FG535635
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FG535635 vs. TrEMBL
Match: B7FLH0_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 5.085e-21 Identity = 52/59 (88.14%), Postives = 55/59 (93.22%), Query Frame = 3 Query: 3 NIILPKRTVSSNEDYFSSHSMNQTVRIVRDKLDKIESSGGHLEAGSTSKKARVDNRRRI 179 N LPKRTVSSNEDYFSSHSMNQTVR+VR KLDKI+SSG HL+AGSTSKKARVDNRRRI Sbjct: 164 NSNLPKRTVSSNEDYFSSHSMNQTVRVVRAKLDKIQSSGEHLQAGSTSKKARVDNRRRI 222
BLAST of FG535635 vs. TrEMBL
Match: D7TDI3_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_127.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00013774001 PE=4 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 3.529e-14 Identity = 40/52 (76.92%), Postives = 44/52 (84.62%), Query Frame = 3 Query: 24 TVSSNEDYFSSHSMNQTVRIVRDKLDKIESSGGHLEAGSTSKKARVDNRRRI 179 TVSSN+DYF S SMNQTVR+VR+KLDKI+SS HLEAG KK RVDNRRRI Sbjct: 179 TVSSNQDYFGSPSMNQTVRLVREKLDKIQSSSQHLEAGPAFKKTRVDNRRRI 230
BLAST of FG535635 vs. TrEMBL
Match: A5BWV4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_032503 PE=4 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 3.529e-14 Identity = 40/52 (76.92%), Postives = 44/52 (84.62%), Query Frame = 3 Query: 24 TVSSNEDYFSSHSMNQTVRIVRDKLDKIESSGGHLEAGSTSKKARVDNRRRI 179 TVSSN+DYF S SMNQTVR+VR+KLDKI+SS HLEAG KK RVDNRRRI Sbjct: 179 TVSSNQDYFGSPSMNQTVRLVREKLDKIQSSSQHLEAGPAFKKTRVDNRRRI 230
BLAST of FG535635 vs. TrEMBL
Match: B9HPX6_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_803974 PE=4 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.341e-13 Identity = 39/55 (70.91%), Postives = 46/55 (83.64%), Query Frame = 3 Query: 15 PKRTVSSNEDYFSSHSMNQTVRIVRDKLDKIESSGGHLEAGSTSKKARVDNRRRI 179 P VSS++DYF S SMNQTVR+VR+KL+KI+SS HL+AG SKKARVDNRRRI Sbjct: 180 PITRVSSDQDYFPSQSMNQTVRLVREKLNKIQSSSEHLQAGPVSKKARVDNRRRI 234
BLAST of FG535635 vs. TrEMBL
Match: C6T5J6_SOYBN (Putative uncharacterized protein (Fragment) OS=Glycine max PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 3.303e-12 Identity = 37/50 (74.00%), Postives = 43/50 (86.00%), Query Frame = 3 Query: 15 PKRTVSSNEDYFSSHSMNQTVRIVRDKLDKIESSGGHLEAGSTSKKARVD 164 P R VSSNEDYF+S+SMNQTV +VRDKLDKI+SSG + +AGS SKK RVD Sbjct: 167 PIRMVSSNEDYFASNSMNQTVSLVRDKLDKIQSSGENTKAGSASKKQRVD 216
BLAST of FG535635 vs. TrEMBL
Match: B9SH88_RICCO (Nucleic acid binding protein, putative OS=Ricinus communis GN=RCOM_0527840 PE=4 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.255e-11 Identity = 36/55 (65.45%), Postives = 44/55 (80.00%), Query Frame = 3 Query: 15 PKRTVSSNEDYFSSHSMNQTVRIVRDKLDKIESSGGHLEAGSTSKKARVDNRRRI 179 P VSSN++YF S SMNQTV +VR+KL+KI+SS HL+A SKK+RVDNRRRI Sbjct: 162 PITRVSSNQEYFPSQSMNQTVSLVREKLNKIQSSSEHLQAVPASKKSRVDNRRRI 216
BLAST of FG535635 vs. TrEMBL
Match: Q6YPG3_ORYSJ (Os02g0105000 protein OS=Oryza sativa subsp. japonica GN=OJA1212_C06.21-1 PE=2 SV=1) HSP 1 Score: 62.7734 bits (151), Expect = 1.299e-8 Identity = 32/51 (62.75%), Postives = 37/51 (72.55%), Query Frame = 3 Query: 27 VSSNEDYFSSHSMNQTVRIVRDKLDKIESSGGHLEAGSTSKKARVDNRRRI 179 VSSN+DYF S SMN TV +VR+KLDKI+SS + A KK R DNRRRI Sbjct: 170 VSSNKDYFPSESMNATVNLVREKLDKIQSSSDNSSAIVAPKKPRTDNRRRI 220
BLAST of FG535635 vs. TrEMBL
Match: B8AGW5_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_05486 PE=4 SV=1) HSP 1 Score: 62.7734 bits (151), Expect = 1.299e-8 Identity = 32/51 (62.75%), Postives = 37/51 (72.55%), Query Frame = 3 Query: 27 VSSNEDYFSSHSMNQTVRIVRDKLDKIESSGGHLEAGSTSKKARVDNRRRI 179 VSSN+DYF S SMN TV +VR+KLDKI+SS + A KK R DNRRRI Sbjct: 170 VSSNKDYFPSESMNATVNLVREKLDKIQSSSDNSSAIVAPKKPRTDNRRRI 220
BLAST of FG535635 vs. TrEMBL
Match: B6SH26_MAIZE (Nucleic acid binding protein OS=Zea mays PE=2 SV=1) HSP 1 Score: 59.6918 bits (143), Expect = 1.100e-7 Identity = 29/51 (56.86%), Postives = 37/51 (72.55%), Query Frame = 3 Query: 27 VSSNEDYFSSHSMNQTVRIVRDKLDKIESSGGHLEAGSTSKKARVDNRRRI 179 VSS++DYF S SMN TV++VR KLDKI+S G + + S+K VD RRRI Sbjct: 169 VSSDKDYFPSESMNATVKLVRGKLDKIQSGGDNSSTSAASRKPGVDKRRRI 219
BLAST of FG535635 vs. TrEMBL
Match: D7LIZ6_ARALY (Nucleic acid binding protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_901744 PE=4 SV=1) HSP 1 Score: 58.9214 bits (141), Expect = 1.876e-7 Identity = 32/61 (52.46%), Postives = 41/61 (67.21%), Query Frame = 3 Query: 15 PKRTVSSNEDYFSSHSMNQTVRIVRDKLDKIESSGGHLEAGSTS------KKARVDNRRRI 179 P VSS+++YF+S SMNQTV+ VR+KL+KIE SG +S K+ RVDNRRRI Sbjct: 163 PVTRVSSDQEYFASSSMNQTVKTVREKLNKIEESGNQKRLQPSSQTQPDLKRTRVDNRRRI 223
BLAST of FG535635 vs. TAIR peptide
Match: AT5G27300.2 (| Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr5:9620810-9624990 FORWARD LENGTH=550) HSP 1 Score: 55.4546 bits (132), Expect = 1.788e-8 Identity = 31/61 (50.82%), Postives = 39/61 (63.93%), Query Frame = 3 Query: 15 PKRTVSSNEDYFSSHSMNQTVRIVRDKLDKIESSGGHLEAGSTS------KKARVDNRRRI 179 P VSS ++YF+S SMNQ V+ VR+KL+KIE SG +S K+ RVDNRRRI Sbjct: 490 PVTRVSSYQEYFASSSMNQMVKTVREKLNKIEESGNQKRLQPSSQTQPDFKRTRVDNRRRI 550
BLAST of FG535635 vs. TAIR peptide
Match: AT5G27300.1 (| Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr5:9620810-9624990 FORWARD LENGTH=575) HSP 1 Score: 55.4546 bits (132), Expect = 1.788e-8 Identity = 31/61 (50.82%), Postives = 39/61 (63.93%), Query Frame = 3 Query: 15 PKRTVSSNEDYFSSHSMNQTVRIVRDKLDKIESSGGHLEAGSTS------KKARVDNRRRI 179 P VSS ++YF+S SMNQ V+ VR+KL+KIE SG +S K+ RVDNRRRI Sbjct: 515 PVTRVSSYQEYFASSSMNQMVKTVREKLNKIEESGNQKRLQPSSQTQPDFKRTRVDNRRRI 575
BLAST of FG535635 vs. TAIR peptide
Match: AT2G27790.2 (| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr2:11847335-11849285 REVERSE LENGTH=240) HSP 1 Score: 52.373 bits (124), Expect = 1.514e-7 Identity = 32/78 (41.03%), Postives = 41/78 (52.56%), Query Frame = 3 Query: 15 PKRTVSSNEDYFSSHSMNQTVRIVRDKLDKIESSGGHLEAGSTS-----------------------KKARVDNRRRI 179 P VSS+++YF+S SMNQTV+ VR+KL+KIE SG +S K+ RVDNRRRI Sbjct: 163 PVTRVSSDQEYFASSSMNQTVKTVREKLNKIEESGNQKRLQPSSQTQPEESGNQKRLQPSSQIQPDLKRTRVDNRRRI 240
BLAST of FG535635 vs. TAIR peptide
Match: AT2G27790.1 (| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr2:11847335-11849285 REVERSE LENGTH=240) HSP 1 Score: 52.373 bits (124), Expect = 1.514e-7 Identity = 32/78 (41.03%), Postives = 41/78 (52.56%), Query Frame = 3 Query: 15 PKRTVSSNEDYFSSHSMNQTVRIVRDKLDKIESSGGHLEAGSTS-----------------------KKARVDNRRRI 179 P VSS+++YF+S SMNQTV+ VR+KL+KIE SG +S K+ RVDNRRRI Sbjct: 163 PVTRVSSDQEYFASSSMNQTVKTVREKLNKIEESGNQKRLQPSSQTQPEESGNQKRLQPSSQIQPDLKRTRVDNRRRI 240 The following BLAST results are available for this feature:
BLAST of FG535635 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl) Total hits: 10
BLAST of FG535635 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FG535635 ID=FG535635; Name=FG535635; organism=Pisum sativum; type=EST; length=496bpback to top |