FG537509

EST Overview
NameFG537509
Unique NameFG537509
TypeEST
OrganismPisum sativum (pea)
Sequence length225
Libraries
Library NameType
LIBEST_023215 MeriZ Pisum sativum Shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v2Pisum sativum unigene v2EST
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Pisum sativum unigene v22011-03-01
Homology Analysis: Pisum sativum unigene v2 vs Lotus proteins2011-04-21
Homology Analysis: Pisum sativum unigene v2 vs Medicago proteins2011-04-21
Homology
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BLAST of FG537509 vs. Lotus protein
Match: chr4.CM0229.130.r2.m (+ phase: 0 )

HSP 1 Score: 53.9138 bits (128), Expect = 1.586e-8
Identity = 27/38 (71.05%), Postives = 30/38 (78.95%), Query Frame = 1 
Query:    4 PTYSG-SPSSKINESQAKHIFDMDMVVDQGGY-ADSMW 111
            PTY+   PSSKI ESQAKH+FDMDM+VD  GY  DSMW
Sbjct:  137 PTYTSVPPSSKILESQAKHVFDMDMMVDHAGYGGDSMW 174
[Close]
BLAST of FG537509 vs. Medicago proteins
Match: IMGA|Medtr4g083680.1 (LOB domain-containing protein 4 (AHRD V1 ***- Q9SHE9); contains Interpro domain(s) IPR004883 Lateral organ boundaries, LOB chr04_pseudomolecule_IMGAG_V3.5 28617102-28620592 E EGN_Mt100125 20100825)

HSP 1 Score: 65.855 bits (159), Expect = 5.726e-12
Identity = 32/37 (86.49%), Postives = 33/37 (89.19%), Query Frame = 1 
Query:    4 PTYSGSPSSKINESQ-AKHIFDMDMVVDQGGYADSMW 111
            PTYSGSPSSKINESQ AK+IFDMDMVVDQ  Y DSMW
Sbjct:  138 PTYSGSPSSKINESQQAKNIFDMDMVVDQAAYGDSMW 174
The following BLAST results are available for this feature:
BLAST of FG537509 vs. Lotus protein
Analysis Date: 2011-04-21 (Homology Analysis: Pisum sativum unigene v2 vs Lotus proteins)
Total hits: 1
Match NameE-valueIdentityDescription
chr4.CM0229.130.r2.m1.586e-871.05+ phase: 0 [more]
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BLAST of FG537509 vs. Medicago proteins
Analysis Date: 2011-04-21 (Homology Analysis: Pisum sativum unigene v2 vs Medicago proteins)
Total hits: 1
Match NameE-valueIdentityDescription
IMGA|Medtr4g083680.15.726e-1286.49LOB domain-containing protein 4 (AHRD V1 ***- Q9SH... [more]
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Properties
Property NameValue
Singlet in analysisPisum sativum unigene v2
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FG537509 ID=FG537509; Name=FG537509; organism=Pisum sativum; type=EST; length=225bp
ATTCCAACCTATAGTGGCTCTCCATCATCCAAAATCAATGAATCACAAGC
CAAACATATTTTTGATATGGACATGGTGGTGGACCAAGGTGGTTATGCTG
ATTCAATGTGGTGATGCAATACAATGCAACTACTATGGTTAATATATATA
ATTATATATACACTAGCACTATCTATTTAGACTATACAAGAGGGATACAT
TATTTTTTAAAGTAATGTTTTCTCC
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