EX570072

EST Overview
NameEX570072
Unique NameEX570072
TypeEST
OrganismPisum sativum (pea)
Sequence length283
Libraries
Library NameType
LIBEST_021973 Pisum sativum shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs Swissprot2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
Homology
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BLAST of EX570072 vs. TrEMBL
Match: B9RTJ1_RICCO (Eukaryotic translation initiation factor 2c, putative OS=Ricinus communis GN=RCOM_0910940 PE=4 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 6.561e-8
Identity = 31/49 (63.27%), Postives = 34/49 (69.39%), Query Frame = 3 
Query:    3 PEMQEKGSTADDGNSSHSPKGTTTRAAGECGVKPLPALKDNVKRVMFYC 149
            PEMQ+ GST   G          TRAAGE GV+PLPALK+NVKRVMFYC
Sbjct:  948 PEMQDNGSTGTRG----------TRAAGETGVRPLPALKENVKRVMFYC 986
[Close]
BLAST of EX570072 vs. TrEMBL
Match: B9HKB5_POPTR (Argonaute protein group OS=Populus trichocarpa GN=AGO906 PE=4 SV=1)

HSP 1 Score: 56.9954 bits (136), Expect = 7.254e-7
Identity = 30/49 (61.22%), Postives = 33/49 (67.35%), Query Frame = 3 
Query:    3 PEMQEKGSTADDGNSSHSPKGTTTRAAGECGVKPLPALKDNVKRVMFYC 149
            P MQE GS      + H  KGT T   GE GV+PLPALK+NVKRVMFYC
Sbjct:  953 PVMQENGSAGS--GACHGAKGTRT---GESGVRPLPALKENVKRVMFYC 996
[Close]
BLAST of EX570072 vs. SwissProt
Match: PINH_ARATH (Protein PINHEAD OS=Arabidopsis thaliana GN=At5g43810 PE=2 SV=1)

HSP 1 Score: 53.1434 bits (126), Expect = 5.045e-7
Identity = 24/36 (66.67%), Postives = 26/36 (72.22%), Query Frame = 3 
Query:   42 NSSHSPKGTTTRAAGECGVKPLPALKDNVKRVMFYC 149
            N S   K T T   G+ GVKPLPALK+NVKRVMFYC
Sbjct:  953 NGSPGKKNTKTTTVGDVGVKPLPALKENVKRVMFYC 988
[Close]
BLAST of EX570072 vs. TAIR peptide
Match: AT5G43810.2 (| Symbols: ZLL | Stabilizer of iron transporter SufD / Polynucleotidyl transferase | chr5:17611939-17616562 FORWARD LENGTH=988)

HSP 1 Score: 53.1434 bits (126), Expect = 3.957e-8
Identity = 24/36 (66.67%), Postives = 26/36 (72.22%), Query Frame = 3 
Query:   42 NSSHSPKGTTTRAAGECGVKPLPALKDNVKRVMFYC 149
            N S   K T T   G+ GVKPLPALK+NVKRVMFYC
Sbjct:  953 NGSPGKKNTKTTTVGDVGVKPLPALKENVKRVMFYC 988
[Close]
BLAST of EX570072 vs. TAIR peptide
Match: AT5G43810.1 (| Symbols: ZLL, PNH, AGO10 | Stabilizer of iron transporter SufD / Polynucleotidyl transferase | chr5:17611939-17616562 FORWARD LENGTH=988)

HSP 1 Score: 53.1434 bits (126), Expect = 3.957e-8
Identity = 24/36 (66.67%), Postives = 26/36 (72.22%), Query Frame = 3 
Query:   42 NSSHSPKGTTTRAAGECGVKPLPALKDNVKRVMFYC 149
            N S   K T T   G+ GVKPLPALK+NVKRVMFYC
Sbjct:  953 NGSPGKKNTKTTTVGDVGVKPLPALKENVKRVMFYC 988
The following BLAST results are available for this feature:
BLAST of EX570072 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 2
Match NameE-valueIdentityDescription
B9RTJ1_RICCO6.561e-863.27Eukaryotic translation initiation factor 2c, putat... [more]
B9HKB5_POPTR7.254e-761.22Argonaute protein group OS=Populus trichocarpa GN=... [more]
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BLAST of EX570072 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
PINH_ARATH5.045e-766.67Protein PINHEAD OS=Arabidopsis thaliana GN=At5g438... [more]
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BLAST of EX570072 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT5G43810.23.957e-866.67| Symbols: ZLL | Stabilizer of iron transporter Su... [more]
AT5G43810.13.957e-866.67| Symbols: ZLL, PNH, AGO10 | Stabilizer of iron tr... [more]
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Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>EX570072 ID=EX570072; Name=EX570072; organism=Pisum sativum; type=EST; length=283bp
AACCAGAGATGCAAGAGAAAGGCTCTACAGCGGATGATGGCAATTCTAGC
CATAGTCCCAAAGGAACAACAACACGAGCAGCTGGAGAATGTGGTGTGAA
GCCATTACCAGCTTTGAAAGATAATGTTAAGAGAGTGATGTTTTACTGTT
AGACTCCTTTAGAGTTACATTGTACAAAAAAGTATTCTATGTTAATCTTC
ATTGTAGAAATTTCTTCTGAAAAGCCTTTACAACCATGATTAATCTGCAG
CATAGCTGGAAAGAAAATGAATCAAGTAATTGT
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