FG534759

EST Overview
NameFG534759
Unique NameFG534759
TypeEST
OrganismPisum sativum (pea)
Sequence length437
Libraries
Library NameType
LIBEST_023215 MeriZ Pisum sativum Shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Homology
[Close]
BLAST of FG534759 vs. TrEMBL
Match: C6SXZ4_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 6.142e-59
Identity = 110/131 (83.97%), Postives = 125/131 (95.42%), Query Frame = -1 
Query:   39 MVLTEDEITRLYRIRKTVMQMLKDRNYLVGDFELNMSKHDFKNKYGDNMKREDLVINKAKKDKQSDQIYVFFPEEAKVGVKTMKTYTNRMNSENVYRAILVCQTSLTPFARTCVSEMASKFHLEVFQEAEL 431
            MVL+E+EI RLYRIRKTVMQML+DRN+LVGDFE+NMSKH+FK+KYG++MKREDLVINK+KKD   DQIYVFFP+E KVGVKTMKTYTNRMNSENVYRAILV QT+LTPFARTC+SE++SKFHLEVFQEAEL
Sbjct:    1 MVLSEEEIGRLYRIRKTVMQMLRDRNFLVGDFEINMSKHEFKSKYGEHMKREDLVINKSKKDNSGDQIYVFFPDEPKVGVKTMKTYTNRMNSENVYRAILVTQTNLTPFARTCISEISSKFHLEVFQEAEL 131
[Close]
BLAST of FG534759 vs. TrEMBL
Match: C6SVA4_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 6.791e-58
Identity = 108/131 (82.44%), Postives = 124/131 (94.66%), Query Frame = -1 
Query:   39 MVLTEDEITRLYRIRKTVMQMLKDRNYLVGDFELNMSKHDFKNKYGDNMKREDLVINKAKKDKQSDQIYVFFPEEAKVGVKTMKTYTNRMNSENVYRAILVCQTSLTPFARTCVSEMASKFHLEVFQEAEL 431
            MVL+E+E+ RLYRIRKTVMQML+DR +LVGDFE+NMSKH+FK+KYG++MKREDLVINK+KKD   DQIYVFFP+E KVGVKTMKTYTNRMNSENVYRAILV QT+LTPFARTC+SE++SKFHLEVFQEAEL
Sbjct:    1 MVLSEEEMGRLYRIRKTVMQMLRDRGFLVGDFEINMSKHEFKSKYGEHMKREDLVINKSKKDNSGDQIYVFFPDEPKVGVKTMKTYTNRMNSENVYRAILVTQTNLTPFARTCISEISSKFHLEVFQEAEL 131
[Close]
BLAST of FG534759 vs. TrEMBL
Match: B9N7D1_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_828412 PE=4 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 6.578e-53
Identity = 101/131 (77.10%), Postives = 117/131 (89.31%), Query Frame = -1 
Query:   39 MVLTEDEITRLYRIRKTVMQMLKDRNYLVGDFELNMSKHDFKNKYGDNMKREDLVINKAKKDKQSDQIYVFFPEEAKVGVKTMKTYTNRMNSENVYRAILVCQTSLTPFARTCVSEMASKFHLEVFQEAEL 431
            M LTE+EI RL RIRKTVMQMLKDR Y VGDFE+ M++  F++KYG+NMKREDLVINK K++  SDQIYVFFPEEAKVGVKTMKTYTNRM SENV+RAILV Q +LTPFARTC++E+++KFHLEVFQEAEL
Sbjct:    1 MTLTEEEIKRLLRIRKTVMQMLKDRGYFVGDFEIKMTREQFESKYGNNMKREDLVINKTKRNDSSDQIYVFFPEEAKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCINEISTKFHLEVFQEAEL 131
[Close]
BLAST of FG534759 vs. TrEMBL
Match: B9RKM1_RICCO (DNA-directed RNA polymerase II, putative OS=Ricinus communis GN=RCOM_1051580 PE=4 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 5.762e-49
Identity = 101/150 (67.33%), Postives = 116/150 (77.33%), Query Frame = -1 
Query:   39 MVLTEDEITRLYRIRKTVMQMLKDRNYLVGDFELNMSKHDFKNKYGDNMKREDLVINKAKKDKQSD-------------------QIYVFFPEEAKVGVKTMKTYTNRMNSENVYRAILVCQTSLTPFARTCVSEMASKFHLEVFQEAEL 431
            M L+EDEI RL+RIR+TVMQMLKDR YLV D E+N++KH F +KYGDNMKREDLVI+K+K+D                       QIYVFFPEE KVGVKTMKTYTNRM SENV+RAILV Q SLTPFARTC++E+ASKFHLEVFQE+EL
Sbjct:    1 MTLSEDEIKRLFRIRRTVMQMLKDRTYLVTDSEINITKHQFTSKYGDNMKREDLVIHKSKRDGSDSFYPTKLLFLNQLEAWLPLYQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAILVVQQSLTPFARTCIAEIASKFHLEVFQESEL 150
[Close]
BLAST of FG534759 vs. TrEMBL
Match: D7L1N3_ARALY (ATRPABC24.3 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_479745 PE=4 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 9.829e-49
Identity = 94/130 (72.31%), Postives = 111/130 (85.38%), Query Frame = -1 
Query:   39 VLTEDEITRLYRIRKTVMQMLKDRNYLVGDFELNMSKHDFKNKYGDNMKREDLVINKAKKDKQSDQIYVFFPEEAKVGVKTMKTYTNRMNSENVYRAILVCQTSLTPFARTCVSEMASKFHLEVFQEAEL 428
            +LTE+EI RLYRI+KT+MQMLKDR Y + D EL M+K  F  K+GDNMKREDLV  K K++  SDQ+Y+FFP+EAKVGVKTMK YTNRM SENVYRAILV Q +LTPFARTC+SE++SKFHLEVFQEAE+
Sbjct:    1 MLTEEEIKRLYRIQKTLMQMLKDRGYFIADSELTMTKQQFIRKHGDNMKREDLVTLKVKRNDNSDQLYIFFPDEAKVGVKTMKMYTNRMKSENVYRAILVVQQNLTPFARTCISEISSKFHLEVFQEAEM 130
[Close]
BLAST of FG534759 vs. TrEMBL
Match: O81098_ARATH (AT3g22320/MCB17_5 OS=Arabidopsis thaliana GN=AtRPABC24.3 PE=1 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 3.735e-48
Identity = 92/130 (70.77%), Postives = 112/130 (86.15%), Query Frame = -1 
Query:   39 VLTEDEITRLYRIRKTVMQMLKDRNYLVGDFELNMSKHDFKNKYGDNMKREDLVINKAKKDKQSDQIYVFFPEEAKVGVKTMKTYTNRMNSENVYRAILVCQTSLTPFARTCVSEMASKFHLEVFQEAEL 428
            +LTE+E+ RLYRI+KT+MQML+DR Y + D EL M+K  F  K+GDNMKREDLV  KAK++  SDQ+Y+FFP+EAKVGVKTMK YTNRM SENV+RAILV Q +LTPFARTC+SE++SKFHLEVFQEAE+
Sbjct:    1 MLTEEELKRLYRIQKTLMQMLRDRGYFIADSELTMTKQQFIRKHGDNMKREDLVTLKAKRNDNSDQLYIFFPDEAKVGVKTMKMYTNRMKSENVFRAILVVQQNLTPFARTCISEISSKFHLEVFQEAEM 130
[Close]
BLAST of FG534759 vs. TrEMBL
Match: D7TBK0_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_16.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00015349001 PE=4 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 3.865e-45
Identity = 87/111 (78.38%), Postives = 100/111 (90.09%), Query Frame = -1 
Query:   39 MLKDRNYLVGDFELNMSKHDFKNKYGDNMKREDLVINKAKKDKQSDQIYVFFPEEAKVGVKTMKTYTNRMNSENVYRAILVCQTSLTPFARTCVSEMASKFHLEVFQEAEL 371
            MLKDR Y VGDFE+NM+KH F +K+G+NMKREDLVINKAK+   SDQIYVFFPEE KVGVKTMKTYTNRM SENV+RAILV Q +LTPFARTC++E+++KFHLEVFQEAEL
Sbjct:    1 MLKDRGYFVGDFEINMTKHQFVSKFGENMKREDLVINKAKRTDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCINEISTKFHLEVFQEAEL 111
[Close]
BLAST of FG534759 vs. TrEMBL
Match: A9RWG5_PHYPA (Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_206246 PE=4 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 1.469e-44
Identity = 86/127 (67.72%), Postives = 107/127 (84.25%), Query Frame = -1 
Query:   39 EDEITRLYRIRKTVMQMLKDRNYLVGDFELNMSKHDFKNKYGDNMKREDLVINKAKKDKQSDQIYVFFPEEAKVGVKTMKTYTNRMNSENVYRAILVCQTSLTPFARTCVSEMASKFHLEVFQEAEL 419
            +++  RLYRIRKTVM+ML+DR+Y+V D+EL +SK  F+ KYGD  KREDLVI K ++   ++ I+VFFPEEAKVGVKT+KTY +RM +ENV+RAILV Q +LTPFAR CVSEMASK+HLEVFQEAEL
Sbjct:    7 DEQSARLYRIRKTVMEMLRDRDYVVADYELTLSKEQFREKYGDEPKREDLVIQKPRRSNNAEHIFVFFPEEAKVGVKTIKTYVDRMKTENVHRAILVVQQNLTPFARQCVSEMASKYHLEVFQEAEL 133
[Close]
BLAST of FG534759 vs. TrEMBL
Match: A9RKG6_PHYPA (Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_55574 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.918e-44
Identity = 85/127 (66.93%), Postives = 108/127 (85.04%), Query Frame = -1 
Query:   39 EDEITRLYRIRKTVMQMLKDRNYLVGDFELNMSKHDFKNKYGDNMKREDLVINKAKKDKQSDQIYVFFPEEAKVGVKTMKTYTNRMNSENVYRAILVCQTSLTPFARTCVSEMASKFHLEVFQEAEL 419
            +++  RLYRIRKTVM+ML+DR+Y+V +FELN +K +F+ KYGD  KREDLVI K K+   ++ I+VFFPEEAKVGVKT+KTY +RM +ENV+RAILV Q +LTPFAR CVSEM+SK+H+EVFQEAEL
Sbjct:    7 DEQCARLYRIRKTVMEMLRDRDYVVAEFELNSTKEEFREKYGDEPKREDLVIQKPKRSNNAEHIFVFFPEEAKVGVKTIKTYVDRMKTENVHRAILVVQQNLTPFARQCVSEMSSKYHVEVFQEAEL 133
[Close]
BLAST of FG534759 vs. TrEMBL
Match: A9NTD1_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 5.224e-42
Identity = 82/127 (64.57%), Postives = 106/127 (83.46%), Query Frame = -1 
Query:   39 EDEITRLYRIRKTVMQMLKDRNYLVGDFELNMSKHDFKNKYGDNMKREDLVINKAKKDKQSDQIYVFFPEEAKVGVKTMKTYTNRMNSENVYRAILVCQTSLTPFARTCVSEMASKFHLEVFQEAEL 419
            +++  +L+RIR+TV+QML DR+YLVGDFE+N +K  F +K+G++ K+EDLVINKAK++  S+QI+VFFPEEAKVGVK++KTY  RM SE V+RAILV Q +LTPFAR  V E + KFHLEVFQEAEL
Sbjct:    4 DEQTNKLFRIRRTVLQMLNDRDYLVGDFEINTTKEQFLDKFGEDPKKEDLVINKAKRNSPSEQIFVFFPEEAKVGVKSIKTYVERMKSEGVFRAILVVQQALTPFARQSVQEFSGKFHLEVFQEAEL 130
[Close]
BLAST of FG534759 vs. SwissProt
Match: RPAB1_CAEEL (DNA-directed RNA polymerases I, II, and III subunit RPABC1 OS=Caenorhabditis elegans GN=rpb-5 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 2.849e-27
Identity = 64/132 (48.48%), Postives = 85/132 (64.39%), Query Frame = -1 
Query:   39 EDEITRLYRIRKTVMQMLKDRNYLVGDFELNMSKHDFKNKYGDNMK-----REDLVINKAKKDKQSDQIYVFFPEEAKVGVKTMKTYTNRMNSENVYRAILVCQTSLTPFARTCVSEMASKFHLEVFQEAEL 419
            E E  RL+RIRKTV+QM+ DR YLV   EL+     FK +YGD        R DL I  A  D  +DQ++VFFPE+AK+G+KT+K    +M  +N+ RAI+V QT +TP A+  + +MA K+ LE F EAEL
Sbjct:    5 ELETYRLWRIRKTVLQMVHDRGYLVAQDELDQPLETFKVQYGDRPSEKKPARSDLTILVAHNDDPADQMFVFFPEDAKIGIKTIKAICQQMQEQNISRAIIVVQTGMTPSAKQSIGDMAPKYMLEHFLEAEL 136
[Close]
BLAST of FG534759 vs. SwissProt
Match: RPAB1_RAT (DNA-directed RNA polymerases I, II, and III subunit RPABC1 OS=Rattus norvegicus GN=Polr2e PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 1.414e-26
Identity = 60/132 (45.45%), Postives = 86/132 (65.15%), Query Frame = -1 
Query:   39 EDEITRLYRIRKTVMQMLKDRNYLVGDFELNMSKHDFKNKYGDNM-----KREDLVINKAKKDKQSDQIYVFFPEEAKVGVKTMKTYTNRMNSENVYRAILVCQTSLTPFARTCVSEMASKFHLEVFQEAEL 419
            E+E  RL++IRKT+MQ+  DR YLV   EL+ +  +FK ++GD       +R DL +  A  D  +DQ++VFFPEE KVG+KT+K Y  RM  EN+ RA++V Q  +TP A+  + +MA K+ LE F + EL
Sbjct:    4 EEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKAQFGDKPSEGRPRRTDLTVLVAHNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSLVDMAPKYVLEQFLQQEL 135
[Close]
BLAST of FG534759 vs. SwissProt
Match: RPAB1_MOUSE (DNA-directed RNA polymerases I, II, and III subunit RPABC1 OS=Mus musculus GN=Polr2e PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 1.414e-26
Identity = 60/132 (45.45%), Postives = 86/132 (65.15%), Query Frame = -1 
Query:   39 EDEITRLYRIRKTVMQMLKDRNYLVGDFELNMSKHDFKNKYGDNM-----KREDLVINKAKKDKQSDQIYVFFPEEAKVGVKTMKTYTNRMNSENVYRAILVCQTSLTPFARTCVSEMASKFHLEVFQEAEL 419
            E+E  RL++IRKT+MQ+  DR YLV   EL+ +  +FK ++GD       +R DL +  A  D  +DQ++VFFPEE KVG+KT+K Y  RM  EN+ RA++V Q  +TP A+  + +MA K+ LE F + EL
Sbjct:    4 EEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKAQFGDKPSEGRPRRTDLTVLVAHNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSLVDMAPKYVLEQFLQQEL 135
[Close]
BLAST of FG534759 vs. SwissProt
Match: RPAB1_CAEBR (DNA-directed RNA polymerases I, II, and III subunit RPABC1 OS=Caenorhabditis briggsae GN=rpb-5 PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 1.846e-26
Identity = 62/132 (46.97%), Postives = 83/132 (62.88%), Query Frame = -1 
Query:   39 EDEITRLYRIRKTVMQMLKDRNYLVGDFELNMSKHDFKNKYGDNMK-----REDLVINKAKKDKQSDQIYVFFPEEAKVGVKTMKTYTNRMNSENVYRAILVCQTSLTPFARTCVSEMASKFHLEVFQEAEL 419
            E E  RL+RIRKTV+QM+ DR YLV   EL+     FK  +GD        R DL I  A  D  +DQ++VFFPE+ K+G+KT+K    +M  +N+ RAI+V QT +TP A+  + +MA K+ LE F EAEL
Sbjct:    5 ELETYRLWRIRKTVLQMVHDRGYLVAQEELDQPLETFKETFGDRPSEKKPARSDLTILVAHNDDPADQMFVFFPEDTKIGIKTIKAICQQMQEQNISRAIIVVQTGMTPSAKQSIGDMAPKYMLEHFLEAEL 136
[Close]
BLAST of FG534759 vs. SwissProt
Match: RPAB1_PONAB (DNA-directed RNA polymerases I, II, and III subunit RPABC1 OS=Pongo abelii GN=POLR2E PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 3.149e-26
Identity = 59/132 (44.70%), Postives = 86/132 (65.15%), Query Frame = -1 
Query:   39 EDEITRLYRIRKTVMQMLKDRNYLVGDFELNMSKHDFKNKYGDNM-----KREDLVINKAKKDKQSDQIYVFFPEEAKVGVKTMKTYTNRMNSENVYRAILVCQTSLTPFARTCVSEMASKFHLEVFQEAEL 419
            E+E  RL++IRKT+MQ+  DR YLV   EL+ +  +F+ ++GD       +R DL +  A  D  +DQ++VFFPEE KVG+KT+K Y  RM  EN+ RA++V Q  +TP A+  + +MA K+ LE F + EL
Sbjct:    4 EEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFRAQFGDKPSEGRPRRTDLTVLVAHNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSLVDMAPKYILEQFLQQEL 135
[Close]
BLAST of FG534759 vs. SwissProt
Match: RPAB1_HUMAN (DNA-directed RNA polymerases I, II, and III subunit RPABC1 OS=Homo sapiens GN=POLR2E PE=1 SV=4)

HSP 1 Score: 116.316 bits (290), Expect = 5.372e-26
Identity = 60/132 (45.45%), Postives = 85/132 (64.39%), Query Frame = -1 
Query:   39 EDEITRLYRIRKTVMQMLKDRNYLVGDFELNMSKHDFKNKYGDNM-----KREDLVINKAKKDKQSDQIYVFFPEEAKVGVKTMKTYTNRMNSENVYRAILVCQTSLTPFARTCVSEMASKFHLEVFQEAEL 419
            E+E  RL++IRKT+MQ+  DR YLV   EL+ +  +FK + GD       +R DL +  A  D  +DQ++VFFPEE KVG+KT+K Y  RM  EN+ RA++V Q  +TP A+  + +MA K+ LE F + EL
Sbjct:    4 EEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKAQSGDKPSEGRPRRTDLTVLVAHNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSLVDMAPKYILEQFLQQEL 135
[Close]
BLAST of FG534759 vs. SwissProt
Match: RPAB1_BOVIN (DNA-directed RNA polymerases I, II, and III subunit RPABC1 OS=Bos taurus GN=POLR2E PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 5.940e-25
Identity = 58/132 (43.94%), Postives = 84/132 (63.64%), Query Frame = -1 
Query:   39 EDEITRLYRIRKTVMQMLKDRNYLVGDFELNMSKHDFKNKYGDNM-----KREDLVINKAKKDKQSDQIYVFFPEEAKVGVKTMKTYTNRMNSENVYRAILVCQTSLTPFARTCVSEMASKFHLEVFQEAEL 419
            E+E  RL++IRKT+MQ+  DR YLV    L+ +  +FK ++G        +R DL +  A  D  +DQ++VFFPEE KVG+KT+K Y  RM  EN+ RA++V Q  +TP A+  + +MA K+ LE F + EL
Sbjct:    4 EEETYRLWKIRKTIMQLCHDRGYLVTQDGLDQTLEEFKAQFGGKPSEGRPRRTDLTVLVAHNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSLVDMAPKYILEQFLQQEL 135
[Close]
BLAST of FG534759 vs. SwissProt
Match: RPAB1_DICDI (DNA-directed RNA polymerases I, II, and III subunit rpabc1 OS=Dictyostelium discoideum GN=polr2e PE=3 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 1.514e-20
Identity = 54/128 (42.19%), Postives = 76/128 (59.38%), Query Frame = -1 
Query:   39 DEITRLYRIRKTVMQMLKDRNYLVGDFELNMSKHDFKNKYGDNMKREDLVINKAKKDKQSDQIYVFFPEEAKVGVKTMKTYTNRMNSENVYRAILVCQTSLTPFARTCVSEMA--SKFHLEVFQEAEL 416
            ++I RL +IRKTV+QML DR Y++  +E    +  F       + RE+L +   KKD  +D IYVFFP+  KVGV  +K Y + M      RAI+V Q ++TPFA+  ++E +   K  LE F EAEL
Sbjct:    2 EDINRLLQIRKTVLQMLSDREYIITAYEQEYPRESF-------VSRENLTMYCVKKDDPTDSIYVFFPDTPKVGVTQIKKYVDIMKDRQANRAIIVVQQNITPFAKQALAEFSQEKKITLEQFNEAEL 122
[Close]
BLAST of FG534759 vs. SwissProt
Match: RPAB1_SCHPO (DNA-directed RNA polymerases I, II, and III subunit RPABC1 OS=Schizosaccharomyces pombe GN=rpb5 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 8.046e-14
Identity = 44/135 (32.59%), Postives = 69/135 (51.11%), Query Frame = -1 
Query:   39 MVLTEDEITRLYRIRKTVMQMLKDRNYLVGDFELNMSKHDFKNKY---GDNMKREDLVIN-KAKKDKQSDQIYVFFPEEAKVGVKTMKTYTNRMNSENVYRAILVCQTSLTPFARTCVSEMASKFHLEVFQEAEL 431
            M   E  I R++R  KT  Q++ DR Y V   EL+++   FK  +   G N+ R  L    K   D     IY+ F +E  VG+K M+T+ + +   N    IL+   S+TP A   ++ +  +F +E FQE++L
Sbjct:    1 MSAEEKNIVRVFRAWKTAHQLVHDRGYGVSQAELDLTLDQFKAMHCGMGRNLDRTTLSFYAKPSNDSNKGTIYIEFAKEPSVGIKEMRTFVHTLGDHNHKTGILIYANSMTPSAAKIIATVTGQFTIETFQESDL 135
[Close]
BLAST of FG534759 vs. SwissProt
Match: RPAB1_KLULA (DNA-directed RNA polymerases I, II, and III subunit RPABC1 OS=Kluyveromyces lactis GN=RPB5 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.993e-13
Identity = 45/136 (33.09%), Postives = 71/136 (52.21%), Query Frame = -1 
Query:   39 EDEITRLYRIRKTVMQMLKDRNYLVGDFELNMSKHDFKNKYGDNMKREDLVI---------NKAKKDKQSDQIYVFFPEEAKVGVKTMKTYTNRMNSENVYRAILVCQTSLTPFARTCVSEMASKFHLEVFQEAEL 419
            E  I+RL+R  KTV +M++DR Y +   E+++S  DFK KY D+M +    +            +K  +   ++V F +EA VGVKTMK +   +  +N    I + Q+ +TP A   +   A+   +E F EA L
Sbjct:    6 ERNISRLWRAFKTVKEMVRDRGYFITQEEIDLSLEDFKAKYCDSMGKPQRKMMSFQSNPTEESIEKFPEMGSLWVEFCDEASVGVKTMKNFVVHITEKNFQTGIFIYQSGITPSANK-ILPTAAPAVIETFPEASL 140
[Close]
BLAST of FG534759 vs. TAIR peptide
Match: AT3G22320.1 (| Symbols: ATRPABC24.3, RPB5A, NRPB5, NRPD5 | Eukaryotic rpb5 RNA polymerase subunit family protein | chr3:7891045-7892094 REVERSE LENGTH=205)

HSP 1 Score: 194.126 bits (492), Expect = 2.466e-50
Identity = 92/130 (70.77%), Postives = 112/130 (86.15%), Query Frame = -1 
Query:   39 VLTEDEITRLYRIRKTVMQMLKDRNYLVGDFELNMSKHDFKNKYGDNMKREDLVINKAKKDKQSDQIYVFFPEEAKVGVKTMKTYTNRMNSENVYRAILVCQTSLTPFARTCVSEMASKFHLEVFQEAEL 428
            +LTE+E+ RLYRI+KT+MQML+DR Y + D EL M+K  F  K+GDNMKREDLV  KAK++  SDQ+Y+FFP+EAKVGVKTMK YTNRM SENV+RAILV Q +LTPFARTC+SE++SKFHLEVFQEAE+
Sbjct:    1 MLTEEELKRLYRIQKTLMQMLRDRGYFIADSELTMTKQQFIRKHGDNMKREDLVTLKAKRNDNSDQLYIFFPDEAKVGVKTMKMYTNRMKSENVFRAILVVQQNLTPFARTCISEISSKFHLEVFQEAEM 130
[Close]
BLAST of FG534759 vs. TAIR peptide
Match: AT5G57980.1 (| Symbols: RPB5C | RNA polymerase II fifth largest subunit, C | chr5:23469050-23469768 REVERSE LENGTH=210)

HSP 1 Score: 98.9821 bits (245), Expect = 1.079e-21
Identity = 51/131 (38.93%), Postives = 83/131 (63.36%), Query Frame = -1 
Query:   39 EDEITRLYRIRKTVMQMLKDRNYLVGDFELNMSKHDFKNKYGDNM---KREDLVINKAKKDKQSDQIYVFFPEEAKVGVKTM-KTYTNRMNSENVYRAILVCQTSLTPFARTCVSEMASKFHLEVFQEAEL 419
            +DEITR++++R+TV+QML+DR Y + + +LN+ + +F  ++   M    +E L ++  K    +D+IYVF+PE  KVGV  + K    +M  + V+R I+V   ++T  AR  VSE+     +EVF+EAEL
Sbjct:    5 DDEITRIFKVRRTVLQMLRDRGYTIEESDLNLKREEFVQRFCKTMNKVNKEALFVSANKGPNPADKIYVFYPEGPKVGVPVIKKEVAIKMRDDKVHRGIVVVPMAITAPARMAVSELNKMLTIEVFEEAEL 135
[Close]
BLAST of FG534759 vs. TAIR peptide
Match: AT3G57080.1 (| Symbols: RPB5B, NRPE5 | Eukaryotic rpb5 RNA polymerase subunit family protein | chr3:21125878-21127470 FORWARD LENGTH=222)

HSP 1 Score: 60.077 bits (144), Expect = 5.557e-10
Identity = 37/130 (28.46%), Postives = 68/130 (52.31%), Query Frame = -1 
Query:   39 LTEDEITRLYRIRKTVMQMLKDRNYLVGDFELNMSKHDFKNKYGDNMKREDLVINKAKKDKQSDQIYVFFPEEAKVGVKTMKT-YTNRMNSENVYRAILVCQTSLTPFARTCVSEMASKFHLEVFQEAEL 425
            L+ +E  R Y  R+  +QML+DR Y V D ++N+S HDF+  YG+    + L I+   +   + ++ + F   + V V  +++   + ++ E +   ILV Q  +T  A   +   +  F +E+FQ  +L
Sbjct:   20 LSSEESHRYYLARRNGLQMLRDRGYEVSDEDINLSLHDFRTVYGERPDVDRLRISALHRSDSTKKVKIVFFGTSMVKVNAIRSVVADILSQETITGLILVLQNHVTNQALKAIELFS--FKVEIFQITDL 147
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BLAST of FG534759 vs. TAIR peptide
Match: AT2G41340.1 (| Symbols: RPB5D | RNA polymerase II fifth largest subunit, D | chr2:17229026-17230442 FORWARD LENGTH=218)

HSP 1 Score: 55.0694 bits (131), Expect = 1.788e-8
Identity = 39/126 (30.95%), Postives = 65/126 (51.59%), Query Frame = -1 
Query:   39 EITRLYRIRKTVMQMLKDRNYLVGDFELNMSKHDFKNKYGDNMKREDLVINKAKKDKQSDQIYVFFPEEAKVGVKTMKTY-TNRMNSENVYRAILVCQTSLTPFARTCVSEMASKFHLEVFQEAEL 413
            E  + Y  R+T M+ML+DR Y V D ++N+S   F+  YG++   + L I+   +   S +I V F     V V  M+    + ++ EN+   ILV Q+ +T  A   V   +  F +E+F+  +L
Sbjct:   20 ECHKYYLARRTTMEMLRDRGYDVSDEDINLSLQQFRALYGEHPDVDLLRISAKHRFDSSKKISVVFCGTGIVKVNAMRVIAADVLSRENITGLILVLQSHITNQALKAVELFS--FKVELFEITDL 143
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BLAST of FG534759 vs. TAIR peptide
Match: AT3G54490.1 (| Symbols: RPB5E | RNA polymerase II fifth largest subunit, E | chr3:20173673-20175297 FORWARD LENGTH=233)

HSP 1 Score: 51.2174 bits (121), Expect = 2.581e-7
Identity = 37/133 (27.82%), Postives = 66/133 (49.62%), Query Frame = -1 
Query:   39 TED----EITRLYRIRKTVMQMLKDRNYLVGDFELNMSKHDFKNKYGDNMKREDLVINKAKKDKQSDQIYVFFPEEAKVGVKTMKT-YTNRMNSENVYRAILVCQTSLTPFARTCVSEMASKFHLEVFQEAEL 422
            TED    E  R Y  R T  +ML+DR Y V + EL+++  +F++ +G+  + E L I    +     +I V F     + VK+++  +    N+  ++  ILV Q+ +  FA+  ++     F +E F   +L
Sbjct:   28 TEDTGGIESKRFYLARTTAFEMLRDRGYEVNEAELSLTLSEFRSVFGEKPELERLRICVPLRSDPKKKILVVFMGTEPITVKSVRALHIQISNNVGLHAMILVLQSKMNHFAQKALTTF--PFTVETFPIEDL 158
The following BLAST results are available for this feature:
BLAST of FG534759 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
C6SXZ4_SOYBN6.142e-5983.97Putative uncharacterized protein OS=Glycine max PE... [more]
C6SVA4_SOYBN6.791e-5882.44Putative uncharacterized protein OS=Glycine max PE... [more]
B9N7D1_POPTR6.578e-5377.10Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9RKM1_RICCO5.762e-4967.33DNA-directed RNA polymerase II, putative OS=Ricinu... [more]
D7L1N3_ARALY9.829e-4972.31ATRPABC24.3 OS=Arabidopsis lyrata subsp. lyrata GN... [more]
O81098_ARATH3.735e-4870.77AT3g22320/MCB17_5 OS=Arabidopsis thaliana GN=AtRPA... [more]
D7TBK0_VITVI3.865e-4578.38Whole genome shotgun sequence of line PN40024, sca... [more]
A9RWG5_PHYPA1.469e-4467.72Predicted protein OS=Physcomitrella patens subsp. ... [more]
A9RKG6_PHYPA1.918e-4466.93Predicted protein OS=Physcomitrella patens subsp. ... [more]
A9NTD1_PICSI5.224e-4264.57Putative uncharacterized protein OS=Picea sitchens... [more]
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BLAST of FG534759 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
RPAB1_CAEEL2.849e-2748.48DNA-directed RNA polymerases I, II, and III subuni... [more]
RPAB1_RAT1.414e-2645.45DNA-directed RNA polymerases I, II, and III subuni... [more]
RPAB1_MOUSE1.414e-2645.45DNA-directed RNA polymerases I, II, and III subuni... [more]
RPAB1_CAEBR1.846e-2646.97DNA-directed RNA polymerases I, II, and III subuni... [more]
RPAB1_PONAB3.149e-2644.70DNA-directed RNA polymerases I, II, and III subuni... [more]
RPAB1_HUMAN5.372e-2645.45DNA-directed RNA polymerases I, II, and III subuni... [more]
RPAB1_BOVIN5.940e-2543.94DNA-directed RNA polymerases I, II, and III subuni... [more]
RPAB1_DICDI1.514e-2042.19DNA-directed RNA polymerases I, II, and III subuni... [more]
RPAB1_SCHPO8.046e-1432.59DNA-directed RNA polymerases I, II, and III subuni... [more]
RPAB1_KLULA3.993e-1333.09DNA-directed RNA polymerases I, II, and III subuni... [more]
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BLAST of FG534759 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 5
Match NameE-valueIdentityDescription
AT3G22320.12.466e-5070.77| Symbols: ATRPABC24.3, RPB5A, NRPB5, NRPD5 | Euka... [more]
AT5G57980.11.079e-2138.93| Symbols: RPB5C | RNA polymerase II fifth largest... [more]
AT3G57080.15.557e-1028.46| Symbols: RPB5B, NRPE5 | Eukaryotic rpb5 RNA poly... [more]
AT2G41340.11.788e-830.95| Symbols: RPB5D | RNA polymerase II fifth largest... [more]
AT3G54490.12.581e-727.82| Symbols: RPB5E | RNA polymerase II fifth largest... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 14..25
score
NoneNo IPR availablePANTHERPTHR10535DNA-DIRECTED RNA POLYMERASE IIcoord: 5..133
score: 3
IPR005571RNA polymerase, Rpb5, N-terminalGENE3D3.40.1340.10no descriptioncoord: 6..133
score: 5.2
IPR005571RNA polymerase, Rpb5, N-terminalPFAMPF03871RNA_pol_Rpb5_Ncoord: 7..92
score: 2.8
IPR005571RNA polymerase, Rpb5, N-terminalSUPERFAMILY53036Eukaryotic RPB5 N-terminal domaincoord: 6..133
score: 3.5

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FG534759 ID=FG534759; Name=FG534759; organism=Pisum sativum; type=EST; length=437bp
TTGTCGACCATAAACACAGCCAACTGGCCGTCGTTTTACAATTCCGCCTC
CTGAAAAACTTCCAAGTGGAATTTGGAAGCCATTTCAGAGACACATGTTC
GTGCAAATGGAGTGAGACTAGTCTGACAAACAAGGATCGCTCTGTAAACA
TTCTCAGAATTCATCCGATTGGTGTAAGTCTTCATAGTCTTGACGCCGAC
CTTAGCTTCCTCAGGGAAGAAGACGTAGATCTGATCGGACTGTTTATCTT
TTTTGGCTTTGTTAATAACGAGATCTTCTCTCTTCATATTATCGCCATAT
TTATTCTTGAAATCGTGTTTCGACATGTTAAGCTCAAAGTCTCCGACGAG
ATAATTCCGATCTTTAAGCATTTGCATCACTGTTTTACGGATCCTATATA
GTCTCGTTATCTCATCCTCTGTGAGTACCATTGTCGC
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003899DNA-directed 5'-3' RNA polymerase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006350transcription
Vocabulary: INTERPRO
TermDefinition
IPR005571RNA_pol_Rpb5_N