FG535316

EST Overview


Name	FG535316
Unique Name	FG535316
Type	EST
Organism	Pisum sativum (pea)
Sequence length	412

Libraries


Library Name	Type
LIBEST_023215 MeriZ Pisum sativum Shoot apical meristem ESTs	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Pisum sativum unigene v2	Pisum sativum unigene v2	EST
Pisum sativum unigene v1	Pisum sativum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Pisum sativum unigene v1	2010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl	2010-12-28
Pisum sativum unigene v2	2011-03-01
Homology Analysis: Pisum sativum unigene v2 vs Trembl	2011-04-27
Homology Analysis: Pisum sativum unigene v2 vs Soybean peptides	2011-04-21
Homology Analysis: Pisum sativum unigene v2 vs Medicago proteins	2011-04-21
InterProScan analysis for Pisum sativum unigene v2	2011-04-27
InterProScan analysis for Pisum sativum unigene v1	2010-12-29

Homology

[Close]

BLAST of FG535316 vs. TrEMBL
Match: D7SNF6_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_61.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00031541001 PE=4 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 6.491e-16
Identity = 46/73 (63.01%), Postives = 57/73 (78.08%), Query Frame = 3

Query:    6 KLSELKMLQKVHDEKSSKIEELKKQIELTKQRLE--KKEMTGDRMGSFNALSNKYNSLRDEYNAMLAEKSRES 218
            K SEL+MLQK H+EK+ KI+ELK+QIE  K RLE  KKE+  ++M +F  LS KYNSLRDEYNA+LAEK  E+
Sbjct:   14 KASELEMLQKQHEEKTMKIQELKRQIESVKLRLEKRKKEIPEEKMEAFKVLSEKYNSLRDEYNALLAEKLGEN 86

[Close]

BLAST of FG535316 vs. TrEMBL
Match: A5AYL5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027078 PE=4 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.107e-15
Identity = 45/69 (65.22%), Postives = 55/69 (79.71%), Query Frame = 3

Query:    6 KLSELKMLQKVHDEKSSKIEELKKQIELTKQRLE--KKEMTGDRMGSFNALSNKYNSLRDEYNAMLAEK 206
            K SEL+MLQK H+EK+ KI+ELK+QIE  K RLE  KKE+  ++M +F  LS KYNSLRDEYNA+LAEK
Sbjct:   14 KASELEMLQKQHEEKTMKIQELKRQIESVKLRLEKRKKEIPEEKMEAFKVLSEKYNSLRDEYNALLAEK 82

[Close]

BLAST of FG535316 vs. TrEMBL
Match: B9HNZ7_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_557880 PE=4 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 4.651e-14
Identity = 43/70 (61.43%), Postives = 54/70 (77.14%), Query Frame = 3

Query:   12 SELKMLQKVHDEKSSKIEELKKQIELTKQRLEKKEM--TGDRMGSFNALSNKYNSLRDEYNAMLAEKSRE 215
            SEL+ LQ+ H+EK+ KIEELK QI+  K  LEKK    +GD+   F +LS+KYNSLR+EYNA+LAEKSRE
Sbjct:   21 SELQALQRQHEEKTRKIEELKSQIDSVKLDLEKKMKGPSGDKKEVFKSLSDKYNSLREEYNALLAEKSRE 90

[Close]

BLAST of FG535316 vs. TrEMBL
Match: B9RIF8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1578740 PE=4 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.309e-13
Identity = 41/72 (56.94%), Postives = 56/72 (77.78%), Query Frame = 3

Query:    6 KLSELKMLQKVHDEKSSKIEELKKQIELTKQRLEKK--EMTGDRMGSFNALSNKYNSLRDEYNAMLAEKSRE 215
            K+ EL+ LQK H+EK+ KI++LK QIE  K  LEKK  E++ ++M +F  LS KYN+LRDEYNA+LAEK+R+
Sbjct:   15 KILELETLQKQHEEKTRKIQKLKGQIESVKLHLEKKRKEVSEEKMENFKILSVKYNNLRDEYNALLAEKTRK 86

[Close]

BLAST of FG535316 vs. TrEMBL
Match: B9GI29_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_641025 PE=4 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 3.450e-9
Identity = 38/70 (54.29%), Postives = 48/70 (68.57%), Query Frame = 3

Query:   12 SELKMLQKVHDEKSSKIEELKKQIELTKQRLEK--KEMTGDRMGSFNALSNKYNSLRDEYNAMLAEKSRE 215
            S L+ LQK H+EK+ K+EELK QI   K  LEK  K+   D+   F +LS+KYNSLR+EYN  LAE+S E
Sbjct:   18 SGLEALQKQHEEKTRKVEELKSQIVSVKLDLEKKRKDALEDKKEVFKSLSDKYNSLREEYNT-LAERSSE 86

[Close]

BLAST of FG535316 vs. TrEMBL
Match: D7SNF6_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_61.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00031541001 PE=4 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 8.116e-16
Identity = 46/73 (63.01%), Postives = 57/73 (78.08%), Query Frame = 3

Query:    6 KLSELKMLQKVHDEKSSKIEELKKQIELTKQRLE--KKEMTGDRMGSFNALSNKYNSLRDEYNAMLAEKSRES 218
            K SEL+MLQK H+EK+ KI+ELK+QIE  K RLE  KKE+  ++M +F  LS KYNSLRDEYNA+LAEK  E+
Sbjct:   14 KASELEMLQKQHEEKTMKIQELKRQIESVKLRLEKRKKEIPEEKMEAFKVLSEKYNSLRDEYNALLAEKLGEN 86

[Close]

BLAST of FG535316 vs. TrEMBL
Match: A5AYL5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027078 PE=4 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.384e-15
Identity = 45/69 (65.22%), Postives = 55/69 (79.71%), Query Frame = 3

Query:    6 KLSELKMLQKVHDEKSSKIEELKKQIELTKQRLE--KKEMTGDRMGSFNALSNKYNSLRDEYNAMLAEK 206
            K SEL+MLQK H+EK+ KI+ELK+QIE  K RLE  KKE+  ++M +F  LS KYNSLRDEYNA+LAEK
Sbjct:   14 KASELEMLQKQHEEKTMKIQELKRQIESVKLRLEKRKKEIPEEKMEAFKVLSEKYNSLRDEYNALLAEK 82

[Close]

BLAST of FG535316 vs. TrEMBL
Match: B9HNZ7_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_557880 PE=4 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 5.817e-14
Identity = 43/70 (61.43%), Postives = 54/70 (77.14%), Query Frame = 3

Query:   12 SELKMLQKVHDEKSSKIEELKKQIELTKQRLEKKEM--TGDRMGSFNALSNKYNSLRDEYNAMLAEKSRE 215
            SEL+ LQ+ H+EK+ KIEELK QI+  K  LEKK    +GD+   F +LS+KYNSLR+EYNA+LAEKSRE
Sbjct:   21 SELQALQRQHEEKTRKIEELKSQIDSVKLDLEKKMKGPSGDKKEVFKSLSDKYNSLREEYNALLAEKSRE 90

[Close]

BLAST of FG535316 vs. TrEMBL
Match: B9RIF8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1578740 PE=4 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.887e-13
Identity = 41/72 (56.94%), Postives = 56/72 (77.78%), Query Frame = 3

Query:    6 KLSELKMLQKVHDEKSSKIEELKKQIELTKQRLEKK--EMTGDRMGSFNALSNKYNSLRDEYNAMLAEKSRE 215
            K+ EL+ LQK H+EK+ KI++LK QIE  K  LEKK  E++ ++M +F  LS KYN+LRDEYNA+LAEK+R+
Sbjct:   15 KILELETLQKQHEEKTRKIQKLKGQIESVKLHLEKKRKEVSEEKMENFKILSVKYNNLRDEYNALLAEKTRK 86

[Close]

BLAST of FG535316 vs. TrEMBL
Match: B9GI29_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_641025 PE=4 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 4.314e-9
Identity = 38/70 (54.29%), Postives = 48/70 (68.57%), Query Frame = 3

Query:   12 SELKMLQKVHDEKSSKIEELKKQIELTKQRLEK--KEMTGDRMGSFNALSNKYNSLRDEYNAMLAEKSRE 215
            S L+ LQK H+EK+ K+EELK QI   K  LEK  K+   D+   F +LS+KYNSLR+EYN  LAE+S E
Sbjct:   18 SGLEALQKQHEEKTRKVEELKSQIVSVKLDLEKKRKDALEDKKEVFKSLSDKYNSLREEYNT-LAERSSE 86

[Close]

BLAST of FG535316 vs. Soybean peptides
Match: Glyma12g02400.1|PACid:16286110 ()

HSP 1 Score: 99.3673 bits (246), Expect = 1.051e-21
Identity = 51/71 (71.83%), Postives = 61/71 (85.92%), Query Frame = 3

Query:   12 SELKMLQKVHDEKSSKIEELKKQIELTKQRLEKK--EMTGDRMGSFNALSNKYNSLRDEYNAMLAEKSRES 218
            SEL+ LQ+ H+EK+ KI+ELK+QIELTK RLEKK  E+T ++MG FN LSNKYNSLR+EYNAMLAEK RES
Sbjct:   19 SELEALQREHEEKNLKIQELKRQIELTKNRLEKKKKEVTEEQMGGFNTLSNKYNSLREEYNAMLAEKLRES 89

[Close]

BLAST of FG535316 vs. Soybean peptides
Match: Glyma11g10050.1|PACid:16283322 ()

HSP 1 Score: 69.3218 bits (168), Expect = 1.165e-12
Identity = 37/59 (62.71%), Postives = 48/59 (81.36%), Query Frame = 3

Query:   12 SELKMLQKVHDEKSSKIEELKKQIELTKQRLE--KKEMTGDRMGSFNALSNKYNSLRDE 182
            SEL+ LQ+ H+EK+ KI+ELK+QIELTK RLE  KKE+T ++MG FN +S KYNSL +E
Sbjct:   16 SELEALQREHEEKNMKIKELKRQIELTKNRLEKKKKEVTEEQMGGFN-ISKKYNSLTEE 73

[Close]

BLAST of FG535316 vs. Medicago proteins
Match: IMGA|Medtr2g102090.1 (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic (AHRD V1 ***- Q9BBP3); contains Interpro domain(s) IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase chr02_pseudomolecule_IMGAG_V3.5 32857504-32860729 E EGN_Mt100125 20100825)

HSP 1 Score: 113.62 bits (283), Expect = 3.212e-26
Identity = 58/72 (80.56%), Postives = 64/72 (88.89%), Query Frame = 3

Query:    3 PKLSELKMLQKVHDEKSSKIEELKKQIELTKQRLEKKEMTGDRMGSFNALSNKYNSLRDEYNAMLAEKSRES 218
            PKLSELKMLQK HDEK S+I ELK+QIE TKQRLEKKE T D+MGSFNALS KYNS+R+EYNA+LAEKSR S
Sbjct:   36 PKLSELKMLQKEHDEKLSRIAELKRQIESTKQRLEKKEGTRDKMGSFNALSEKYNSVREEYNAILAEKSRGS 107

[Close]

BLAST of FG535316 vs. Medicago proteins
Match: IMGA|Medtr4g076590.1 (Unknown Protein (AHRD V1) chr04_pseudomolecule_IMGAG_V3.5 24758288-24757160 E EGN_Mt100125 20100825)

HSP 1 Score: 109.383 bits (272), Expect = 6.057e-25
Identity = 57/72 (79.17%), Postives = 61/72 (84.72%), Query Frame = 3

Query:    3 PKLSELKMLQKVHDEKSSKIEELKKQIELTKQRLEKKEMTGDRMGSFNALSNKYNSLRDEYNAMLAEKSRES 218
            PKLSEL+ LQK HDEKSSKI+ELKKQIE TK RLE KE  GD+MGSFNALS KY SLR+EYNAMLAEKS  S
Sbjct:   20 PKLSELEGLQKEHDEKSSKIQELKKQIESTKHRLENKEKKGDKMGSFNALSKKYISLREEYNAMLAEKSMGS 91

The following BLAST results are available for this feature:

BLAST of FG535316 vs. TrEMBL
BLAST of FG535316 vs. TrEMBL
BLAST of FG535316 vs. Soybean peptides
BLAST of FG535316 vs. Medicago proteins

BLAST of FG535316 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 5


Match Name	E-value	Identity	Description
D7SNF6_VITVI	6.491e-16	63.01	Whole genome shotgun sequence of line PN40024, sca...	[more]
A5AYL5_VITVI	1.107e-15	65.22	Putative uncharacterized protein OS=Vitis vinifera...	[more]
B9HNZ7_POPTR	4.651e-14	61.43	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9RIF8_RICCO	2.309e-13	56.94	Putative uncharacterized protein OS=Ricinus commun...	[more]
B9GI29_POPTR	3.450e-9	54.29	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]

BLAST of FG535316 vs. TrEMBL
Analysis Date: 2011-04-27 (Homology Analysis: Pisum sativum unigene v2 vs Trembl)
Total hits: 5


Match Name	E-value	Identity	Description
D7SNF6_VITVI	8.116e-16	63.01	Whole genome shotgun sequence of line PN40024, sca...	[more]
A5AYL5_VITVI	1.384e-15	65.22	Putative uncharacterized protein OS=Vitis vinifera...	[more]
B9HNZ7_POPTR	5.817e-14	61.43	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9RIF8_RICCO	2.887e-13	56.94	Putative uncharacterized protein OS=Ricinus commun...	[more]
B9GI29_POPTR	4.314e-9	54.29	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]

BLAST of FG535316 vs. Soybean peptides
Analysis Date: 2011-04-21 (Homology Analysis: Pisum sativum unigene v2 vs Soybean peptides)
Total hits: 2


Match Name	E-value	Identity	Description
Glyma12g02400.1\|PACid:16286110	1.051e-21	71.83		[more]
Glyma11g10050.1\|PACid:16283322	1.165e-12	62.71		[more]

BLAST of FG535316 vs. Medicago proteins
Analysis Date: 2011-04-21 (Homology Analysis: Pisum sativum unigene v2 vs Medicago proteins)
Total hits: 2


Match Name	E-value	Identity	Description
IMGA\|Medtr2g102090.1	3.212e-26	80.56	NAD(P)H-quinone oxidoreductase chain 4, chloroplas...	[more]
IMGA\|Medtr4g076590.1	6.057e-25	79.17	Unknown Protein (AHRD V1) chr04_pseudomolecule_IMG...	[more]

InterPro

Analysis Name: InterProScan analysis for Pisum sativum unigene v2
Date Performed: 2011-04-27


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 7..33 score

Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 7..33 score

Properties


Property Name	Value
Singlet in analysis	Pisum sativum unigene v2
Singlet in analysis	Pisum sativum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>FG535316 ID=FG535316; Name=FG535316; organism=Pisum sativum; type=EST; length=412bp
GGCCAAAGTTGTCGGAGTTGAAAATGTTGCAAAAAGTGCATGATGAAAAA
AGCTCAAAAATTGAAGAGTTGAAGAAACAGATTGAGTTAACAAAGCAGCG
GTTAGAAAAGAAAGAGATGACAGGAGATAGAATGGGAAGTTTCAATGCCT
TAAGCAACAAGTATAACAGTTTGAGGGATGAATACAATGCTATGCTAGCT
GAAAAATCAAGAGAATCAAATTAGTTTTATCTCTAAACTTATTATATTAG
CCTCAACATTTAGTTTTAATTGTTACTCTCTCCAATCTCATATATAAATA
AATATTTTAATTTCTGATTTATTCAATAAGATAGTCTGGTTTAAATTAGA
TAAATTAGATAAATCTAAACAATAAATATTTATTTATGTATGTGAGTGAG
ATTATAAAGAGT

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