopeptide repeat protein 7A OS=Homo sapien... [more]
TTC7A_MOUSE9.337e-736.17Tetratricopeptide repeat protein 7A OS=Mus musculu... [more]
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BLAST of FG534394 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 3
Match NameE-valueIdentityDescription
AT1G27460.11.769e-2861.05| Symbols: NPGR1 | no pollen germination related 1... [more]
AT4G28600.14.829e-1846.88| Symbols: NPGR2 | no pollen germination related 2... [more]
AT2G43040.12.100e-1338.54| Symbols: NPG1 | tetratricopeptide repeat (TPR)-c... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helicalGENE3D1.25.40.10no descriptioncoord: 3..86
score: 2.6
IPR013026Tetratricopeptide repeat-containingPROFILEPS50293TPR_REGIONcoord: 1..90
score: 15
IPR019734Tetratricopeptide repeatPROFILEPS50005TPRcoord: 57..90
score: 8
NoneNo IPR availablePANTHERPTHR23083TETRATRICOPEPTIDE REPEAT PROTEIN, TPRcoord: 16..87
score: 1.1
NoneNo IPR availablePANTHERPTHR23083:SF23O-GLCNAC TRANSFERASE, P110 SUBUNIT-RELATEDcoord: 16..87
score: 1.1
NoneNo IPR availableSUPERFAMILY48452TPR-likecoord: 3..85
score: 1.3
NoneNo IPR availableSEGsegsegcoord: 35..48
score

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FG534394 ID=FG534394; Name=FG534394; organism=Pisum sativum; type=EST; length=528bp
AGTCATTATACAAGGAAGCCTTTGTTTCGTTCTCAATCTCATCGTCAATA
GAACCTGATTATGTTCCAAGTATCATTTCAACTGCAGAGTTGTTGATTAA
ACTTGGTATGCAATCATTTCCAATGGCAAGAAGCTTTTTAATGAATGCTT
TGCGATTGGAACCTACAAACCACGACGCGTGGTTCAATCTTGGAATGGTT
TCGAAAATGGAAGGTTCATTACAACAAGCAGCAGATTGCTTTCAAGCTGC
TTATGAGCTGAAGTTTACAACTCCAGTGCAAAAGTTTGAGTGATTGAGTT
GAGACTTTGGAGAGCTTAAACTCTTTGTGGTTGAGGGAAAGTGAGCTTCA
ACAAGATCATAATAGAAAAGACATAAGCAGCTGGTAATAGGAAAAAAGAA
AAATTGTTCCATGGTTACCCATTCATGGTTAACTAAATGTTAAAATAATG
TATAGCTCAATCTAGCTGCTTATCTATAGATGTACTTCAACCTGTTTTCA
ATGAAATATCAGTTAAAATTGACAGAGT
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom
IPR019734TPR_repeat