FG538376

EST Overview


Name	FG538376
Unique Name	FG538376
Type	EST
Organism	Pisum sativum (pea)
Sequence length	406

Libraries


Library Name	Type
LIBEST_023215 MeriZ Pisum sativum Shoot apical meristem ESTs	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Pisum sativum unigene v1	Pisum sativum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Pisum sativum unigene v1	2010-12-27
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Pisum sativum unigene v1 vs Trembl	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs Swissprot	2010-12-28
InterProScan analysis for Pisum sativum unigene v1	2010-12-29

Homology

[Close]

BLAST of FG538376 vs. TrEMBL
Match: A9P9G6_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_749327 PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 7.174e-47
Identity = 88/92 (95.65%), Postives = 89/92 (96.74%), Query Frame = 3

Query:    3 NKECKKHTLHKVTQYKKGKDSIAAQGKRRYDRKQSGYGAQTKPVFHKKVKTTKKIVLRLQCQGCKHVSQHAIKRCKHFEIGGDKKGKGTSLF 278
            NKECKKHTLHKVTQYKKGKDS+AAQGKRRYDRKQSGYG QTKPVFHKK KTTKKIVLRLQCQ CKHVSQHAIKRCKHFEIGGDKKGKGTSLF
Sbjct:   14 NKECKKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQACKHVSQHAIKRCKHFEIGGDKKGKGTSLF 105

[Close]

BLAST of FG538376 vs. TrEMBL
Match: B7FGY8_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=3 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 9.370e-47
Identity = 88/92 (95.65%), Postives = 90/92 (97.83%), Query Frame = 3

Query:    3 NKECKKHTLHKVTQYKKGKDSIAAQGKRRYDRKQSGYGAQTKPVFHKKVKTTKKIVLRLQCQGCKHVSQHAIKRCKHFEIGGDKKGKGTSLF 278
            +KECKKHTLH+VTQYKKGKDSIAAQGKRRYDRKQSGYG QTKPVFHKK KTTKKIVLRLQCQGCKHVSQHAIKRCKHFEIGGDKKGKGTSLF
Sbjct:   14 SKECKKHTLHEVTQYKKGKDSIAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHAIKRCKHFEIGGDKKGKGTSLF 105

[Close]

BLAST of FG538376 vs. TrEMBL
Match: C6SVA6_SOYBN (Putative uncharacterized protein OS=Glycine max PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 1.598e-46
Identity = 87/92 (94.57%), Postives = 90/92 (97.83%), Query Frame = 3

Query:    3 NKECKKHTLHKVTQYKKGKDSIAAQGKRRYDRKQSGYGAQTKPVFHKKVKTTKKIVLRLQCQGCKHVSQHAIKRCKHFEIGGDKKGKGTSLF 278
            ++EC+KHTLHKVTQYKKGKDSIAAQGKRRYDRKQSGYG QTKPVFHKK KTTKKIVLRLQCQGCKHVSQHAIKRCKHFEIGGDKKGKGTSLF
Sbjct:   14 SRECRKHTLHKVTQYKKGKDSIAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHAIKRCKHFEIGGDKKGKGTSLF 105

[Close]

BLAST of FG538376 vs. TrEMBL
Match: Q00508_CANMA (Ribosomal protein L41 OS=Candida maltosa PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 2.087e-46
Identity = 87/92 (94.57%), Postives = 89/92 (96.74%), Query Frame = 3

Query:    3 NKECKKHTLHKVTQYKKGKDSIAAQGKRRYDRKQSGYGAQTKPVFHKKVKTTKKIVLRLQCQGCKHVSQHAIKRCKHFEIGGDKKGKGTSLF 278
            +KECKKHTLHKVTQYKKGKDS+AAQGKRRYDRKQSGYG QTKPVFHKK KTTKKIVLRLQCQGCKHVSQH IKRCKHFEIGGDKKGKGTSLF
Sbjct:   14 SKECKKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSLF 105

[Close]

BLAST of FG538376 vs. TrEMBL
Match: A9PD13_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_819897 PE=3 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 2.726e-46
Identity = 87/92 (94.57%), Postives = 88/92 (95.65%), Query Frame = 3

Query:    3 NKECKKHTLHKVTQYKKGKDSIAAQGKRRYDRKQSGYGAQTKPVFHKKVKTTKKIVLRLQCQGCKHVSQHAIKRCKHFEIGGDKKGKGTSLF 278
            NKECKKHTLHKVTQYKKGKDS+AAQGKRRYDRKQSGYG QTKPVFHKK KTTKKIVLRLQCQ CKHVSQH IKRCKHFEIGGDKKGKGTSLF
Sbjct:   14 NKECKKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQSCKHVSQHPIKRCKHFEIGGDKKGKGTSLF 105

[Close]

BLAST of FG538376 vs. TrEMBL
Match: D7T9H6_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_11.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00012054001 PE=4 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 4.650e-46
Identity = 86/92 (93.48%), Postives = 89/92 (96.74%), Query Frame = 3

Query:    3 NKECKKHTLHKVTQYKKGKDSIAAQGKRRYDRKQSGYGAQTKPVFHKKVKTTKKIVLRLQCQGCKHVSQHAIKRCKHFEIGGDKKGKGTSLF 278
            +KEC+KHTLHKVTQYKKGKDS+AAQGKRRYDRKQSGYG QTKPVFHKK KTTKKIVLRLQCQGCKHVSQH IKRCKHFEIGGDKKGKGTSLF
Sbjct:  223 SKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSLF 314

[Close]

BLAST of FG538376 vs. TrEMBL
Match: D7T9H4_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_11.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00012052001 PE=4 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 4.650e-46
Identity = 86/92 (93.48%), Postives = 89/92 (96.74%), Query Frame = 3

Query:    3 NKECKKHTLHKVTQYKKGKDSIAAQGKRRYDRKQSGYGAQTKPVFHKKVKTTKKIVLRLQCQGCKHVSQHAIKRCKHFEIGGDKKGKGTSLF 278
            +KEC+KHTLHKVTQYKKGKDS+AAQGKRRYDRKQSGYG QTKPVFHKK KTTKKIVLRLQCQGCKHVSQH IKRCKHFEIGGDKKGKGTSLF
Sbjct:   18 SKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSLF 109

[Close]

BLAST of FG538376 vs. TrEMBL
Match: D7T309_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_64.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00032097001 PE=4 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 4.650e-46
Identity = 86/92 (93.48%), Postives = 89/92 (96.74%), Query Frame = 3

Query:    3 NKECKKHTLHKVTQYKKGKDSIAAQGKRRYDRKQSGYGAQTKPVFHKKVKTTKKIVLRLQCQGCKHVSQHAIKRCKHFEIGGDKKGKGTSLF 278
            +KEC+KHTLHKVTQYKKGKDS+AAQGKRRYDRKQSGYG QTKPVFHKK KTTKKIVLRLQCQGCKHVSQH IKRCKHFEIGGDKKGKGTSLF
Sbjct:   49 SKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSLF 140

[Close]

BLAST of FG538376 vs. TrEMBL
Match: B9RPH5_RICCO (60S ribosomal protein L44 (Fragment) OS=Ricinus communis GN=RCOM_1740440 PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 4.650e-46
Identity = 86/92 (93.48%), Postives = 89/92 (96.74%), Query Frame = 3

Query:    3 NKECKKHTLHKVTQYKKGKDSIAAQGKRRYDRKQSGYGAQTKPVFHKKVKTTKKIVLRLQCQGCKHVSQHAIKRCKHFEIGGDKKGKGTSLF 278
            +KEC+KHTLHKVTQYKKGKDS+AAQGKRRYDRKQSGYG QTKPVFHKK KTTKKIVLRLQCQGCKHVSQH IKRCKHFEIGGDKKGKGTSLF
Sbjct:   13 SKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSLF 104

[Close]

BLAST of FG538376 vs. TrEMBL
Match: B9RH89_RICCO (60S ribosomal protein L44 OS=Ricinus communis GN=RCOM_1448760 PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 4.650e-46
Identity = 86/92 (93.48%), Postives = 89/92 (96.74%), Query Frame = 3

Query:    3 NKECKKHTLHKVTQYKKGKDSIAAQGKRRYDRKQSGYGAQTKPVFHKKVKTTKKIVLRLQCQGCKHVSQHAIKRCKHFEIGGDKKGKGTSLF 278
            +KEC+KHTLHKVTQYKKGKDS+AAQGKRRYDRKQSGYG QTKPVFHKK KTTKKIVLRLQCQGCKHVSQH IKRCKHFEIGGDKKGKGTSLF
Sbjct:   14 SKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSLF 105

[Close]

BLAST of FG538376 vs. SwissProt
Match: RL44_GOSHI (60S ribosomal protein L44 OS=Gossypium hirsutum GN=RPL44 PE=3 SV=3)

HSP 1 Score: 187.193 bits (474), Expect = 2.287e-47
Identity = 86/92 (93.48%), Postives = 89/92 (96.74%), Query Frame = 3

Query:    3 NKECKKHTLHKVTQYKKGKDSIAAQGKRRYDRKQSGYGAQTKPVFHKKVKTTKKIVLRLQCQGCKHVSQHAIKRCKHFEIGGDKKGKGTSLF 278
            +KEC+KHTLHKVTQYKKGKDS+AAQGKRRYDRKQSGYG QTKPVFHKK KTTKKIVLRLQCQGCKHVSQH IKRCKHFEIGGDKKGKGTSLF
Sbjct:   14 SKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSLF 105

[Close]

BLAST of FG538376 vs. SwissProt
Match: RL36A_ARATH (60S ribosomal protein L36a OS=Arabidopsis thaliana GN=RPL36AA PE=2 SV=3)

HSP 1 Score: 182.956 bits (463), Expect = 4.313e-46
Identity = 85/92 (92.39%), Postives = 86/92 (93.48%), Query Frame = 3

Query:    3 NKECKKHTLHKVTQYKKGKDSIAAQGKRRYDRKQSGYGAQTKPVFHKKVKTTKKIVLRLQCQGCKHVSQHAIKRCKHFEIGGDKKGKGTSLF 278
            NKECKKHTLHKVTQYKKGKDS+AAQGKRRYDRKQSGYG QTKPVFHKK KTTKKIVLRLQCQ CKH SQ  IKRCKHFEIGGDKKGKGTSLF
Sbjct:   14 NKECKKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQSCKHFSQRPIKRCKHFEIGGDKKGKGTSLF 105

[Close]

BLAST of FG538376 vs. SwissProt
Match: RL44_PHARH (60S ribosomal protein L44 OS=Phaffia rhodozyma GN=RPL44 PE=3 SV=3)

HSP 1 Score: 153.68 bits (387), Expect = 2.802e-37
Identity = 70/90 (77.78%), Postives = 77/90 (85.56%), Query Frame = 3

Query:    6 KECKKHTLHKVTQYKKGKDSIAAQGKRRYDRKQSGYGAQTKPVFHKKVKTTKKIVLRLQCQGCKHVSQHAIKRCKHFEIGGDKKGKGTSL 275
            K CKKHT HKVTQYKKGKDSI AQGKRRYDRKQSGYG QTKPVFHKK KTTKK+VLRL+C  CK+  Q  +KRCKHFE+GGDKK KG ++
Sbjct:   15 KACKKHTPHKVTQYKKGKDSIFAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKVVLRLECSVCKYKMQMTLKRCKHFELGGDKKTKGAAI 104

[Close]

BLAST of FG538376 vs. SwissProt
Match: RL44_COPCI (60S ribosomal protein L44 OS=Coprinopsis cinerea GN=RPL44 PE=3 SV=3)

HSP 1 Score: 152.525 bits (384), Expect = 6.243e-37
Identity = 70/90 (77.78%), Postives = 78/90 (86.67%), Query Frame = 3

Query:    6 KECKKHTLHKVTQYKKGKDSIAAQGKRRYDRKQSGYGAQTKPVFHKKVKTTKKIVLRLQCQGCKHVSQHAIKRCKHFEIGGDKKGKGTSL 275
            K CKKHT HKVTQYKKGKDSI AQGKRRYDRKQSGYG QTKPVFHKK KTTKK+VLRL+C  CK+  Q ++KRCKHFE+GG+KK KG +L
Sbjct:   15 KTCKKHTPHKVTQYKKGKDSIFAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKVVLRLECTVCKYKMQVSLKRCKHFELGGEKKTKGAAL 104

[Close]

BLAST of FG538376 vs. SwissProt
Match: RL44_COPC7 (60S ribosomal protein L44 OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=RPL44 PE=3 SV=2)

HSP 1 Score: 152.525 bits (384), Expect = 6.243e-37
Identity = 70/90 (77.78%), Postives = 78/90 (86.67%), Query Frame = 3

Query:    6 KECKKHTLHKVTQYKKGKDSIAAQGKRRYDRKQSGYGAQTKPVFHKKVKTTKKIVLRLQCQGCKHVSQHAIKRCKHFEIGGDKKGKGTSL 275
            K CKKHT HKVTQYKKGKDSI AQGKRRYDRKQSGYG QTKPVFHKK KTTKK+VLRL+C  CK+  Q ++KRCKHFE+GG+KK KG +L
Sbjct:   15 KTCKKHTPHKVTQYKKGKDSIFAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKVVLRLECTVCKYKMQVSLKRCKHFELGGEKKTKGAAL 104

[Close]

BLAST of FG538376 vs. SwissProt
Match: RL44_CRYNE (60S ribosomal protein L44 OS=Cryptococcus neoformans GN=RPL44 PE=3 SV=3)

HSP 1 Score: 150.984 bits (380), Expect = 1.816e-36
Identity = 68/90 (75.56%), Postives = 78/90 (86.67%), Query Frame = 3

Query:    6 KECKKHTLHKVTQYKKGKDSIAAQGKRRYDRKQSGYGAQTKPVFHKKVKTTKKIVLRLQCQGCKHVSQHAIKRCKHFEIGGDKKGKGTSL 275
            K C+KHT HKVTQYKKGKDS++AQGKRRYDRKQSGYG QTKPVFHKK KTTKK+VLRL+C  CK   Q A+KRCKHFE+GGDKK +G ++
Sbjct:   15 KACRKHTPHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKVVLRLECTVCKTKHQLALKRCKHFELGGDKKQRGAAI 104

[Close]

BLAST of FG538376 vs. SwissProt
Match: RL44_PICJA (60S ribosomal protein L44 OS=Pichia jadinii GN=RPL44 PE=3 SV=2)

HSP 1 Score: 149.058 bits (375), Expect = 6.902e-36
Identity = 69/90 (76.67%), Postives = 77/90 (85.56%), Query Frame = 3

Query:    6 KECKKHTLHKVTQYKKGKDSIAAQGKRRYDRKQSGYGAQTKPVFHKKVKTTKKIVLRLQCQGCKHVSQHAIKRCKHFEIGGDKKGKGTSL 275
            KEC+KHT HKVTQYK GK S+ AQGKRRYDRKQSGYG QTKPVFHKK KTTKK+VLRL+C  CK  +Q A+KRCKHFE+GGDKK KG +L
Sbjct:   15 KECRKHTQHKVTQYKAGKASLFAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKVVLRLECVVCKTKAQLALKRCKHFELGGDKKQKGQAL 104

[Close]

BLAST of FG538376 vs. SwissProt
Match: RL44_CANGY (60S ribosomal protein L44 OS=Candida glycerinogenes GN=RPL44 PE=3 SV=3)

HSP 1 Score: 147.132 bits (370), Expect = 2.623e-35
Identity = 67/90 (74.44%), Postives = 76/90 (84.44%), Query Frame = 3

Query:    6 KECKKHTLHKVTQYKKGKDSIAAQGKRRYDRKQSGYGAQTKPVFHKKVKTTKKIVLRLQCQGCKHVSQHAIKRCKHFEIGGDKKGKGTSL 275
            K+CKKHT HKVTQYK GK S+ +QGKRRYDRKQSGYG QTKPVFHKK KTTKK+VLRL+C  CK   Q ++KRCKHFE+GGDKK KG +L
Sbjct:   15 KQCKKHTQHKVTQYKAGKASLYSQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKVVLRLECVACKTKLQLSLKRCKHFELGGDKKQKGAAL 104

[Close]

BLAST of FG538376 vs. SwissProt
Match: RL44_PICCI (60S ribosomal protein L44 OS=Pichia ciferrii GN=RPL44 PE=3 SV=3)

HSP 1 Score: 146.747 bits (369), Expect = 3.425e-35
Identity = 67/90 (74.44%), Postives = 77/90 (85.56%), Query Frame = 3

Query:    6 KECKKHTLHKVTQYKKGKDSIAAQGKRRYDRKQSGYGAQTKPVFHKKVKTTKKIVLRLQCQGCKHVSQHAIKRCKHFEIGGDKKGKGTSL 275
            KEC+KHT HKVTQYK GK S+ AQGKRRYDRKQSGYG QTKPVFHKK KTTKK+VLRL+C  CK  +Q ++KRCKHFE+GGD+K KG +L
Sbjct:   15 KECRKHTQHKVTQYKAGKASLFAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKVVLRLECVVCKTKAQLSLKRCKHFELGGDRKQKGQAL 104

[Close]

BLAST of FG538376 vs. SwissProt
Match: RL44_DEBHA (60S ribosomal protein L44 OS=Debaryomyces hansenii GN=RPL44 PE=3 SV=3)

HSP 1 Score: 146.362 bits (368), Expect = 4.474e-35
Identity = 67/90 (74.44%), Postives = 76/90 (84.44%), Query Frame = 3

Query:    6 KECKKHTLHKVTQYKKGKDSIAAQGKRRYDRKQSGYGAQTKPVFHKKVKTTKKIVLRLQCQGCKHVSQHAIKRCKHFEIGGDKKGKGTSL 275
            KEC+KHT HKVTQYK GK S+ AQGKRRYDRKQ GYG QTKPVFHKK KTTKK+VLRL+C  CK  +Q ++KRCKHFE+GGDKK KG +L
Sbjct:   15 KECRKHTQHKVTQYKAGKASLFAQGKRRYDRKQKGYGGQTKPVFHKKAKTTKKVVLRLECVVCKTKAQLSLKRCKHFELGGDKKQKGQAL 104

[Close]

BLAST of FG538376 vs. TAIR peptide
Match: AT4G14320.1 (| Symbols: | Zinc-binding ribosomal protein family protein | chr4:8242684-8243805 REVERSE LENGTH=105)

HSP 1 Score: 182.956 bits (463), Expect = 4.766e-47
Identity = 85/92 (92.39%), Postives = 86/92 (93.48%), Query Frame = 3

Query:    3 NKECKKHTLHKVTQYKKGKDSIAAQGKRRYDRKQSGYGAQTKPVFHKKVKTTKKIVLRLQCQGCKHVSQHAIKRCKHFEIGGDKKGKGTSLF 278
            NKECKKHTLHKVTQYKKGKDS+AAQGKRRYDRKQSGYG QTKPVFHKK KTTKKIVLRLQCQ CKH SQ  IKRCKHFEIGGDKKGKGTSLF
Sbjct:   14 NKECKKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQSCKHFSQRPIKRCKHFEIGGDKKGKGTSLF 105

[Close]

BLAST of FG538376 vs. TAIR peptide
Match: AT3G23390.1 (| Symbols: | Zinc-binding ribosomal protein family protein | chr3:8375427-8376224 FORWARD LENGTH=105)

HSP 1 Score: 182.956 bits (463), Expect = 4.766e-47
Identity = 85/92 (92.39%), Postives = 86/92 (93.48%), Query Frame = 3

Query:    3 NKECKKHTLHKVTQYKKGKDSIAAQGKRRYDRKQSGYGAQTKPVFHKKVKTTKKIVLRLQCQGCKHVSQHAIKRCKHFEIGGDKKGKGTSLF 278
            NKECKKHTLHKVTQYKKGKDS+AAQGKRRYDRKQSGYG QTKPVFHKK KTTKKIVLRLQCQ CKH SQ  IKRCKHFEIGGDKKGKGTSLF
Sbjct:   14 NKECKKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQSCKHFSQRPIKRCKHFEIGGDKKGKGTSLF 105

[Close]

BLAST of FG538376 vs. TAIR peptide
Match: AT4G14320.2 (| Symbols: | Zinc-binding ribosomal protein family protein | chr4:8241841-8243805 REVERSE LENGTH=154)

HSP 1 Score: 158.303 bits (399), Expect = 1.257e-39
Identity = 73/80 (91.25%), Postives = 74/80 (92.50%), Query Frame = 3

Query:    3 NKECKKHTLHKVTQYKKGKDSIAAQGKRRYDRKQSGYGAQTKPVFHKKVKTTKKIVLRLQCQGCKHVSQHAIKRCKHFEI 242
            NKECKKHTLHKVTQYKKGKDS+AAQGKRRYDRKQSGYG QTKPVFHKK KTTKKIVLRLQCQ CKH SQ  IKRCKHFEI
Sbjct:   14 NKECKKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQSCKHFSQRPIKRCKHFEI 93

The following BLAST results are available for this feature:

BLAST of FG538376 vs. TrEMBL
BLAST of FG538376 vs. SwissProt
BLAST of FG538376 vs. TAIR peptide

BLAST of FG538376 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
A9P9G6_POPTR	7.174e-47	95.65	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B7FGY8_MEDTR	9.370e-47	95.65	Putative uncharacterized protein OS=Medicago trunc...	[more]
C6SVA6_SOYBN	1.598e-46	94.57	Putative uncharacterized protein OS=Glycine max PE...	[more]
Q00508_CANMA	2.087e-46	94.57	Ribosomal protein L41 OS=Candida maltosa PE=3 SV=1	[more]
A9PD13_POPTR	2.726e-46	94.57	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
D7T9H6_VITVI	4.650e-46	93.48	Whole genome shotgun sequence of line PN40024, sca...	[more]
D7T9H4_VITVI	4.650e-46	93.48	Whole genome shotgun sequence of line PN40024, sca...	[more]
D7T309_VITVI	4.650e-46	93.48	Whole genome shotgun sequence of line PN40024, sca...	[more]
B9RPH5_RICCO	4.650e-46	93.48	60S ribosomal protein L44 (Fragment) OS=Ricinus co...	[more]
B9RH89_RICCO	4.650e-46	93.48	60S ribosomal protein L44 OS=Ricinus communis GN=R...	[more]

BLAST of FG538376 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
RL44_GOSHI	2.287e-47	93.48	60S ribosomal protein L44 OS=Gossypium hirsutum GN...	[more]
RL36A_ARATH	4.313e-46	92.39	60S ribosomal protein L36a OS=Arabidopsis thaliana...	[more]
RL44_PHARH	2.802e-37	77.78	60S ribosomal protein L44 OS=Phaffia rhodozyma GN=...	[more]
RL44_COPCI	6.243e-37	77.78	60S ribosomal protein L44 OS=Coprinopsis cinerea G...	[more]
RL44_COPC7	6.243e-37	77.78	60S ribosomal protein L44 OS=Coprinopsis cinerea (...	[more]
RL44_CRYNE	1.816e-36	75.56	60S ribosomal protein L44 OS=Cryptococcus neoforma...	[more]
RL44_PICJA	6.902e-36	76.67	60S ribosomal protein L44 OS=Pichia jadinii GN=RPL...	[more]
RL44_CANGY	2.623e-35	74.44	60S ribosomal protein L44 OS=Candida glycerinogene...	[more]
RL44_PICCI	3.425e-35	74.44	60S ribosomal protein L44 OS=Pichia ciferrii GN=RP...	[more]
RL44_DEBHA	4.474e-35	74.44	60S ribosomal protein L44 OS=Debaryomyces hansenii...	[more]

BLAST of FG538376 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 3


Match Name	E-value	Identity	Description
AT4G14320.1	4.766e-47	92.39	\| Symbols: \| Zinc-binding ribosomal protein famil...	[more]
AT3G23390.1	4.766e-47	92.39	\| Symbols: \| Zinc-binding ribosomal protein famil...	[more]
AT4G14320.2	1.257e-39	91.25	\| Symbols: \| Zinc-binding ribosomal protein famil...	[more]

InterPro

Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000552	Ribosomal protein L44e	GENE3D	3.10.450.80	no description	coord: 2..81 score: 8.5
IPR000552	Ribosomal protein L44e	PANTHER	PTHR10369	60S RIBOSOMAL PROTEIN L44	coord: 2..92 score: 2.8
IPR000552	Ribosomal protein L44e	PFAM	PF00935	Ribosomal_L44	coord: 6..81 score: 1.7
IPR000552	Ribosomal protein L44e	PROSITE	PS01172	RIBOSOMAL_L44E	coord: 50..61 score
IPR011332	Ribosomal protein, zinc-binding domain	SUPERFAMILY	57829	Zn-binding ribosomal proteins	coord: 2..82 score: 3
None	No IPR available	SEG	seg	seg	coord: 4..21 score

Properties


Property Name	Value
Singlet in analysis	Pisum sativum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>FG538376 ID=FG538376; Name=FG538376; organism=Pisum sativum; type=EST; length=406bp
AAAACAAGGAGTGCAAGAAGCACACCTTACACAAAGTTACCCAATACAAA
AAGGGTAAAGACAGCATTGCCGCTCAAGGAAAGCGTCGTTATGATCGCAA
ACAATCTGGTTATGGTGCACAGACCAAGCCCGTCTTTCACAAAAAGGTTA
AAACAACTAAGAAAATTGTCTTGAGGCTTCAGTGTCAAGGCTGCAAACAT
GTTTCCCAACACGCCATTAAGAGGTGCAAGCATTTTGAAATTGGTGGTGA
TAAGAAGGGAAAGGGAACATCTCTGTTTTAGGTGGTGGATTATAATTTTA
CAGTTTAACTGTGTTTTTCTATTGTTCAAATCCCTGTCTTTTTGATTTTG
CAGTTGTTGTTTGAGATTTTTGTTCGGATATTTCTAATGGATTTATTACT
TTTCTT

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular anatomical structure
GO:0005840	ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **INTERPRO**
Term	Definition
IPR000552	Ribosomal_eL44
IPR011332	Ribosomal_zn-bd

Search form