FG531132

EST Overview


Name	FG531132
Unique Name	FG531132
Type	EST
Organism	Pisum sativum (pea)
Sequence length	487

Libraries


Library Name	Type
LIBEST_023217 MeriP Pisum sativum Shoot apical meristem ESTs	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Pisum sativum unigene v1	Pisum sativum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Pisum sativum unigene v1	2010-12-27
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Pisum sativum unigene v1 vs Trembl	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs Swissprot	2010-12-28
InterProScan analysis for Pisum sativum unigene v1	2010-12-29

Homology

[Close]

BLAST of FG531132 vs. TrEMBL
Match: B9SQC0_RICCO (Coatomer beta subunit, putative OS=Ricinus communis GN=RCOM_0980380 PE=4 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.311e-13
Identity = 38/45 (84.44%), Postives = 41/45 (91.11%), Query Frame = 1

Query:    1 EQNGEDGSQEEAVVVDA*STDGAVLVNGSEADEEWGTNNEGALSA 135
            E NGE+GSQEEAVVVDA STDGAVLVNG+EA+EEWGTNNEG  SA
Sbjct:  870 EHNGEEGSQEEAVVVDADSTDGAVLVNGNEAEEEWGTNNEGTPSA 914

[Close]

BLAST of FG531132 vs. TrEMBL
Match: A9PF13_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_756823 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.311e-13
Identity = 38/45 (84.44%), Postives = 41/45 (91.11%), Query Frame = 1

Query:    1 EQNGEDGSQEEAVVVDA*STDGAVLVNGSEADEEWGTNNEGALSA 135
            EQNGE+GSQEEAVVVDA STDGAVLVNG+E +EEWGTNNEG  SA
Sbjct:  426 EQNGEEGSQEEAVVVDAESTDGAVLVNGNEPEEEWGTNNEGTPSA 470

[Close]

BLAST of FG531132 vs. TrEMBL
Match: B9GEK6_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_841719 PE=4 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.956e-12
Identity = 37/45 (82.22%), Postives = 40/45 (88.89%), Query Frame = 1

Query:    1 EQNGEDGSQEEAVVVDA*STDGAVLVNGSEADEEWGTNNEGALSA 135
            EQNGE+GSQEEAVVVDA STDGAVLVNG+E +EEWGTNNE   SA
Sbjct:  878 EQNGEEGSQEEAVVVDADSTDGAVLVNGNEPEEEWGTNNEETPSA 922

[Close]

BLAST of FG531132 vs. TrEMBL
Match: D7U0M1_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_2.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00017121001 PE=4 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.079e-10
Identity = 35/48 (72.92%), Postives = 39/48 (81.25%), Query Frame = 1

Query:    4 QNGEDGSQE----EAVVVDA*STDGAVLVNGSEADEEWGTNNEGALSA 135
            QNGE+  +E    EAVVVDA STDGAVLVNG+EA+EEWGTNNEG  SA
Sbjct:  886 QNGEESQEEHNGEEAVVVDADSTDGAVLVNGNEAEEEWGTNNEGTPSA 933

[Close]

BLAST of FG531132 vs. TrEMBL
Match: A5AWP2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_004513 PE=4 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.079e-10
Identity = 35/48 (72.92%), Postives = 39/48 (81.25%), Query Frame = 1

Query:    4 QNGEDGSQE----EAVVVDA*STDGAVLVNGSEADEEWGTNNEGALSA 135
            QNGE+  +E    EAVVVDA STDGAVLVNG+EA+EEWGTNNEG  SA
Sbjct:  854 QNGEESQEEHNGEEAVVVDADSTDGAVLVNGNEAEEEWGTNNEGTPSA 901

[Close]

BLAST of FG531132 vs. TrEMBL
Match: D7KJG4_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_474357 PE=4 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 1.714e-8
Identity = 31/45 (68.89%), Postives = 35/45 (77.78%), Query Frame = 1

Query:    1 EQNGEDGSQEEAVVVDA*STDGAVLVNGSEADEEWGTNNEGALSA 135
            E + E  ++EE  +VD  STDGAVLVNGSEADEEWGTNNEG  SA
Sbjct:  878 EHHEEKEAEEEEGIVDGDSTDGAVLVNGSEADEEWGTNNEGNPSA 922

[Close]

BLAST of FG531132 vs. TrEMBL
Match: D7L4Z6_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_479052 PE=4 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 1.451e-7
Identity = 30/45 (66.67%), Postives = 34/45 (75.56%), Query Frame = 1

Query:    1 EQNGEDGSQEEAVVVDA*STDGAVLVNGSEADEEWGTNNEGALSA 135
            E+  E+   EE  VVDA STDGAVLVNGSE +EEWGTNN+G  SA
Sbjct:  874 EEQQEEEVNEEEGVVDADSTDGAVLVNGSEGEEEWGTNNKGNPSA 918

[Close]

BLAST of FG531132 vs. TrEMBL
Match: C0Z2S5_ARATH (AT3G15980 protein OS=Arabidopsis thaliana GN=AT3G15980 PE=2 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 1.451e-7
Identity = 30/45 (66.67%), Postives = 34/45 (75.56%), Query Frame = 1

Query:    1 EQNGEDGSQEEAVVVDA*STDGAVLVNGSEADEEWGTNNEGALSA 135
            E+  E+   EE  VVDA STDGAVLVNGSE +EEWGTNN+G  SA
Sbjct:  729 EEQQEEEVNEEEGVVDADSTDGAVLVNGSEGEEEWGTNNKGNPSA 773

[Close]

BLAST of FG531132 vs. TrEMBL
Match: B9DFE3_ARATH (AT3G15980 protein OS=Arabidopsis thaliana GN=AT3G15980 PE=2 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 1.451e-7
Identity = 30/45 (66.67%), Postives = 34/45 (75.56%), Query Frame = 1

Query:    1 EQNGEDGSQEEAVVVDA*STDGAVLVNGSEADEEWGTNNEGALSA 135
            E+  E+   EE  VVDA STDGAVLVNGSE +EEWGTNN+G  SA
Sbjct:  874 EEQQEEEVNEEEGVVDADSTDGAVLVNGSEGEEEWGTNNKGNPSA 918

[Close]

BLAST of FG531132 vs. SwissProt
Match: COB22_ARATH (Coatomer subunit beta'-2 OS=Arabidopsis thaliana GN=At1g52360 PE=2 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 1.264e-9
Identity = 31/45 (68.89%), Postives = 35/45 (77.78%), Query Frame = 1

Query:    1 EQNGEDGSQEEAVVVDA*STDGAVLVNGSEADEEWGTNNEGALSA 135
            E + E  ++EE  +VD  STDGAVLVNGSEADEEWGTNNEG  SA
Sbjct:  882 EHHEEKEAEEEEGIVDGDSTDGAVLVNGSEADEEWGTNNEGNPSA 926

[Close]

BLAST of FG531132 vs. SwissProt
Match: COB23_ORYSJ (Putative coatomer subunit beta'-3 OS=Oryza sativa subsp. japonica GN=Os02g0209000 PE=3 SV=2)

HSP 1 Score: 55.0694 bits (131), Expect = 2.019e-7
Identity = 27/47 (57.45%), Postives = 36/47 (76.60%), Query Frame = 1

Query:    1 EQNGEDGSQEEAVVVDA*---STDGAVLVNGSEADEEWGTNNEGALS 132
            E+NG + SQE+AV VD     STDG VLVNG++ +E+WGTNNE +L+
Sbjct:  864 EENGVEESQEDAVEVDVEADGSTDGTVLVNGNDTEEQWGTNNEESLA 910

[Close]

BLAST of FG531132 vs. SwissProt
Match: COB22_ORYSJ (Coatomer subunit beta'-2 OS=Oryza sativa subsp. japonica GN=Os02g0209100 PE=2 SV=1)

HSP 1 Score: 55.0694 bits (131), Expect = 2.019e-7
Identity = 27/43 (62.79%), Postives = 34/43 (79.07%), Query Frame = 1

Query:    1 EQNGEDGSQEEAVVVDA*---STDGAVLVNGSEADEEWGTNNE 120
            E+NG + SQE+AV VD     STDGAVLVNG++ +E+WGTNNE
Sbjct:  864 EENGVEESQEDAVEVDVEADGSTDGAVLVNGNDTEEQWGTNNE 906

[Close]

BLAST of FG531132 vs. TAIR peptide
Match: AT1G52360.2 (| Symbols: | Coatomer, beta' subunit | chr1:19499420-19505397 FORWARD LENGTH=970)

HSP 1 Score: 62.3882 bits (150), Expect = 1.447e-10
Identity = 31/45 (68.89%), Postives = 35/45 (77.78%), Query Frame = 1

Query:    1 EQNGEDGSQEEAVVVDA*STDGAVLVNGSEADEEWGTNNEGALSA 135
            E + E  ++EE  +VD  STDGAVLVNGSEADEEWGTNNEG  SA
Sbjct:  926 EHHEEKEAEEEEGIVDGDSTDGAVLVNGSEADEEWGTNNEGNPSA 970

[Close]

BLAST of FG531132 vs. TAIR peptide
Match: AT1G52360.1 (| Symbols: | Coatomer, beta' subunit | chr1:19499282-19505397 FORWARD LENGTH=926)

HSP 1 Score: 62.3882 bits (150), Expect = 1.447e-10
Identity = 31/45 (68.89%), Postives = 35/45 (77.78%), Query Frame = 1

Query:    1 EQNGEDGSQEEAVVVDA*STDGAVLVNGSEADEEWGTNNEGALSA 135
            E + E  ++EE  +VD  STDGAVLVNGSEADEEWGTNNEG  SA
Sbjct:  882 EHHEEKEAEEEEGIVDGDSTDGAVLVNGSEADEEWGTNNEGNPSA 926

[Close]

BLAST of FG531132 vs. TAIR peptide
Match: AT3G15980.5 (| Symbols: | Coatomer, beta' subunit | chr3:5412015-5418313 REVERSE LENGTH=930)

HSP 1 Score: 59.3066 bits (142), Expect = 1.225e-9
Identity = 30/45 (66.67%), Postives = 34/45 (75.56%), Query Frame = 1

Query:    1 EQNGEDGSQEEAVVVDA*STDGAVLVNGSEADEEWGTNNEGALSA 135
            E+  E+   EE  VVDA STDGAVLVNGSE +EEWGTNN+G  SA
Sbjct:  886 EEQQEEEVNEEEGVVDADSTDGAVLVNGSEGEEEWGTNNKGNPSA 930

[Close]

BLAST of FG531132 vs. TAIR peptide
Match: AT3G15980.3 (| Symbols: | Coatomer, beta' subunit | chr3:5412015-5418313 REVERSE LENGTH=918)

HSP 1 Score: 59.3066 bits (142), Expect = 1.225e-9
Identity = 30/45 (66.67%), Postives = 34/45 (75.56%), Query Frame = 1

Query:    1 EQNGEDGSQEEAVVVDA*STDGAVLVNGSEADEEWGTNNEGALSA 135
            E+  E+   EE  VVDA STDGAVLVNGSE +EEWGTNN+G  SA
Sbjct:  874 EEQQEEEVNEEEGVVDADSTDGAVLVNGSEGEEEWGTNNKGNPSA 918

[Close]

BLAST of FG531132 vs. TAIR peptide
Match: AT3G15980.2 (| Symbols: | Coatomer, beta' subunit | chr3:5412015-5418313 REVERSE LENGTH=918)

HSP 1 Score: 59.3066 bits (142), Expect = 1.225e-9
Identity = 30/45 (66.67%), Postives = 34/45 (75.56%), Query Frame = 1

Query:    1 EQNGEDGSQEEAVVVDA*STDGAVLVNGSEADEEWGTNNEGALSA 135
            E+  E+   EE  VVDA STDGAVLVNGSE +EEWGTNN+G  SA
Sbjct:  874 EEQQEEEVNEEEGVVDADSTDGAVLVNGSEGEEEWGTNNKGNPSA 918

The following BLAST results are available for this feature:

BLAST of FG531132 vs. TrEMBL
BLAST of FG531132 vs. SwissProt
BLAST of FG531132 vs. TAIR peptide

BLAST of FG531132 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 9


Match Name	E-value	Identity	Description
B9SQC0_RICCO	2.311e-13	84.44	Coatomer beta subunit, putative OS=Ricinus communi...	[more]
A9PF13_POPTR	2.311e-13	84.44	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9GEK6_POPTR	1.956e-12	82.22	Predicted protein (Fragment) OS=Populus trichocarp...	[more]
D7U0M1_VITVI	4.079e-10	72.92	Whole genome shotgun sequence of line PN40024, sca...	[more]
A5AWP2_VITVI	4.079e-10	72.92	Putative uncharacterized protein OS=Vitis vinifera...	[more]
D7KJG4_ARALY	1.714e-8	68.89	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
D7L4Z6_ARALY	1.451e-7	66.67	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
C0Z2S5_ARATH	1.451e-7	66.67	AT3G15980 protein OS=Arabidopsis thaliana GN=AT3G1...	[more]
B9DFE3_ARATH	1.451e-7	66.67	AT3G15980 protein OS=Arabidopsis thaliana GN=AT3G1...	[more]

BLAST of FG531132 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 3


Match Name	E-value	Identity	Description
COB22_ARATH	1.264e-9	68.89	Coatomer subunit beta'-2 OS=Arabidopsis thaliana G...	[more]
COB23_ORYSJ	2.019e-7	57.45	Putative coatomer subunit beta'-3 OS=Oryza sativa ...	[more]
COB22_ORYSJ	2.019e-7	62.79	Coatomer subunit beta'-2 OS=Oryza sativa subsp. ja...	[more]

BLAST of FG531132 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 5


Match Name	E-value	Identity	Description
AT1G52360.2	1.447e-10	68.89	\| Symbols: \| Coatomer, beta' subunit \| chr1:19499...	[more]
AT1G52360.1	1.447e-10	68.89	\| Symbols: \| Coatomer, beta' subunit \| chr1:19499...	[more]
AT3G15980.5	1.225e-9	66.67	\| Symbols: \| Coatomer, beta' subunit \| chr3:54120...	[more]
AT3G15980.3	1.225e-9	66.67	\| Symbols: \| Coatomer, beta' subunit \| chr3:54120...	[more]
AT3G15980.2	1.225e-9	66.67	\| Symbols: \| Coatomer, beta' subunit \| chr3:54120...	[more]

InterPro

Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 33..47 score

Properties


Property Name	Value
Singlet in analysis	Pisum sativum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>FG531132 ID=FG531132; Name=FG531132; organism=Pisum sativum; type=EST; length=487bp
GAACAAAATGGAGAGGATGGAAGCCAAGAAGAGGCAGTTGTAGTGGATGC
CTAATCAACAGATGGTGCAGTACTTGTAAACGGCAGCGAGGCTGACGAAG
AGTGGGGTACGAATAATGAAGGAGCCCTGTCAGCCTAAAAGCAAATTGGT
TGGGGTGGTGTGAAAATCAAAATTTTGTCTCTGGTGATTAATTGATTCTG
AAGTGCCATTTCTAACTCCCATTTGACAACTACCTGTTTTTACTTTAACT
ACTTATACCACCTGAGTCCTAACAATTCTAATTGCTTTCTATTTTTAGTA
TATTGGATGTTTACTGCTATTAGGCTGTATGTTTGGGAAGGAGGAAGGAA
ATTTTCAAATGGTGTCCACTGTCGATGATGAATGATTGACTAATTCTCAC
AACTCTATTTTCTCCATGAATTTAGACTGTTTGNNCTTGGGAATTTGTAC
TGTTTTATTAATCGTTGGACCACTCAACTCTATTTTA

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