FG536231

EST Overview


Name	FG536231
Unique Name	FG536231
Type	EST
Organism	Pisum sativum (pea)
Sequence length	277

Libraries


Library Name	Type
LIBEST_023215 MeriZ Pisum sativum Shoot apical meristem ESTs	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Pisum sativum unigene v1	Pisum sativum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Pisum sativum unigene v1	2010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Pisum sativum unigene v1	2010-12-29

Homology

[Close]

BLAST of FG536231 vs. TrEMBL
Match: B9RIW9_RICCO (Calmodulin-binding heat-shock protein, putative OS=Ricinus communis GN=RCOM_1583280 PE=4 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 8.602e-8
Identity = 32/60 (53.33%), Postives = 41/60 (68.33%), Query Frame = 1

Query:    1 PSQYGTFDDEGE----ESSRKSEAEFSVSSTNKS-ADESWDVLIERLFDTDEHGKMVFKR 165
            PSQYGTFD++ E    + S+KS  E S  S+ KS + E+WD LIERLF+ DE G MV K+
Sbjct:  392 PSQYGTFDEQDEGLKGDESQKSSGESSFGSSRKSKSKENWDELIERLFEKDESGHMVLKK 451

The following BLAST results are available for this feature:

BLAST of FG536231 vs. TrEMBL

BLAST of FG536231 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 1


Match Name	E-value	Identity	Description
B9RIW9_RICCO	8.602e-8	53.33	Calmodulin-binding heat-shock protein, putative OS...	[more]

InterPro

Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 55..68 score

Properties


Property Name	Value
Singlet in analysis	Pisum sativum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>FG536231 ID=FG536231; Name=FG536231; organism=Pisum sativum; type=EST; length=277bp
CCATCACAATACGGAACTTTTGATGATGAGGGTGAGGAGAGTTCGAGAAA
GTCAGAGGCCGAGTTTTCTGTTAGTTCAACCAATAAGAGCGCTGATGAAA
GCTGGGATGTATTGATTGAGCGTCTTTTTGATACGGATGAGCATGGCAAG
ATGGTGTTCAAGAGATGAATGATGATCATGTAGTTTGTATGTATGATACA
TGAATTATTGTCTTGAACTAAAATTCATTCATTCTTTTGTGATTTTTGGT
AAATACATAAAGTGATGATTGGTTAAN

Search form