FG539006

EST Overview
NameFG539006
Unique NameFG539006
TypeEST
OrganismPisum sativum (pea)
Sequence length138
Libraries
Library NameType
LIBEST_023215 MeriZ Pisum sativum Shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
Homology
BLAST of FG539006 vs. TrEMBL
Match: B9GPH8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_644349 PE=4 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.631e-11
Identity = 34/43 (79.07%), Postives = 38/43 (88.37%), Query Frame = 3
Query:    9 LLLFDALHGVSLHAHNINNNTLLRSKLQEFGSMAQMRDPPLLR 137
            L+LFDALH V+ HAH+IN NT LRSKLQEFGSM QM+DPPLLR
Sbjct:   17 LVLFDALHEVASHAHSINTNTTLRSKLQEFGSMTQMQDPPLLR 59          
BLAST of FG539006 vs. TrEMBL
Match: D7LRV1_ARALY (Guanine nucleotide exchange family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_486560 PE=4 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.633e-11
Identity = 32/43 (74.42%), Postives = 38/43 (88.37%), Query Frame = 3
Query:    9 LLLFDALHGVSLHAHNINNNTLLRSKLQEFGSMAQMRDPPLLR 137
            L+L DALHGV+LHAH IN+NT+LRS+LQE G M QM+DPPLLR
Sbjct: 1606 LVLLDALHGVALHAHGINSNTILRSRLQELGPMTQMQDPPLLR 1648          
BLAST of FG539006 vs. TrEMBL
Match: Q9LZX8_ARATH (Guanine nucleotide exchange factor-like protein OS=Arabidopsis thaliana GN=T4C21_270 PE=4 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 4.745e-11
Identity = 32/43 (74.42%), Postives = 38/43 (88.37%), Query Frame = 3
Query:    9 LLLFDALHGVSLHAHNINNNTLLRSKLQEFGSMAQMRDPPLLR 137
            L+L DALHGV+LHAH IN+NT+LRS+LQE G M QM+DPPLLR
Sbjct: 1604 LVLVDALHGVALHAHGINSNTILRSRLQELGPMTQMQDPPLLR 1646          
BLAST of FG539006 vs. TrEMBL
Match: D7U7T4_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_48.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00027623001 PE=4 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.057e-10
Identity = 31/44 (70.45%), Postives = 39/44 (88.64%), Query Frame = 3
Query:    6 ILLLFDALHGVSLHAHNINNNTLLRSKLQEFGSMAQMRDPPLLR 137
            I++LF+A+H V+ HAH IN+NT+LRSKLQE GSM QM+DPPLLR
Sbjct: 1568 IIVLFNAMHDVASHAHKINSNTILRSKLQELGSMTQMQDPPLLR 1611          
BLAST of FG539006 vs. TrEMBL
Match: B9RDE3_RICCO (Cytohesin 1, 2, 3, putative OS=Ricinus communis GN=RCOM_1612320 PE=4 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.076e-10
Identity = 31/43 (72.09%), Postives = 37/43 (86.05%), Query Frame = 3
Query:    9 LLLFDALHGVSLHAHNINNNTLLRSKLQEFGSMAQMRDPPLLR 137
            L+LFDALH V+ HAH IN +T LR++LQEFGSM QM+DPPLLR
Sbjct: 1596 LVLFDALHDVASHAHKINTDTTLRARLQEFGSMTQMQDPPLLR 1638          
BLAST of FG539006 vs. TrEMBL
Match: B9IC07_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_572117 PE=4 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.017e-10
Identity = 32/43 (74.42%), Postives = 36/43 (83.72%), Query Frame = 3
Query:    9 LLLFDALHGVSLHAHNINNNTLLRSKLQEFGSMAQMRDPPLLR 137
            L+LFDALH V+ HAH+IN N  LRSKL EFGSM QM+DPPLLR
Sbjct: 1599 LVLFDALHDVASHAHSINTNIALRSKLLEFGSMTQMQDPPLLR 1641          
BLAST of FG539006 vs. TrEMBL
Match: C5WQY7_SORBI (Putative uncharacterized protein Sb01g041140 OS=Sorghum bicolor GN=Sb01g041140 PE=4 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 7.575e-9
Identity = 29/43 (67.44%), Postives = 37/43 (86.05%), Query Frame = 3
Query:    9 LLLFDALHGVSLHAHNINNNTLLRSKLQEFGSMAQMRDPPLLR 137
            ++LF+ALH V+ HAH IN+++ LRSKLQE GSM QM+DPPLLR
Sbjct: 1610 VILFEALHTVAAHAHKINSDSDLRSKLQELGSMTQMQDPPLLR 1652          
BLAST of FG539006 vs. TrEMBL
Match: Q8S565_ORYSA (Guanine nucleotide-exchange protein GEP2 OS=Oryza sativa GN=GEP2 PE=2 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 9.894e-9
Identity = 29/43 (67.44%), Postives = 36/43 (83.72%), Query Frame = 3
Query:    9 LLLFDALHGVSLHAHNINNNTLLRSKLQEFGSMAQMRDPPLLR 137
            ++LF+ALH V+ HAH IN++  LRSKLQE GSM QM+DPPLLR
Sbjct: 1606 VILFEALHTVATHAHKINSDNDLRSKLQELGSMTQMQDPPLLR 1648          
BLAST of FG539006 vs. TrEMBL
Match: Q10P53_ORYSJ (Os03g0246800 protein OS=Oryza sativa subsp. japonica GN=Os03g0246800 PE=4 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 9.894e-9
Identity = 29/43 (67.44%), Postives = 36/43 (83.72%), Query Frame = 3
Query:    9 LLLFDALHGVSLHAHNINNNTLLRSKLQEFGSMAQMRDPPLLR 137
            ++LF+ALH V+ HAH IN++  LRSKLQE GSM QM+DPPLLR
Sbjct: 1606 VILFEALHTVATHAHKINSDNDLRSKLQELGSMTQMQDPPLLR 1648          
BLAST of FG539006 vs. TrEMBL
Match: B9F6R9_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_10127 PE=4 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 9.894e-9
Identity = 29/43 (67.44%), Postives = 36/43 (83.72%), Query Frame = 3
Query:    9 LLLFDALHGVSLHAHNINNNTLLRSKLQEFGSMAQMRDPPLLR 137
            ++LF+ALH V+ HAH IN++  LRSKLQE GSM QM+DPPLLR
Sbjct: 1606 VILFEALHTVATHAHKINSDNDLRSKLQELGSMTQMQDPPLLR 1648          
BLAST of FG539006 vs. TAIR peptide
Match: AT3G60860.1 (| Symbols: | SEC7-like guanine nucleotide exchange family protein | chr3:22484804-22491510 FORWARD LENGTH=1793)

HSP 1 Score: 70.8626 bits (172), Expect = 1.859e-13
Identity = 32/43 (74.42%), Postives = 38/43 (88.37%), Query Frame = 3
Query:    9 LLLFDALHGVSLHAHNINNNTLLRSKLQEFGSMAQMRDPPLLR 137
            L+L DALHGV+LHAH IN+NT+LRS+LQE G M QM+DPPLLR
Sbjct: 1604 LVLVDALHGVALHAHGINSNTILRSRLQELGPMTQMQDPPLLR 1646          
BLAST of FG539006 vs. TAIR peptide
Match: AT1G01960.1 (| Symbols: EDA10 | SEC7-like guanine nucleotide exchange family protein | chr1:330830-337582 REVERSE LENGTH=1750)

HSP 1 Score: 55.4546 bits (132), Expect = 8.081e-9
Identity = 25/44 (56.82%), Postives = 34/44 (77.27%), Query Frame = 3
Query:    6 ILLLFDALHGVSLHAHNINNNTLLRSKLQEFGSMAQMRDPPLLR 137
            +L+LFDA+HG+  +AH IN + LLRSKLQE GS  + ++ PLLR
Sbjct: 1571 MLMLFDAMHGIGSNAHKINADLLLRSKLQELGSSLESQEAPLLR 1614          
The following BLAST results are available for this feature:
BLAST of FG539006 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B9GPH8_POPTR1.631e-1179.07Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
D7LRV1_ARALY3.633e-1174.42Guanine nucleotide exchange family protein OS=Arab... [more]
Q9LZX8_ARATH4.745e-1174.42Guanine nucleotide exchange factor-like protein OS... [more]
D7U7T4_VITVI1.057e-1070.45Whole genome shotgun sequence of line PN40024, sca... [more]
B9RDE3_RICCO3.076e-1072.09Cytohesin 1, 2, 3, putative OS=Ricinus communis GN... [more]
B9IC07_POPTR4.017e-1074.42Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
C5WQY7_SORBI7.575e-967.44Putative uncharacterized protein Sb01g041140 OS=So... [more]
Q8S565_ORYSA9.894e-967.44Guanine nucleotide-exchange protein GEP2 OS=Oryza ... [more]
Q10P53_ORYSJ9.894e-967.44Os03g0246800 protein OS=Oryza sativa subsp. japoni... [more]
B9F6R9_ORYSJ9.894e-967.44Putative uncharacterized protein OS=Oryza sativa s... [more]
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BLAST of FG539006 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT3G60860.11.859e-1374.42| Symbols: | SEC7-like guanine nucleotide exchang... [more]
AT1G01960.18.081e-956.82| Symbols: EDA10 | SEC7-like guanine nucleotide ex... [more]
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Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FG539006 ID=FG539006; Name=FG539006; organism=Pisum sativum; type=EST; length=138bp
ATACCATACTACTCCTATTTGATGCTTTGCATGGTGTATCATTACATGCG
CACAACATTAACAACAATACTCTATTGCGTTCCAAGCTTCAAGAGTTTGG
CTCTATGGCCCAAATGCGAGACCCTCCATTGTTACGTC
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