FG537323
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FG537323 vs. TrEMBL
Match: B9HG87_POPTR (Chromatin remodeling complex subunit OS=Populus trichocarpa GN=CHR934 PE=4 SV=1) HSP 1 Score: 62.7734 bits (151), Expect = 1.304e-8 Identity = 39/86 (45.35%), Postives = 49/86 (56.98%), Query Frame = 1 Query: 4 SLVQNSDYSSSKIKAVLEVLQSSCRLKANSGNXXXXXXXXXXXXXXXXXVKVTKVTRNYSECTTGGPLKAIIFSQWTTMLDLVETS 261 S+V +Y+SSKIKAVLEV+QS C KA S + + YS +T GP+KAI+FSQWT+MLDLVE S Sbjct: 715 SIVLQHEYNSSKIKAVLEVIQSHC--KAGS-----------PISEFNGSAGCIETSMAYSRLSTEGPIKAIVFSQWTSMLDLVEFS 787
BLAST of FG537323 vs. TrEMBL
Match: Q9SX56_ARATH (F14I3.1 protein (Fragment) OS=Arabidopsis thaliana GN=F14I3.1 PE=4 SV=1) HSP 1 Score: 58.5362 bits (140), Expect = 2.459e-7 Identity = 37/91 (40.66%), Postives = 47/91 (51.65%), Query Frame = 1 Query: 4 SLVQNSDYSSSKIKAVLEVLQS-----SCRLKANSGNXXXXXXXXXXXXXXXXXVKVTKVTRNYSECTTGGPLKAIIFSQWTTMLDLVETS 261 S+ QN ++SSSKIKAVL++LQS + N V + + T S + GGP+K IIFSQWT MLDLVE S Sbjct: 836 SVFQNGEFSSSKIKAVLDILQSLSNQGTSNSTQNGQMASSSQQPNDDDDDDDDDVTIVEKTSLKSTPSNGGPIKTIIFSQWTGMLDLVELS 926
BLAST of FG537323 vs. TrEMBL
Match: Q9LPR7_ARATH (F11F12.23 protein OS=Arabidopsis thaliana GN=F11F12.23 PE=4 SV=1) HSP 1 Score: 58.5362 bits (140), Expect = 2.459e-7 Identity = 37/91 (40.66%), Postives = 47/91 (51.65%), Query Frame = 1 Query: 4 SLVQNSDYSSSKIKAVLEVLQS-----SCRLKANSGNXXXXXXXXXXXXXXXXXVKVTKVTRNYSECTTGGPLKAIIFSQWTTMLDLVETS 261 S+ QN ++SSSKIKAVL++LQS + N V + + T S + GGP+K IIFSQWT MLDLVE S Sbjct: 836 SVFQNGEFSSSKIKAVLDILQSLSNQGTSNSTQNGQMASSSQQPNDDDDDDDDDVTIVEKTSLKSTPSNGGPIKTIIFSQWTGMLDLVELS 926
BLAST of FG537323 vs. TrEMBL
Match: Q94BR5_ARATH (Putative DNA-binding protein OS=Arabidopsis thaliana GN=At1g50410 PE=2 SV=1) HSP 1 Score: 58.5362 bits (140), Expect = 2.459e-7 Identity = 37/91 (40.66%), Postives = 47/91 (51.65%), Query Frame = 1 Query: 4 SLVQNSDYSSSKIKAVLEVLQS-----SCRLKANSGNXXXXXXXXXXXXXXXXXVKVTKVTRNYSECTTGGPLKAIIFSQWTTMLDLVETS 261 S+ QN ++SSSKIKAVL++LQS + N V + + T S + GGP+K IIFSQWT MLDLVE S Sbjct: 755 SVFQNGEFSSSKIKAVLDILQSLSNQGTSNSTQNGQMASSSQQPNDDDDDDDDDVTIVEKTSLKSTPSNGGPIKTIIFSQWTGMLDLVELS 845
BLAST of FG537323 vs. TAIR peptide
Match: AT1G50410.1 (| Symbols: | SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related | chr1:18672828-18677365 FORWARD LENGTH=981) HSP 1 Score: 58.5362 bits (140), Expect = 9.583e-10 Identity = 37/91 (40.66%), Postives = 47/91 (51.65%), Query Frame = 1 Query: 4 SLVQNSDYSSSKIKAVLEVLQS-----SCRLKANSGNXXXXXXXXXXXXXXXXXVKVTKVTRNYSECTTGGPLKAIIFSQWTTMLDLVETS 261 S+ QN ++SSSKIKAVL++LQS + N V + + T S + GGP+K IIFSQWT MLDLVE S Sbjct: 755 SVFQNGEFSSSKIKAVLDILQSLSNQGTSNSTQNGQMASSSQQPNDDDDDDDDDVTIVEKTSLKSTPSNGGPIKTIIFSQWTGMLDLVELS 845
BLAST of FG537323 vs. TAIR peptide
Match: AT3G20010.1 (| Symbols: | SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related | chr3:6971352-6976340 FORWARD LENGTH=1047) HSP 1 Score: 50.8322 bits (120), Expect = 1.998e-7 Identity = 32/84 (38.10%), Postives = 44/84 (52.38%), Query Frame = 1 Query: 4 SLVQNSDYSSSKIKAVLEVLQSSCRLKANSGNXXXXXXXXXXXXXXXXXVKVTKVTRNYSECTTGGPLKAIIFSQWTTMLDLVE 255 S+ Q D+ SSKIKAVL++LQS + + + V + + R +S + G +K IIFSQWT MLDLVE Sbjct: 827 SVFQKRDFCSSKIKAVLDILQSLSQ-PDSPNSAQHGQMPSSSRPYDDDDVTIVEPMRLHSSSPSQGAVKTIIFSQWTGMLDLVE 909 The following BLAST results are available for this feature:
BLAST of FG537323 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl) Total hits: 4
BLAST of FG537323 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide) Total hits: 2
InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FG537323 ID=FG537323; Name=FG537323; organism=Pisum sativum; type=EST; length=263bpback to top |