FG539006
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FG539006 vs. TrEMBL
Match: B9GPH8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_644349 PE=4 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.631e-11 Identity = 34/43 (79.07%), Postives = 38/43 (88.37%), Query Frame = 3 Query: 9 LLLFDALHGVSLHAHNINNNTLLRSKLQEFGSMAQMRDPPLLR 137 L+LFDALH V+ HAH+IN NT LRSKLQEFGSM QM+DPPLLR Sbjct: 17 LVLFDALHEVASHAHSINTNTTLRSKLQEFGSMTQMQDPPLLR 59
BLAST of FG539006 vs. TrEMBL
Match: D7LRV1_ARALY (Guanine nucleotide exchange family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_486560 PE=4 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.633e-11 Identity = 32/43 (74.42%), Postives = 38/43 (88.37%), Query Frame = 3 Query: 9 LLLFDALHGVSLHAHNINNNTLLRSKLQEFGSMAQMRDPPLLR 137 L+L DALHGV+LHAH IN+NT+LRS+LQE G M QM+DPPLLR Sbjct: 1606 LVLLDALHGVALHAHGINSNTILRSRLQELGPMTQMQDPPLLR 1648
BLAST of FG539006 vs. TrEMBL
Match: Q9LZX8_ARATH (Guanine nucleotide exchange factor-like protein OS=Arabidopsis thaliana GN=T4C21_270 PE=4 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 4.745e-11 Identity = 32/43 (74.42%), Postives = 38/43 (88.37%), Query Frame = 3 Query: 9 LLLFDALHGVSLHAHNINNNTLLRSKLQEFGSMAQMRDPPLLR 137 L+L DALHGV+LHAH IN+NT+LRS+LQE G M QM+DPPLLR Sbjct: 1604 LVLVDALHGVALHAHGINSNTILRSRLQELGPMTQMQDPPLLR 1646
BLAST of FG539006 vs. TrEMBL
Match: D7U7T4_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_48.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00027623001 PE=4 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.057e-10 Identity = 31/44 (70.45%), Postives = 39/44 (88.64%), Query Frame = 3 Query: 6 ILLLFDALHGVSLHAHNINNNTLLRSKLQEFGSMAQMRDPPLLR 137 I++LF+A+H V+ HAH IN+NT+LRSKLQE GSM QM+DPPLLR Sbjct: 1568 IIVLFNAMHDVASHAHKINSNTILRSKLQELGSMTQMQDPPLLR 1611
BLAST of FG539006 vs. TrEMBL
Match: B9RDE3_RICCO (Cytohesin 1, 2, 3, putative OS=Ricinus communis GN=RCOM_1612320 PE=4 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.076e-10 Identity = 31/43 (72.09%), Postives = 37/43 (86.05%), Query Frame = 3 Query: 9 LLLFDALHGVSLHAHNINNNTLLRSKLQEFGSMAQMRDPPLLR 137 L+LFDALH V+ HAH IN +T LR++LQEFGSM QM+DPPLLR Sbjct: 1596 LVLFDALHDVASHAHKINTDTTLRARLQEFGSMTQMQDPPLLR 1638
BLAST of FG539006 vs. TrEMBL
Match: B9IC07_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_572117 PE=4 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.017e-10 Identity = 32/43 (74.42%), Postives = 36/43 (83.72%), Query Frame = 3 Query: 9 LLLFDALHGVSLHAHNINNNTLLRSKLQEFGSMAQMRDPPLLR 137 L+LFDALH V+ HAH+IN N LRSKL EFGSM QM+DPPLLR Sbjct: 1599 LVLFDALHDVASHAHSINTNIALRSKLLEFGSMTQMQDPPLLR 1641
BLAST of FG539006 vs. TrEMBL
Match: C5WQY7_SORBI (Putative uncharacterized protein Sb01g041140 OS=Sorghum bicolor GN=Sb01g041140 PE=4 SV=1) HSP 1 Score: 63.5438 bits (153), Expect = 7.575e-9 Identity = 29/43 (67.44%), Postives = 37/43 (86.05%), Query Frame = 3 Query: 9 LLLFDALHGVSLHAHNINNNTLLRSKLQEFGSMAQMRDPPLLR 137 ++LF+ALH V+ HAH IN+++ LRSKLQE GSM QM+DPPLLR Sbjct: 1610 VILFEALHTVAAHAHKINSDSDLRSKLQELGSMTQMQDPPLLR 1652
BLAST of FG539006 vs. TrEMBL
Match: Q8S565_ORYSA (Guanine nucleotide-exchange protein GEP2 OS=Oryza sativa GN=GEP2 PE=2 SV=1) HSP 1 Score: 63.1586 bits (152), Expect = 9.894e-9 Identity = 29/43 (67.44%), Postives = 36/43 (83.72%), Query Frame = 3 Query: 9 LLLFDALHGVSLHAHNINNNTLLRSKLQEFGSMAQMRDPPLLR 137 ++LF+ALH V+ HAH IN++ LRSKLQE GSM QM+DPPLLR Sbjct: 1606 VILFEALHTVATHAHKINSDNDLRSKLQELGSMTQMQDPPLLR 1648
BLAST of FG539006 vs. TrEMBL
Match: Q10P53_ORYSJ (Os03g0246800 protein OS=Oryza sativa subsp. japonica GN=Os03g0246800 PE=4 SV=1) HSP 1 Score: 63.1586 bits (152), Expect = 9.894e-9 Identity = 29/43 (67.44%), Postives = 36/43 (83.72%), Query Frame = 3 Query: 9 LLLFDALHGVSLHAHNINNNTLLRSKLQEFGSMAQMRDPPLLR 137 ++LF+ALH V+ HAH IN++ LRSKLQE GSM QM+DPPLLR Sbjct: 1606 VILFEALHTVATHAHKINSDNDLRSKLQELGSMTQMQDPPLLR 1648
BLAST of FG539006 vs. TrEMBL
Match: B9F6R9_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_10127 PE=4 SV=1) HSP 1 Score: 63.1586 bits (152), Expect = 9.894e-9 Identity = 29/43 (67.44%), Postives = 36/43 (83.72%), Query Frame = 3 Query: 9 LLLFDALHGVSLHAHNINNNTLLRSKLQEFGSMAQMRDPPLLR 137 ++LF+ALH V+ HAH IN++ LRSKLQE GSM QM+DPPLLR Sbjct: 1606 VILFEALHTVATHAHKINSDNDLRSKLQELGSMTQMQDPPLLR 1648
BLAST of FG539006 vs. TAIR peptide
Match: AT3G60860.1 (| Symbols: | SEC7-like guanine nucleotide exchange family protein | chr3:22484804-22491510 FORWARD LENGTH=1793) HSP 1 Score: 70.8626 bits (172), Expect = 1.859e-13 Identity = 32/43 (74.42%), Postives = 38/43 (88.37%), Query Frame = 3 Query: 9 LLLFDALHGVSLHAHNINNNTLLRSKLQEFGSMAQMRDPPLLR 137 L+L DALHGV+LHAH IN+NT+LRS+LQE G M QM+DPPLLR Sbjct: 1604 LVLVDALHGVALHAHGINSNTILRSRLQELGPMTQMQDPPLLR 1646
BLAST of FG539006 vs. TAIR peptide
Match: AT1G01960.1 (| Symbols: EDA10 | SEC7-like guanine nucleotide exchange family protein | chr1:330830-337582 REVERSE LENGTH=1750) HSP 1 Score: 55.4546 bits (132), Expect = 8.081e-9 Identity = 25/44 (56.82%), Postives = 34/44 (77.27%), Query Frame = 3 Query: 6 ILLLFDALHGVSLHAHNINNNTLLRSKLQEFGSMAQMRDPPLLR 137 +L+LFDA+HG+ +AH IN + LLRSKLQE GS + ++ PLLR Sbjct: 1571 MLMLFDAMHGIGSNAHKINADLLLRSKLQELGSSLESQEAPLLR 1614 The following BLAST results are available for this feature:
BLAST of FG539006 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl) Total hits: 10
BLAST of FG539006 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FG539006 ID=FG539006; Name=FG539006; organism=Pisum sativum; type=EST; length=138bpback to top |