FG529124
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FG529124 vs. TrEMBL
Match: B9HYC3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_884732 PE=4 SV=1) HSP 1 Score: 64.6994 bits (156), Expect = 6.760e-9 Identity = 34/73 (46.58%), Postives = 39/73 (53.42%), Query Frame = 2 Query: 194 PAVEVSKTISLSRNPSLTS--------QCCTICLGNEKDMAFGCGHMTCRECGSXXXXXXXXXXXXTNRIRLF 388 P V S+ L R P+ S Q C ICL N KD+AFGCGHMTCR+CGS T+RIRLF Sbjct: 323 PPVPYSRRPVLDREPTHVSSPVLDERTQACPICLTNRKDLAFGCGHMTCRDCGSRVSSCPICRRPITSRIRLF 395
BLAST of FG529124 vs. TrEMBL
Match: D7T109_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_85.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00036707001 PE=4 SV=1) HSP 1 Score: 61.6178 bits (148), Expect = 5.723e-8 Identity = 30/70 (42.86%), Postives = 42/70 (60.00%), Query Frame = 2 Query: 185 SKVPAVEVSKTISLSRNPSLTSQCCTICLGNEKDMAFGCGHMTCRECGSXXXXXXXXXXXXTNRIRLFPG 394 S++P+ S+ +S +R+ +Q C ICL + KDMAFGCGHMTCREC S NR+R++ G Sbjct: 5598 SRMPSRMPSRQLSNTRDEG--NQACPICLTSVKDMAFGCGHMTCRECASKVSNCPICREPIRNRLRVYTG 5665
BLAST of FG529124 vs. TrEMBL
Match: B9SNL7_RICCO (Copine, putative OS=Ricinus communis GN=RCOM_0766490 PE=4 SV=1) HSP 1 Score: 60.8474 bits (146), Expect = 9.762e-8 Identity = 35/85 (41.18%), Postives = 42/85 (49.41%), Query Frame = 2 Query: 173 STGESKV-----PAVEVSKTISLSRNPSLTS--------QCCTICLGNEKDMAFGCGHMTCRECGSXXXXXXXXXXXXTNRIRLF 388 +TG SK P V + ++ PS S Q C ICL N KD+AF CGHMTCRECGS +NR+RLF Sbjct: 128 TTGRSKKIVPRPPPVPYAHRPTIDHEPSNVSSPVEDERTQACPICLTNAKDLAFDCGHMTCRECGSRVSNCPICRRRISNRLRLF 212
BLAST of FG529124 vs. TrEMBL
Match: B9H4B2_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_207134 PE=4 SV=1) HSP 1 Score: 58.5362 bits (140), Expect = 4.845e-7 Identity = 26/66 (39.39%), Postives = 35/66 (53.03%), Query Frame = 2 Query: 191 VPAVEVSKTISLSRNPSLTSQCCTICLGNEKDMAFGCGHMTCRECGSXXXXXXXXXXXXTNRIRLF 388 +P + K + + + C ICL N KD+AFGCGHMTCR+CG+ T R+RLF Sbjct: 285 IPHMTNFKPVQPTAPTASVEPVCPICLANPKDLAFGCGHMTCRDCGASISACPLCRQPITTRLRLF 350
BLAST of FG529124 vs. TrEMBL
Match: B9HI27_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_420659 PE=4 SV=1) HSP 1 Score: 57.7658 bits (138), Expect = 8.264e-7 Identity = 34/85 (40.00%), Postives = 42/85 (49.41%), Query Frame = 2 Query: 173 STGESKV-----PAVEVSKTISLSRNPSLTS--------QCCTICLGNEKDMAFGCGHMTCRECGSXXXXXXXXXXXXTNRIRLF 388 STG +K P V S R P+ S Q C ICL + KD+AFGCGHMTCR+CGS T+R++LF Sbjct: 257 STGRAKKIVPRPPPVPYSSRSVQCREPTNVSSPVLDERTQACPICLTDGKDLAFGCGHMTCRDCGSRVSNCPICRQPITSRMKLF 341
BLAST of FG529124 vs. TAIR peptide
Match: AT1G79380.1 (| Symbols: | Ca(2)-dependent phospholipid-binding protein (Copine) family | chr1:29860812-29863023 FORWARD LENGTH=401) HSP 1 Score: 55.4546 bits (132), Expect = 2.919e-8 Identity = 23/47 (48.94%), Postives = 29/47 (61.70%), Query Frame = 2 Query: 248 SQCCTICLGNEKDMAFGCGHMTCRECGSXXXXXXXXXXXXTNRIRLF 388 +Q C ICL N KD+AF CGHMTC +CGS TNR++L+ Sbjct: 354 TQSCPICLTNRKDVAFSCGHMTCGDCGSKISNCPICRVRITNRLKLY 400
BLAST of FG529124 vs. TAIR peptide
Match: AT5G63970.2 (| Symbols: | Copine (Calcium-dependent phospholipid-binding protein) family | chr5:25607006-25608916 REVERSE LENGTH=367) HSP 1 Score: 53.1434 bits (126), Expect = 1.449e-7 Identity = 31/82 (37.80%), Postives = 37/82 (45.12%), Query Frame = 2 Query: 143 EKIAITSSVMSTGESKVPAVEVSKTISLSRNPSLTSQCCTICLGNEKDMAFGCGHMTCRECGSXXXXXXXXXXXXTNRIRLF 388 E I ++V S E S ++ S P C ICL N KDMAF CGH TC+ECG T RIRL+ Sbjct: 290 EVIERDNAVRSVPNQMTETAEKSDRLAPSTVP-----VCPICLTNPKDMAFSCGHTTCKECGVVITTCPLCRQPITTRIRLY 366
BLAST of FG529124 vs. TAIR peptide
Match: AT5G63970.1 (| Symbols: | Copine (Calcium-dependent phospholipid-binding protein) family | chr5:25607006-25608916 REVERSE LENGTH=367) HSP 1 Score: 53.1434 bits (126), Expect = 1.449e-7 Identity = 31/82 (37.80%), Postives = 37/82 (45.12%), Query Frame = 2 Query: 143 EKIAITSSVMSTGESKVPAVEVSKTISLSRNPSLTSQCCTICLGNEKDMAFGCGHMTCRECGSXXXXXXXXXXXXTNRIRLF 388 E I ++V S E S ++ S P C ICL N KDMAF CGH TC+ECG T RIRL+ Sbjct: 290 EVIERDNAVRSVPNQMTETAEKSDRLAPSTVP-----VCPICLTNPKDMAFSCGHTTCKECGVVITTCPLCRQPITTRIRLY 366
BLAST of FG529124 vs. TAIR peptide
Match: AT5G14420.2 (| Symbols: RGLG2 | RING domain ligase2 | chr5:4648355-4650563 REVERSE LENGTH=468) HSP 1 Score: 52.7582 bits (125), Expect = 1.892e-7 Identity = 23/47 (48.94%), Postives = 26/47 (55.32%), Query Frame = 2 Query: 248 SQCCTICLGNEKDMAFGCGHMTCRECGSXXXXXXXXXXXXTNRIRLF 388 +Q C ICL N KDMAFGCGH TC ECG RI+L+ Sbjct: 422 NQLCPICLSNPKDMAFGCGHQTCCECGPDLQMCPICRAPIQTRIKLY 468
BLAST of FG529124 vs. TAIR peptide
Match: AT5G14420.4 (| Symbols: RGLG2 | RING domain ligase2 | chr5:4648355-4650563 REVERSE LENGTH=468) HSP 1 Score: 52.7582 bits (125), Expect = 1.892e-7 Identity = 23/47 (48.94%), Postives = 26/47 (55.32%), Query Frame = 2 Query: 248 SQCCTICLGNEKDMAFGCGHMTCRECGSXXXXXXXXXXXXTNRIRLF 388 +Q C ICL N KDMAFGCGH TC ECG RI+L+ Sbjct: 422 NQLCPICLSNPKDMAFGCGHQTCCECGPDLQMCPICRAPIQTRIKLY 468
BLAST of FG529124 vs. TAIR peptide
Match: AT5G14420.3 (| Symbols: RGLG2 | RING domain ligase2 | chr5:4648355-4650563 REVERSE LENGTH=468) HSP 1 Score: 52.7582 bits (125), Expect = 1.892e-7 Identity = 23/47 (48.94%), Postives = 26/47 (55.32%), Query Frame = 2 Query: 248 SQCCTICLGNEKDMAFGCGHMTCRECGSXXXXXXXXXXXXTNRIRLF 388 +Q C ICL N KDMAFGCGH TC ECG RI+L+ Sbjct: 422 NQLCPICLSNPKDMAFGCGHQTCCECGPDLQMCPICRAPIQTRIKLY 468
BLAST of FG529124 vs. TAIR peptide
Match: AT5G14420.1 (| Symbols: RGLG2 | RING domain ligase2 | chr5:4648355-4650563 REVERSE LENGTH=468) HSP 1 Score: 52.7582 bits (125), Expect = 1.892e-7 Identity = 23/47 (48.94%), Postives = 26/47 (55.32%), Query Frame = 2 Query: 248 SQCCTICLGNEKDMAFGCGHMTCRECGSXXXXXXXXXXXXTNRIRLF 388 +Q C ICL N KDMAFGCGH TC ECG RI+L+ Sbjct: 422 NQLCPICLSNPKDMAFGCGHQTCCECGPDLQMCPICRAPIQTRIKLY 468
BLAST of FG529124 vs. TAIR peptide
Match: AT3G01650.1 (| Symbols: RGLG1 | RING domain ligase1 | chr3:242734-245062 FORWARD LENGTH=489) HSP 1 Score: 50.8322 bits (120), Expect = 7.190e-7 Identity = 28/76 (36.84%), Postives = 36/76 (47.37%), Query Frame = 2 Query: 173 STGESKVPAVEVSKTISLSRNPSLTS----QCCTICLGNEKDMAFGCGHMTCRECGSXXXXXXXXXXXXTNRIRLF 388 S S++P E S + ++S Q C ICL N K+MAFGCGH TC ECG RI+L+ Sbjct: 414 SFSSSRIPNFEPSVPPYPFESKQMSSADDIQLCPICLSNPKNMAFGCGHQTCCECGPDLKVCPICRAPIQTRIKLY 489 The following BLAST results are available for this feature:
BLAST of FG529124 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl) Total hits: 5
BLAST of FG529124 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide) Total hits: 8
InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FG529124 ID=FG529124; Name=FG529124; organism=Pisum sativum; type=EST; length=640bpback to top |