EX569631

EST Overview
NameEX569631
Unique NameEX569631
TypeEST
OrganismPisum sativum (pea)
Sequence length401
Libraries
Library NameType
LIBEST_021973 Pisum sativum shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
InterProScan analysis for Pisum sativum unigene v12010-12-29
Homology
BLAST of EX569631 vs. TrEMBL
Match: D7T8P8_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_11.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00011705001 PE=4 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 7.789e-9
Identity = 34/74 (45.95%), Postives = 44/74 (59.46%), Query Frame = 2
Query:    2 KDSDAKKTTMDLFLGQAF---EGVMQKKLRETGEWLGENGETRFRSTKTRKGILVFAFQWMMPIWVLLFLIASG 214
            + SD  KT  DL L  +    EG ++KKLRETGEW+ +  E   RS    K IL+  F W++P W LL L+ASG
Sbjct:  104 RGSDQNKTLFDLLLSNSIGKTEGSVEKKLRETGEWIIDRAEGTSRSAA--KQILMVTFLWVLPTWTLLLLVASG 175          
BLAST of EX569631 vs. TrEMBL
Match: B9SP69_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0629250 PE=4 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 1.329e-8
Identity = 28/56 (50.00%), Postives = 43/56 (76.79%), Query Frame = 2
Query:   56 EGVMQKKLRETGEWLGENGETRFRSTKTRKGILVFAFQWMMPIWVLLFLIASGAIK 223
            EG ++KKLRETGEWL +  E +FRS  + K IL+F F+W++PI++ +FL+ SG ++
Sbjct:  112 EGSVEKKLRETGEWLTDKTEGQFRS--SGKQILMFFFKWVLPIYIFMFLVTSGIVE 165          
BLAST of EX569631 vs. TrEMBL
Match: B9HW45_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_658751 PE=4 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 1.469e-7
Identity = 32/74 (43.24%), Postives = 45/74 (60.81%), Query Frame = 2
Query:    2 KDSDAKKTTMDLFLGQAFEGVMQKKLRETGEWLGENGETRFRSTKTRKGILVFAFQWMMPIWVLLFLIASGAIK 223
            K    KK  M  F+    EG ++KKLRETGEW+    E  FRS   R  IL+F+F+W +P+++ +  +ASG IK
Sbjct:   99 KKEKKKKKKMSGFME---EGPVEKKLRETGEWVTTKTEGGFRSNGKR--ILMFSFKWAIPLYIFMVFVASGVIK 167          
BLAST of EX569631 vs. TAIR peptide
Match: AT2G01590.1 (| Symbols: CRR3 | chlororespiratory reduction 3 | chr2:266675-267379 FORWARD LENGTH=174)

HSP 1 Score: 55.0694 bits (131), Expect = 1.466e-8
Identity = 29/66 (43.94%), Postives = 41/66 (62.12%), Query Frame = 2
Query:   32 DLFLGQA--FEGVMQKKLRETGEWLGENGETRFRSTKTRKGILVFAFQWMMPIWVLLFLIASGAIK 223
            +L LG A  FE  ++KKLRE GE      E + RS+   K +L+F  QW++PIW++  L+A G IK
Sbjct:   98 ELLLGHANKFESKIEKKLREIGEIFVARTEPKLRSSG--KPVLMFTIQWILPIWIMSLLVACGVIK 161          
The following BLAST results are available for this feature:
BLAST of EX569631 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 3
Match NameE-valueIdentityDescription
D7T8P8_VITVI7.789e-945.95Whole genome shotgun sequence of line PN40024, sca... [more]
B9SP69_RICCO1.329e-850.00Putative uncharacterized protein OS=Ricinus commun... [more]
B9HW45_POPTR1.469e-743.24Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
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BLAST of EX569631 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT2G01590.11.466e-843.94| Symbols: CRR3 | chlororespiratory reduction 3 | ... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 16..32
score

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>EX569631 ID=EX569631; Name=EX569631; organism=Pisum sativum; type=EST; length=401bp
GAAAGATTCAGATGCGAAGAAGACTACAATGGATTTGTTCTTGGGGCAAG
CATTTGAAGGAGTGATGCAGAAAAAGCTGAGGGAAACAGGAGAGTGGCTT
GGTGAAAATGGAGAGACCAGATTCCGCTCCACTAAGACTAGAAAAGGAAT
TCTGGTGTTTGCGTTTCAATGGATGATGCCAATTTGGGTTTTATTATTTC
TAATAGCATCTGGAGCCATCAAGTTACCATTTAGTACCCCTTTTCTTGAT
GACCTCCTCTTGTGAACATTGGCCAGTTGCTTTTGTAGATTGAATAATTA
TTAATTACTCAAAAGTTCAAAGGAACACTGCATACATTTGTATTTAATAG
TTTAACATTTTGGAAGTTCAGTCTTTTGGGAGTTGTACAGTCACTTCACT
T
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