EX568965

EST Overview
NameEX568965
Unique NameEX568965
TypeEST
OrganismPisum sativum (pea)
Sequence length138
Libraries
Library NameType
LIBEST_021973 Pisum sativum shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v2Pisum sativum unigene v2EST
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Pisum sativum unigene v22011-03-01
Homology Analysis: Pisum sativum unigene v2 vs Lotus proteins2011-04-21
Homology Analysis: Pisum sativum unigene v2 vs Soybean peptides2011-04-21
Homology Analysis: Pisum sativum unigene v2 vs Medicago proteins2011-04-21
Homology
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BLAST of EX568965 vs. Lotus protein
Match: chr2.CM0191.90.r2.m (+ phase: 0 )

HSP 1 Score: 69.707 bits (169), Expect = 2.821e-13
Identity = 37/46 (80.43%), Postives = 39/46 (84.78%), Query Frame = 1 
Query:    1 VQLSLSLFCIDSYERLAAE----GMIASDASASSLMFLCNPINV*F 126
            VQLSLSLFC+DSYERLAA     G +ASDASASSLMFLCNPINV F
Sbjct:  123 VQLSLSLFCVDSYERLAAAAAGGGKVASDASASSLMFLCNPINVSF 168
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BLAST of EX568965 vs. Soybean peptides
Match: Glyma02g47500.1|PACid:16250517 ()

HSP 1 Score: 63.1586 bits (152), Expect = 6.060e-11
Identity = 33/40 (82.50%), Postives = 35/40 (87.50%), Query Frame = 1 
Query:    1 VQLSLSLFCIDSYERLAAEGMIASDASASSLMFLCNPINV 120
            VQLSLSLFCIDSYERL + G I SDASASSLMFLCN +NV
Sbjct:  116 VQLSLSLFCIDSYERLGS-GRIPSDASASSLMFLCNSVNV 154
[Close]
BLAST of EX568965 vs. Soybean peptides
Match: Glyma14g01260.1|PACid:16293948 ()

HSP 1 Score: 62.7734 bits (151), Expect = 7.914e-11
Identity = 33/40 (82.50%), Postives = 35/40 (87.50%), Query Frame = 1 
Query:    1 VQLSLSLFCIDSYERLAAEGMIASDASASSLMFLCNPINV 120
            VQLSLSLFCIDSYERL + G I SDASASSLMFLCN +NV
Sbjct:  116 VQLSLSLFCIDSYERLES-GRIPSDASASSLMFLCNTVNV 154
[Close]
BLAST of EX568965 vs. Medicago proteins
Match: IMGA|Medtr5g097150.1 (F-box protein SNE (AHRD V1 ***- Q9LUB6); contains Interpro domain(s) IPR001810 Cyclin-like F-box chr05_pseudomolecule_IMGAG_V3.5 41494693-41495271 E EGN_Mt100125 20100825)

HSP 1 Score: 68.9366 bits (167), Expect = 6.979e-13
Identity = 35/40 (87.50%), Postives = 38/40 (95.00%), Query Frame = 1 
Query:    1 VQLSLSLFCIDSYERLAAEGMIASDASASSLMFLCNPINV 120
            VQLSLSLFCIDSYERLA  GM+ASDA+ASSL+FLCNPINV
Sbjct:  128 VQLSLSLFCIDSYERLAG-GMVASDAAASSLIFLCNPINV 166
The following BLAST results are available for this feature:
BLAST of EX568965 vs. Lotus protein
Analysis Date: 2011-04-21 (Homology Analysis: Pisum sativum unigene v2 vs Lotus proteins)
Total hits: 1
Match NameE-valueIdentityDescription
chr2.CM0191.90.r2.m2.821e-1380.43+ phase: 0 [more]
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BLAST of EX568965 vs. Soybean peptides
Analysis Date: 2011-04-21 (Homology Analysis: Pisum sativum unigene v2 vs Soybean peptides)
Total hits: 2
Match NameE-valueIdentityDescription
Glyma02g47500.1|PACid:162505176.060e-1182.50[more]
Glyma14g01260.1|PACid:162939487.914e-1182.50[more]
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BLAST of EX568965 vs. Medicago proteins
Analysis Date: 2011-04-21 (Homology Analysis: Pisum sativum unigene v2 vs Medicago proteins)
Total hits: 1
Match NameE-valueIdentityDescription
IMGA|Medtr5g097150.16.979e-1387.50F-box protein SNE (AHRD V1 ***- Q9LUB6); contains ... [more]
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Properties
Property NameValue
Singlet in analysisPisum sativum unigene v2
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>EX568965 ID=EX568965; Name=EX568965; organism=Pisum sativum; type=EST; length=138bp
GTTCAGCTTTCGCTTTCTTTGTTTTGTATTGATAGTTACGAGAGACTTGC
TGCTGAGGGAATGATTGCCAGTGACGCGTCTGCATCGTCGCTCATGTTCC
TCTGTAACCCTATCAACGTCTGATTCTTATTTATTGAT
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