FG538838

EST Overview


Name	FG538838
Unique Name	FG538838
Type	EST
Organism	Pisum sativum (pea)
Sequence length	507

Libraries


Library Name	Type
LIBEST_023215 MeriZ Pisum sativum Shoot apical meristem ESTs	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Pisum sativum unigene v2	Pisum sativum unigene v2	EST
Pisum sativum unigene v1	Pisum sativum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Pisum sativum unigene v1	2010-12-27
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide	2011-02-03
Pisum sativum unigene v2	2011-03-01
Homology Analysis: Pisum sativum unigene v2 vs TAIR 10 peptide	2011-04-21
Homology Analysis: Pisum sativum unigene v2 vs Soybean peptides	2011-04-21
InterProScan analysis for Pisum sativum unigene v2	2011-04-27
InterProScan analysis for Pisum sativum unigene v1	2010-12-29

Homology

[Close]

BLAST of FG538838 vs. TAIR peptide
Match: AT2G21470.3 (| Symbols: SAE2 | SUMO-activating enzyme 2 | chr2:9198752-9202136 FORWARD LENGTH=628)

HSP 1 Score: 50.447 bits (119), Expect = 6.158e-7
Identity = 22/35 (62.86%), Postives = 26/35 (74.29%), Query Frame = -1

Query:  364 YTITYITSTPSRLVHCIVWAKRLLFPKKFWGKNED 468
            Y +  ITSTP++ VHCIVWAK LLF K F  KN+D
Sbjct:  165 YPVCTITSTPTKFVHCIVWAKDLLFAKLFGDKNQD 199

[Close]

BLAST of FG538838 vs. TAIR peptide
Match: AT2G21470.2 (| Symbols: SAE2, ATSAE2, EMB2764 | SUMO-activating enzyme 2 | chr2:9198752-9202136 FORWARD LENGTH=700)

HSP 1 Score: 50.447 bits (119), Expect = 6.158e-7
Identity = 22/35 (62.86%), Postives = 26/35 (74.29%), Query Frame = -1

Query:  364 YTITYITSTPSRLVHCIVWAKRLLFPKKFWGKNED 468
            Y +  ITSTP++ VHCIVWAK LLF K F  KN+D
Sbjct:  165 YPVCTITSTPTKFVHCIVWAKDLLFAKLFGDKNQD 199

[Close]

BLAST of FG538838 vs. TAIR peptide
Match: AT2G21470.1 (| Symbols: SAE2, ATSAE2, EMB2764 | SUMO-activating enzyme 2 | chr2:9198752-9202136 FORWARD LENGTH=625)

HSP 1 Score: 50.447 bits (119), Expect = 6.158e-7
Identity = 22/35 (62.86%), Postives = 26/35 (74.29%), Query Frame = -1

Query:  364 YTITYITSTPSRLVHCIVWAKRLLFPKKFWGKNED 468
            Y +  ITSTP++ VHCIVWAK LLF K F  KN+D
Sbjct:  165 YPVCTITSTPTKFVHCIVWAKDLLFAKLFGDKNQD 199

[Close]

Query:  364 YTITYITSTPSRLVHCIVWAKRLLFPKKFWGKNED 468
            Y +  ITSTP++ VHCIVWAK LLF K F  KN+D
Sbjct:  165 YPVCTITSTPTKFVHCIVWAKDLLFAKLFGDKNQD 199

[Close]

Query:  364 YTITYITSTPSRLVHCIVWAKRLLFPKKFWGKNED 468
            Y +  ITSTP++ VHCIVWAK LLF K F  KN+D
Sbjct:  165 YPVCTITSTPTKFVHCIVWAKDLLFAKLFGDKNQD 199

[Close]

Query:  364 YTITYITSTPSRLVHCIVWAKRLLFPKKFWGKNED 468
            Y +  ITSTP++ VHCIVWAK LLF K F  KN+D
Sbjct:  165 YPVCTITSTPTKFVHCIVWAKDLLFAKLFGDKNQD 199

[Close]

BLAST of FG538838 vs. Soybean peptides
Match: Glyma13g27140.1|PACid:16291717 ()

HSP 1 Score: 51.6026 bits (122), Expect = 4.117e-7
Identity = 23/35 (65.71%), Postives = 26/35 (74.29%), Query Frame = -1

Query:  364 YTITYITSTPSRLVHCIVWAKRLLFPKKFWGKNED 468
            Y +  ITSTPS+ VHCIVWAK LLF K F  KN+D
Sbjct:  166 YPVCTITSTPSKFVHCIVWAKDLLFAKLFGDKNQD 200

[Close]

BLAST of FG538838 vs. Soybean peptides
Match: Glyma12g36450.1|PACid:16289095 ()

HSP 1 Score: 51.6026 bits (122), Expect = 4.117e-7
Identity = 23/35 (65.71%), Postives = 26/35 (74.29%), Query Frame = -1

Query:  364 YTITYITSTPSRLVHCIVWAKRLLFPKKFWGKNED 468
            Y +  ITSTPS+ VHCIVWAK LLF K F  KN+D
Sbjct:  164 YPVCTITSTPSKFVHCIVWAKDLLFAKLFGDKNQD 198

The following BLAST results are available for this feature:

BLAST of FG538838 vs. TAIR peptide
BLAST of FG538838 vs. TAIR peptide
BLAST of FG538838 vs. Soybean peptides

BLAST of FG538838 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 3


Match Name	E-value	Identity	Description
AT2G21470.3	6.158e-7	62.86	\| Symbols: SAE2 \| SUMO-activating enzyme 2 \| chr2:...	[more]
AT2G21470.2	6.158e-7	62.86	\| Symbols: SAE2, ATSAE2, EMB2764 \| SUMO-activating...	[more]
AT2G21470.1	6.158e-7	62.86	\| Symbols: SAE2, ATSAE2, EMB2764 \| SUMO-activating...	[more]

BLAST of FG538838 vs. TAIR peptide
Analysis Date: 2011-04-21 (Homology Analysis: Pisum sativum unigene v2 vs TAIR 10 peptide)
Total hits: 3


Match Name	E-value	Identity	Description
AT2G21470.3	6.158e-7	62.86	\| Symbols: SAE2 \| SUMO-activating enzyme 2 \| chr2:...	[more]
AT2G21470.2	6.158e-7	62.86	\| Symbols: SAE2, ATSAE2, EMB2764 \| SUMO-activating...	[more]
AT2G21470.1	6.158e-7	62.86	\| Symbols: SAE2, ATSAE2, EMB2764 \| SUMO-activating...	[more]

BLAST of FG538838 vs. Soybean peptides
Analysis Date: 2011-04-21 (Homology Analysis: Pisum sativum unigene v2 vs Soybean peptides)
Total hits: 2


Match Name	E-value	Identity	Description
Glyma13g27140.1\|PACid:16291717	4.117e-7	65.71		[more]
Glyma12g36450.1\|PACid:16289095	4.117e-7	65.71		[more]

InterPro

Analysis Name: InterProScan analysis for Pisum sativum unigene v2
Date Performed: 2011-04-27


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019572	Ubiquitin-activating enzyme	PFAM	PF10585	UBA_e1_thiolCys	coord: 11..34 score: 6.1
None	No IPR available	GENE3D	1.10.3240.10	no description	coord: 11..43 score: 3.1

Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019572	Ubiquitin-activating enzyme	PFAM	PF10585	UBA_e1_thiolCys	coord: 11..34 score: 6.1
None	No IPR available	GENE3D	1.10.3240.10	no description	coord: 11..43 score: 3.1

Properties


Property Name	Value
Singlet in analysis	Pisum sativum unigene v2
Singlet in analysis	Pisum sativum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>FG538838 ID=FG538838; Name=FG538838; organism=Pisum sativum; type=EST; length=507bp
AATCCAAGCCCCTCTGCAATTGATTAAGACTCCAATTTATAGAGCTTCCT
TGAGCATGAAGTGGAAGGTCAAATGGATCTGATGGATGACAATGGTTGCT
CGTCATACCTACAGCAGCTGCCACGTATGCGTGCCTAAGACTACTTTGGA
TCCTTACTCACAAGTAAGGTTGCACCATGAGTAATCCACCCTCCATCATT
CTTTGTTGAGCTTTGAAGTTGGTGATGATGATTCGGAGTTGTTGTCCCTA
GAGTACCATACTGAATCTACACCTAACTTGGATGGCAAAGGACGCCAAAA
CAGTTGTAGCAACCGTCTTTACTGTTGGGTTTGTGTCCTATTTCTGAGTT
GGCAGCTTCTAATGTCCTCATTCTTGCCCCAAAATTTCTTGGGAAAAAGT
AGCCTTTTTGCCCATACAATGCAGTGAACAAGTCTTGATGGAGTACTGGT
GATATATGTAATGGTGTAATGTATGAACACATTTTAATAAAATGCTTCAT
TTCCTTT

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **INTERPRO**
Term	Definition
IPR019572	UBA_E1_SCCH

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