FG537323

EST Overview
NameFG537323
Unique NameFG537323
TypeEST
OrganismPisum sativum (pea)
Sequence length263
Libraries
Library NameType
LIBEST_023215 MeriZ Pisum sativum Shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
InterProScan analysis for Pisum sativum unigene v12010-12-29
Homology
BLAST of FG537323 vs. TrEMBL
Match: B9HG87_POPTR (Chromatin remodeling complex subunit OS=Populus trichocarpa GN=CHR934 PE=4 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 1.304e-8
Identity = 39/86 (45.35%), Postives = 49/86 (56.98%), Query Frame = 1
Query:    4 SLVQNSDYSSSKIKAVLEVLQSSCRLKANSGNXXXXXXXXXXXXXXXXXVKVTKVTRNYSECTTGGPLKAIIFSQWTTMLDLVETS 261
            S+V   +Y+SSKIKAVLEV+QS C  KA S                       + +  YS  +T GP+KAI+FSQWT+MLDLVE S
Sbjct:  715 SIVLQHEYNSSKIKAVLEVIQSHC--KAGS-----------PISEFNGSAGCIETSMAYSRLSTEGPIKAIVFSQWTSMLDLVEFS 787          
BLAST of FG537323 vs. TrEMBL
Match: Q9SX56_ARATH (F14I3.1 protein (Fragment) OS=Arabidopsis thaliana GN=F14I3.1 PE=4 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 2.459e-7
Identity = 37/91 (40.66%), Postives = 47/91 (51.65%), Query Frame = 1
Query:    4 SLVQNSDYSSSKIKAVLEVLQS-----SCRLKANSGNXXXXXXXXXXXXXXXXXVKVTKVTRNYSECTTGGPLKAIIFSQWTTMLDLVETS 261
            S+ QN ++SSSKIKAVL++LQS     +     N                    V + + T   S  + GGP+K IIFSQWT MLDLVE S
Sbjct:  836 SVFQNGEFSSSKIKAVLDILQSLSNQGTSNSTQNGQMASSSQQPNDDDDDDDDDVTIVEKTSLKSTPSNGGPIKTIIFSQWTGMLDLVELS 926          
BLAST of FG537323 vs. TrEMBL
Match: Q9LPR7_ARATH (F11F12.23 protein OS=Arabidopsis thaliana GN=F11F12.23 PE=4 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 2.459e-7
Identity = 37/91 (40.66%), Postives = 47/91 (51.65%), Query Frame = 1
Query:    4 SLVQNSDYSSSKIKAVLEVLQS-----SCRLKANSGNXXXXXXXXXXXXXXXXXVKVTKVTRNYSECTTGGPLKAIIFSQWTTMLDLVETS 261
            S+ QN ++SSSKIKAVL++LQS     +     N                    V + + T   S  + GGP+K IIFSQWT MLDLVE S
Sbjct:  836 SVFQNGEFSSSKIKAVLDILQSLSNQGTSNSTQNGQMASSSQQPNDDDDDDDDDVTIVEKTSLKSTPSNGGPIKTIIFSQWTGMLDLVELS 926          
BLAST of FG537323 vs. TrEMBL
Match: Q94BR5_ARATH (Putative DNA-binding protein OS=Arabidopsis thaliana GN=At1g50410 PE=2 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 2.459e-7
Identity = 37/91 (40.66%), Postives = 47/91 (51.65%), Query Frame = 1
Query:    4 SLVQNSDYSSSKIKAVLEVLQS-----SCRLKANSGNXXXXXXXXXXXXXXXXXVKVTKVTRNYSECTTGGPLKAIIFSQWTTMLDLVETS 261
            S+ QN ++SSSKIKAVL++LQS     +     N                    V + + T   S  + GGP+K IIFSQWT MLDLVE S
Sbjct:  755 SVFQNGEFSSSKIKAVLDILQSLSNQGTSNSTQNGQMASSSQQPNDDDDDDDDDVTIVEKTSLKSTPSNGGPIKTIIFSQWTGMLDLVELS 845          
BLAST of FG537323 vs. TAIR peptide
Match: AT1G50410.1 (| Symbols: | SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related | chr1:18672828-18677365 FORWARD LENGTH=981)

HSP 1 Score: 58.5362 bits (140), Expect = 9.583e-10
Identity = 37/91 (40.66%), Postives = 47/91 (51.65%), Query Frame = 1
Query:    4 SLVQNSDYSSSKIKAVLEVLQS-----SCRLKANSGNXXXXXXXXXXXXXXXXXVKVTKVTRNYSECTTGGPLKAIIFSQWTTMLDLVETS 261
            S+ QN ++SSSKIKAVL++LQS     +     N                    V + + T   S  + GGP+K IIFSQWT MLDLVE S
Sbjct:  755 SVFQNGEFSSSKIKAVLDILQSLSNQGTSNSTQNGQMASSSQQPNDDDDDDDDDVTIVEKTSLKSTPSNGGPIKTIIFSQWTGMLDLVELS 845          
BLAST of FG537323 vs. TAIR peptide
Match: AT3G20010.1 (| Symbols: | SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related | chr3:6971352-6976340 FORWARD LENGTH=1047)

HSP 1 Score: 50.8322 bits (120), Expect = 1.998e-7
Identity = 32/84 (38.10%), Postives = 44/84 (52.38%), Query Frame = 1
Query:    4 SLVQNSDYSSSKIKAVLEVLQSSCRLKANSGNXXXXXXXXXXXXXXXXXVKVTKVTRNYSECTTGGPLKAIIFSQWTTMLDLVE 255
            S+ Q  D+ SSKIKAVL++LQS  +   +  +                 V + +  R +S   + G +K IIFSQWT MLDLVE
Sbjct:  827 SVFQKRDFCSSKIKAVLDILQSLSQ-PDSPNSAQHGQMPSSSRPYDDDDVTIVEPMRLHSSSPSQGAVKTIIFSQWTGMLDLVE 909          
The following BLAST results are available for this feature:
BLAST of FG537323 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 4
Match NameE-valueIdentityDescription
B9HG87_POPTR1.304e-845.35Chromatin remodeling complex subunit OS=Populus tr... [more]
Q9SX56_ARATH2.459e-740.66F14I3.1 protein (Fragment) OS=Arabidopsis thaliana... [more]
Q9LPR7_ARATH2.459e-740.66F11F12.23 protein OS=Arabidopsis thaliana GN=F11F1... [more]
Q94BR5_ARATH2.459e-740.66Putative DNA-binding protein OS=Arabidopsis thalia... [more]
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BLAST of FG537323 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT1G50410.19.583e-1040.66| Symbols: | SNF2 domain-containing protein / hel... [more]
AT3G20010.11.998e-738.10| Symbols: | SNF2 domain-containing protein / hel... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 34..50
score
NoneNo IPR availableSEGsegsegcoord: 10..26
score

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FG537323 ID=FG537323; Name=FG537323; organism=Pisum sativum; type=EST; length=263bp
TATTCACTAGTACAAAATAGTGATTACAGCTCATCTAAAATCAAAGCCGT
CCTTGAAGTTCTGCAGTCAAGTTGCAGATTGAAGGCTAATTCTGGCAATA
TAGATTCACCGCCTTCTGACGACTCAGATATTGAAGATTTTGATTCAGAT
GTTAAGGTTACAAAAGTCACAAGAAATTATTCAGAGTGCACAACTGGTGG
ACCGCTAAAGGCCATCATTTTTTCTCAATGGACTACCATGTTGGACTTAG
TTGAGACATCAAT
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