FG535635

EST Overview
NameFG535635
Unique NameFG535635
TypeEST
OrganismPisum sativum (pea)
Sequence length496
Libraries
Library NameType
LIBEST_023215 MeriZ Pisum sativum Shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
Homology
BLAST of FG535635 vs. TrEMBL
Match: B7FLH0_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 5.085e-21
Identity = 52/59 (88.14%), Postives = 55/59 (93.22%), Query Frame = 3
Query:    3 NIILPKRTVSSNEDYFSSHSMNQTVRIVRDKLDKIESSGGHLEAGSTSKKARVDNRRRI 179
            N  LPKRTVSSNEDYFSSHSMNQTVR+VR KLDKI+SSG HL+AGSTSKKARVDNRRRI
Sbjct:  164 NSNLPKRTVSSNEDYFSSHSMNQTVRVVRAKLDKIQSSGEHLQAGSTSKKARVDNRRRI 222          
BLAST of FG535635 vs. TrEMBL
Match: D7TDI3_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_127.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00013774001 PE=4 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 3.529e-14
Identity = 40/52 (76.92%), Postives = 44/52 (84.62%), Query Frame = 3
Query:   24 TVSSNEDYFSSHSMNQTVRIVRDKLDKIESSGGHLEAGSTSKKARVDNRRRI 179
            TVSSN+DYF S SMNQTVR+VR+KLDKI+SS  HLEAG   KK RVDNRRRI
Sbjct:  179 TVSSNQDYFGSPSMNQTVRLVREKLDKIQSSSQHLEAGPAFKKTRVDNRRRI 230          
BLAST of FG535635 vs. TrEMBL
Match: A5BWV4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_032503 PE=4 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 3.529e-14
Identity = 40/52 (76.92%), Postives = 44/52 (84.62%), Query Frame = 3
Query:   24 TVSSNEDYFSSHSMNQTVRIVRDKLDKIESSGGHLEAGSTSKKARVDNRRRI 179
            TVSSN+DYF S SMNQTVR+VR+KLDKI+SS  HLEAG   KK RVDNRRRI
Sbjct:  179 TVSSNQDYFGSPSMNQTVRLVREKLDKIQSSSQHLEAGPAFKKTRVDNRRRI 230          
BLAST of FG535635 vs. TrEMBL
Match: B9HPX6_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_803974 PE=4 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.341e-13
Identity = 39/55 (70.91%), Postives = 46/55 (83.64%), Query Frame = 3
Query:   15 PKRTVSSNEDYFSSHSMNQTVRIVRDKLDKIESSGGHLEAGSTSKKARVDNRRRI 179
            P   VSS++DYF S SMNQTVR+VR+KL+KI+SS  HL+AG  SKKARVDNRRRI
Sbjct:  180 PITRVSSDQDYFPSQSMNQTVRLVREKLNKIQSSSEHLQAGPVSKKARVDNRRRI 234          
BLAST of FG535635 vs. TrEMBL
Match: C6T5J6_SOYBN (Putative uncharacterized protein (Fragment) OS=Glycine max PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 3.303e-12
Identity = 37/50 (74.00%), Postives = 43/50 (86.00%), Query Frame = 3
Query:   15 PKRTVSSNEDYFSSHSMNQTVRIVRDKLDKIESSGGHLEAGSTSKKARVD 164
            P R VSSNEDYF+S+SMNQTV +VRDKLDKI+SSG + +AGS SKK RVD
Sbjct:  167 PIRMVSSNEDYFASNSMNQTVSLVRDKLDKIQSSGENTKAGSASKKQRVD 216          
BLAST of FG535635 vs. TrEMBL
Match: B9SH88_RICCO (Nucleic acid binding protein, putative OS=Ricinus communis GN=RCOM_0527840 PE=4 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.255e-11
Identity = 36/55 (65.45%), Postives = 44/55 (80.00%), Query Frame = 3
Query:   15 PKRTVSSNEDYFSSHSMNQTVRIVRDKLDKIESSGGHLEAGSTSKKARVDNRRRI 179
            P   VSSN++YF S SMNQTV +VR+KL+KI+SS  HL+A   SKK+RVDNRRRI
Sbjct:  162 PITRVSSNQEYFPSQSMNQTVSLVREKLNKIQSSSEHLQAVPASKKSRVDNRRRI 216          
BLAST of FG535635 vs. TrEMBL
Match: Q6YPG3_ORYSJ (Os02g0105000 protein OS=Oryza sativa subsp. japonica GN=OJA1212_C06.21-1 PE=2 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 1.299e-8
Identity = 32/51 (62.75%), Postives = 37/51 (72.55%), Query Frame = 3
Query:   27 VSSNEDYFSSHSMNQTVRIVRDKLDKIESSGGHLEAGSTSKKARVDNRRRI 179
            VSSN+DYF S SMN TV +VR+KLDKI+SS  +  A    KK R DNRRRI
Sbjct:  170 VSSNKDYFPSESMNATVNLVREKLDKIQSSSDNSSAIVAPKKPRTDNRRRI 220          
BLAST of FG535635 vs. TrEMBL
Match: B8AGW5_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_05486 PE=4 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 1.299e-8
Identity = 32/51 (62.75%), Postives = 37/51 (72.55%), Query Frame = 3
Query:   27 VSSNEDYFSSHSMNQTVRIVRDKLDKIESSGGHLEAGSTSKKARVDNRRRI 179
            VSSN+DYF S SMN TV +VR+KLDKI+SS  +  A    KK R DNRRRI
Sbjct:  170 VSSNKDYFPSESMNATVNLVREKLDKIQSSSDNSSAIVAPKKPRTDNRRRI 220          
BLAST of FG535635 vs. TrEMBL
Match: B6SH26_MAIZE (Nucleic acid binding protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 1.100e-7
Identity = 29/51 (56.86%), Postives = 37/51 (72.55%), Query Frame = 3
Query:   27 VSSNEDYFSSHSMNQTVRIVRDKLDKIESSGGHLEAGSTSKKARVDNRRRI 179
            VSS++DYF S SMN TV++VR KLDKI+S G +    + S+K  VD RRRI
Sbjct:  169 VSSDKDYFPSESMNATVKLVRGKLDKIQSGGDNSSTSAASRKPGVDKRRRI 219          
BLAST of FG535635 vs. TrEMBL
Match: D7LIZ6_ARALY (Nucleic acid binding protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_901744 PE=4 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 1.876e-7
Identity = 32/61 (52.46%), Postives = 41/61 (67.21%), Query Frame = 3
Query:   15 PKRTVSSNEDYFSSHSMNQTVRIVRDKLDKIESSGGHLEAGSTS------KKARVDNRRRI 179
            P   VSS+++YF+S SMNQTV+ VR+KL+KIE SG       +S      K+ RVDNRRRI
Sbjct:  163 PVTRVSSDQEYFASSSMNQTVKTVREKLNKIEESGNQKRLQPSSQTQPDLKRTRVDNRRRI 223          
BLAST of FG535635 vs. TAIR peptide
Match: AT5G27300.2 (| Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr5:9620810-9624990 FORWARD LENGTH=550)

HSP 1 Score: 55.4546 bits (132), Expect = 1.788e-8
Identity = 31/61 (50.82%), Postives = 39/61 (63.93%), Query Frame = 3
Query:   15 PKRTVSSNEDYFSSHSMNQTVRIVRDKLDKIESSGGHLEAGSTS------KKARVDNRRRI 179
            P   VSS ++YF+S SMNQ V+ VR+KL+KIE SG       +S      K+ RVDNRRRI
Sbjct:  490 PVTRVSSYQEYFASSSMNQMVKTVREKLNKIEESGNQKRLQPSSQTQPDFKRTRVDNRRRI 550          
BLAST of FG535635 vs. TAIR peptide
Match: AT5G27300.1 (| Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr5:9620810-9624990 FORWARD LENGTH=575)

HSP 1 Score: 55.4546 bits (132), Expect = 1.788e-8
Identity = 31/61 (50.82%), Postives = 39/61 (63.93%), Query Frame = 3
Query:   15 PKRTVSSNEDYFSSHSMNQTVRIVRDKLDKIESSGGHLEAGSTS------KKARVDNRRRI 179
            P   VSS ++YF+S SMNQ V+ VR+KL+KIE SG       +S      K+ RVDNRRRI
Sbjct:  515 PVTRVSSYQEYFASSSMNQMVKTVREKLNKIEESGNQKRLQPSSQTQPDFKRTRVDNRRRI 575          
BLAST of FG535635 vs. TAIR peptide
Match: AT2G27790.2 (| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr2:11847335-11849285 REVERSE LENGTH=240)

HSP 1 Score: 52.373 bits (124), Expect = 1.514e-7
Identity = 32/78 (41.03%), Postives = 41/78 (52.56%), Query Frame = 3
Query:   15 PKRTVSSNEDYFSSHSMNQTVRIVRDKLDKIESSGGHLEAGSTS-----------------------KKARVDNRRRI 179
            P   VSS+++YF+S SMNQTV+ VR+KL+KIE SG       +S                       K+ RVDNRRRI
Sbjct:  163 PVTRVSSDQEYFASSSMNQTVKTVREKLNKIEESGNQKRLQPSSQTQPEESGNQKRLQPSSQIQPDLKRTRVDNRRRI 240          
BLAST of FG535635 vs. TAIR peptide
Match: AT2G27790.1 (| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr2:11847335-11849285 REVERSE LENGTH=240)

HSP 1 Score: 52.373 bits (124), Expect = 1.514e-7
Identity = 32/78 (41.03%), Postives = 41/78 (52.56%), Query Frame = 3
Query:   15 PKRTVSSNEDYFSSHSMNQTVRIVRDKLDKIESSGGHLEAGSTS-----------------------KKARVDNRRRI 179
            P   VSS+++YF+S SMNQTV+ VR+KL+KIE SG       +S                       K+ RVDNRRRI
Sbjct:  163 PVTRVSSDQEYFASSSMNQTVKTVREKLNKIEESGNQKRLQPSSQTQPEESGNQKRLQPSSQIQPDLKRTRVDNRRRI 240          
The following BLAST results are available for this feature:
BLAST of FG535635 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B7FLH0_MEDTR5.085e-2188.14Putative uncharacterized protein OS=Medicago trunc... [more]
D7TDI3_VITVI3.529e-1476.92Whole genome shotgun sequence of line PN40024, sca... [more]
A5BWV4_VITVI3.529e-1476.92Putative uncharacterized protein OS=Vitis vinifera... [more]
B9HPX6_POPTR1.341e-1370.91Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
C6T5J6_SOYBN3.303e-1274.00Putative uncharacterized protein (Fragment) OS=Gly... [more]
B9SH88_RICCO1.255e-1165.45Nucleic acid binding protein, putative OS=Ricinus ... [more]
Q6YPG3_ORYSJ1.299e-862.75Os02g0105000 protein OS=Oryza sativa subsp. japoni... [more]
B8AGW5_ORYSI1.299e-862.75Putative uncharacterized protein OS=Oryza sativa s... [more]
B6SH26_MAIZE1.100e-756.86Nucleic acid binding protein OS=Zea mays PE=2 SV=1[more]
D7LIZ6_ARALY1.876e-752.46Nucleic acid binding protein OS=Arabidopsis lyrata... [more]
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BLAST of FG535635 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 4
Match NameE-valueIdentityDescription
AT5G27300.21.788e-850.82| Symbols: | pentatricopeptide (PPR) repeat-conta... [more]
AT5G27300.11.788e-850.82| Symbols: | pentatricopeptide (PPR) repeat-conta... [more]
AT2G27790.21.514e-741.03| Symbols: | RNA-binding (RRM/RBD/RNP motifs) fam... [more]
AT2G27790.11.514e-741.03| Symbols: | RNA-binding (RRM/RBD/RNP motifs) fam... [more]
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Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FG535635 ID=FG535635; Name=FG535635; organism=Pisum sativum; type=EST; length=496bp
ACAACATCATTCTTCCAAAAAGAACGGTTTCATCTAACGAGGATTATTTT
TCATCCCATTCCATGAATCAAACAGTGAGGATTGTCAGGGATAAGCTTGA
TAAGATTGAATCCAGTGGCGGGCATCTGGAAGCTGGATCAACATCCAAGA
AAGCACGAGTCGATAATAGGAGGAGGATTTAATTTGTAAAAGTCTAAAGT
TTAATGTAGTTGTGGTGTTCTCCTAGGGTGTGTTTGGGAGGTTCTCTTCA
CTCTTTTCGTCCGGATCAAGATCGATCTCCTATTCGGGTTTCATCGAGTA
CATGTCGTAAGAGATAAAATCACATTATCTATAACATGGGTGGGTCTTGC
TCCTGCATTTACCATCCTATATAGGTAGATATTTAACTCCATCTTGTTAG
TTTTTAGGTTGTTTGAAATTTGTAATTGAAAGGAAACTATCAAGGTTAGA
ATGCACTTCTATTCTTATCCTCATCAATATAATTGATATGTTCTTG
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