FG532005

EST Overview
NameFG532005
Unique NameFG532005
TypeEST
OrganismPisum sativum (pea)
Sequence length137
Libraries
Library NameType
LIBEST_023217 MeriP Pisum sativum Shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs Swissprot2010-12-28
Homology
BLAST of FG532005 vs. TrEMBL
Match: B9RNW9_RICCO (Stromal cell-derived factor 2, putative OS=Ricinus communis GN=RCOM_0921720 PE=4 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 3.511e-14
Identity = 36/44 (81.82%), Postives = 38/44 (86.36%), Query Frame = 2
Query:    5 HLRASPISGSLEVSCFGGEDDSDTGHYWRLFIEGRG*TWKQDQK 136
            HL ASPISG+LEVSCFGGE DSDTG YWRL IEG G TWKQDQ+
Sbjct:  121 HLHASPISGNLEVSCFGGESDSDTGDYWRLMIEGSGKTWKQDQR 164          
BLAST of FG532005 vs. TrEMBL
Match: B9HAV8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_819624 PE=4 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 7.821e-14
Identity = 35/44 (79.55%), Postives = 39/44 (88.64%), Query Frame = 2
Query:    5 HLRASPISGSLEVSCFGGEDDSDTGHYWRLFIEGRG*TWKQDQK 136
            HL ASPISG+LEVSCFGGE++SDTG YWRL IEG G TWKQDQ+
Sbjct:  118 HLHASPISGNLEVSCFGGENESDTGDYWRLMIEGSGKTWKQDQR 161          
BLAST of FG532005 vs. TrEMBL
Match: A9PIH6_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_835832 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 7.821e-14
Identity = 35/44 (79.55%), Postives = 39/44 (88.64%), Query Frame = 2
Query:    5 HLRASPISGSLEVSCFGGEDDSDTGHYWRLFIEGRG*TWKQDQK 136
            HL ASPISG+LEVSCFGGE++SDTG YWRL IEG G TWKQDQ+
Sbjct:  122 HLHASPISGNLEVSCFGGENESDTGDYWRLLIEGSGKTWKQDQR 165          
BLAST of FG532005 vs. TrEMBL
Match: A9PAE2_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 7.821e-14
Identity = 35/44 (79.55%), Postives = 39/44 (88.64%), Query Frame = 2
Query:    5 HLRASPISGSLEVSCFGGEDDSDTGHYWRLFIEGRG*TWKQDQK 136
            HL ASPISG+LEVSCFGGE++SDTG YWRL IEG G TWKQDQ+
Sbjct:  118 HLHASPISGNLEVSCFGGENESDTGDYWRLMIEGSGKTWKQDQR 161          
BLAST of FG532005 vs. TrEMBL
Match: C6TJ58_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.021e-13
Identity = 35/44 (79.55%), Postives = 38/44 (86.36%), Query Frame = 2
Query:    5 HLRASPISGSLEVSCFGGEDDSDTGHYWRLFIEGRG*TWKQDQK 136
            HL ASPISG+LEVSCFGGE +SDTG YW+L IEG G TWKQDQK
Sbjct:  118 HLHASPISGNLEVSCFGGESESDTGDYWKLIIEGSGKTWKQDQK 161          
BLAST of FG532005 vs. TrEMBL
Match: C6TNG6_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.276e-13
Identity = 34/44 (77.27%), Postives = 38/44 (86.36%), Query Frame = 2
Query:    5 HLRASPISGSLEVSCFGGEDDSDTGHYWRLFIEGRG*TWKQDQK 136
            HL ASPISG+LEVSCFGGE +SDTG YW+L IEG G TWKQDQ+
Sbjct:  124 HLHASPISGNLEVSCFGGESESDTGDYWKLIIEGSGKTWKQDQR 167          
BLAST of FG532005 vs. TrEMBL
Match: C6TG38_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.276e-13
Identity = 34/44 (77.27%), Postives = 38/44 (86.36%), Query Frame = 2
Query:    5 HLRASPISGSLEVSCFGGEDDSDTGHYWRLFIEGRG*TWKQDQK 136
            HL ASPISG+LEVSCFGGE +SDTG YW+L IEG G TWKQDQ+
Sbjct:   74 HLHASPISGNLEVSCFGGESESDTGDYWKLIIEGSGKTWKQDQR 117          
BLAST of FG532005 vs. TrEMBL
Match: D7SUX5_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_8.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00035892001 PE=4 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 5.069e-13
Identity = 34/44 (77.27%), Postives = 37/44 (84.09%), Query Frame = 2
Query:    5 HLRASPISGSLEVSCFGGEDDSDTGHYWRLFIEGRG*TWKQDQK 136
            HL ASPISG+LEVSCFG E +SDTG YWRL IEG G TWKQDQ+
Sbjct:  118 HLHASPISGNLEVSCFGSESESDTGDYWRLLIEGSGKTWKQDQR 161          
BLAST of FG532005 vs. TrEMBL
Match: A5BIP5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_016626 PE=4 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 5.069e-13
Identity = 34/44 (77.27%), Postives = 37/44 (84.09%), Query Frame = 2
Query:    5 HLRASPISGSLEVSCFGGEDDSDTGHYWRLFIEGRG*TWKQDQK 136
            HL ASPISG+LEVSCFG E +SDTG YWRL IEG G TWKQDQ+
Sbjct:   84 HLHASPISGNLEVSCFGSESESDTGDYWRLLIEGSGKTWKQDQR 127          
BLAST of FG532005 vs. TrEMBL
Match: A9NU82_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.129e-12
Identity = 34/44 (77.27%), Postives = 37/44 (84.09%), Query Frame = 2
Query:    5 HLRASPISGSLEVSCFGGEDDSDTGHYWRLFIEGRG*TWKQDQK 136
            HL ASPISG+LEVSCFGGED SDTG +WRL IEG+G  W QDQK
Sbjct:  118 HLHASPISGNLEVSCFGGEDQSDTGDHWRLEIEGKGNVWMQDQK 161          
BLAST of FG532005 vs. SwissProt
Match: SDF2_ARATH (Stromal cell-derived factor 2-like protein OS=Arabidopsis thaliana GN=At2g25110 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.048e-12
Identity = 31/44 (70.45%), Postives = 37/44 (84.09%), Query Frame = 2
Query:    5 HLRASPISGSLEVSCFGGEDDSDTGHYWRLFIEGRG*TWKQDQK 136
            HL ASPISG+LEVSCFG + +SDTG +W+L IEG G TWKQDQ+
Sbjct:  119 HLHASPISGNLEVSCFGDDTNSDTGDHWKLIIEGSGKTWKQDQR 162          
BLAST of FG532005 vs. TAIR peptide
Match: AT2G25110.1 (| Symbols: SDF2, ATSDL, AtSDF2 | stromal cell-derived factor 2-like protein precursor | chr2:10684428-10685838 FORWARD LENGTH=218)

HSP 1 Score: 72.0182 bits (175), Expect = 8.343e-14
Identity = 31/44 (70.45%), Postives = 37/44 (84.09%), Query Frame = 2
Query:    5 HLRASPISGSLEVSCFGGEDDSDTGHYWRLFIEGRG*TWKQDQK 136
            HL ASPISG+LEVSCFG + +SDTG +W+L IEG G TWKQDQ+
Sbjct:  119 HLHASPISGNLEVSCFGDDTNSDTGDHWKLIIEGSGKTWKQDQR 162          
The following BLAST results are available for this feature:
BLAST of FG532005 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B9RNW9_RICCO3.511e-1481.82Stromal cell-derived factor 2, putative OS=Ricinus... [more]
B9HAV8_POPTR7.821e-1479.55Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
A9PIH6_POPTR7.821e-1479.55Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
A9PAE2_POPTR7.821e-1479.55Putative uncharacterized protein OS=Populus tricho... [more]
C6TJ58_SOYBN1.021e-1379.55Putative uncharacterized protein OS=Glycine max PE... [more]
C6TNG6_SOYBN2.276e-1377.27Putative uncharacterized protein OS=Glycine max PE... [more]
C6TG38_SOYBN2.276e-1377.27Putative uncharacterized protein OS=Glycine max PE... [more]
D7SUX5_VITVI5.069e-1377.27Whole genome shotgun sequence of line PN40024, sca... [more]
A5BIP5_VITVI5.069e-1377.27Putative uncharacterized protein OS=Vitis vinifera... [more]
A9NU82_PICSI1.129e-1277.27Putative uncharacterized protein OS=Picea sitchens... [more]
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BLAST of FG532005 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
SDF2_ARATH1.048e-1270.45Stromal cell-derived factor 2-like protein OS=Arab... [more]
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BLAST of FG532005 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT2G25110.18.343e-1470.45| Symbols: SDF2, ATSDL, AtSDF2 | stromal cell-deri... [more]
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Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FG532005 ID=FG532005; Name=FG532005; organism=Pisum sativum; type=EST; length=137bp
CAGGCATTTGCGTGCGTCCCCGATATCAGGCAGTCTTGAGGTCAGCTGCT
TTGGTGGAGAAGATGATTCTGACACCGGGCACTATTGGAGGCTTTTTATA
GAAGGAAGGGGATAGACTTGGAAGCAGGATCAAAAGA
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