EX571268
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EX571268 vs. TrEMBL
Match: O04239_VICFA (Transcripteion factor (Fragment) OS=Vicia faba var. minor PE=2 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 2.036e-33 Identity = 73/79 (92.41%), Postives = 76/79 (96.20%), Query Frame = 3 Query: 3 RRSKSESENVFTAKGIRRSKSESEKMSDSFVDESITKTVIRGIVLEDGSTCRKEPVKGRKRCHEHKGKRIRASVSINQK 239 RRSKSESENVFTAK IRRSKSESEK+S+S VDESITKTVI GIVLEDGSTCRKEPVKGRKRCHEHKGKR+RASVSINQK Sbjct: 299 RRSKSESENVFTAKEIRRSKSESEKVSESLVDESITKTVICGIVLEDGSTCRKEPVKGRKRCHEHKGKRVRASVSINQK 377
BLAST of EX571268 vs. TrEMBL
Match: Q2HW60_MEDTR (Excinuclease ABC, C subunit, N-terminal, putative OS=Medicago truncatula GN=MtrDRAFT_AC147961g30v2 PE=4 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 8.894e-13 Identity = 40/80 (50.00%), Postives = 54/80 (67.50%), Query Frame = 3 Query: 3 RRSKSESENVFTAKGIRRSKSESEKMSDS-------FVDESITKTVIRGIVLEDGSTCRKEPVKGRKRCHEHKGKRIRAS 221 R KSE E++ + R ++ S + D V+E ITKT+I GI+L+DGSTCR++PVKGRKRC EHKG+RIRA+ Sbjct: 364 RSPKSELESI--VRNAYRYQNASHDVEDPPQRTVKCHVEEGITKTIICGIILDDGSTCRRQPVKGRKRCQEHKGRRIRAN 441
BLAST of EX571268 vs. TrEMBL
Match: Q9SZI8_ARATH (Putative transcription factor (Fragment) OS=Arabidopsis thaliana GN=F20B18.280 PE=2 SV=1) HSP 1 Score: 58.5362 bits (140), Expect = 2.506e-7 Identity = 32/69 (46.38%), Postives = 44/69 (63.77%), Query Frame = 3 Query: 15 SESENVFTAKGIRRSKSESEKMS---DSFVDESITKTVIRGIVLEDGSTCRKEPVKGRKRCHEHKGKRI 212 +E E+ +R S+S + +S D VDES + + G++LEDG+TC PVKGRKRC EHKGKR+ Sbjct: 111 AEKESNSLPSILRLSRSRPQPVSEKHDDIVDESDSASAC-GVLLEDGTTCTTTPVKGRKRCTEHKGKRL 178
BLAST of EX571268 vs. TrEMBL
Match: Q9FJT5_ARATH (Similarity to transcription repressor OS=Arabidopsis thaliana GN=At5g56780 PE=4 SV=1) HSP 1 Score: 57.3806 bits (137), Expect = 5.584e-7 Identity = 29/67 (43.28%), Postives = 43/67 (64.18%), Query Frame = 3 Query: 18 ESENVFTAKGIRRSKSESEKMSDSF--VDESITKTVIRGIVLEDGSTCRKEPVKGRKRCHEHKGKRI 212 E N F ++ ++S + +SD F VD S + ++ G++LEDG C + PVKGRKRC EHKG+R+ Sbjct: 247 EKSNNFLTSILKLTRSRPQPVSDRFDEVDGSCSD-IVCGVLLEDGGCCIRSPVKGRKRCIEHKGQRV 312
BLAST of EX571268 vs. TrEMBL
Match: D7MFC2_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_913945 PE=4 SV=1) HSP 1 Score: 56.9954 bits (136), Expect = 7.293e-7 Identity = 29/58 (50.00%), Postives = 40/58 (68.97%), Query Frame = 3 Query: 48 IRRSKSESEKMSD---SFVDESITKTVIRGIVLEDGSTCRKEPVKGRKRCHEHKGKRI 212 +R S+S + +SD VD S + +V G++LEDG+TC P+KGRKRC EHKGKR+ Sbjct: 177 LRLSRSRPQPVSDRHDDIVDGSDSASVC-GVLLEDGTTCSTTPIKGRKRCSEHKGKRL 233
BLAST of EX571268 vs. TAIR peptide
Match: AT4G26170.1 (| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: effector of transcription2 (TAIR:AT5G56780.1); Has 75 Blast hits to 42 proteins in 17 species: Archae - 0; Bacteria - 2; Metazoa - 2; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). | chr4:13256930-13259382 FORWARD LENGTH=506) HSP 1 Score: 58.5362 bits (140), Expect = 1.502e-9 Identity = 32/69 (46.38%), Postives = 44/69 (63.77%), Query Frame = 3 Query: 15 SESENVFTAKGIRRSKSESEKMS---DSFVDESITKTVIRGIVLEDGSTCRKEPVKGRKRCHEHKGKRI 212 +E E+ +R S+S + +S D VDES + + G++LEDG+TC PVKGRKRC EHKGKR+ Sbjct: 268 AEKESNSLPSILRLSRSRPQPVSEKHDDIVDESDSASAC-GVLLEDGTTCTTTPVKGRKRCTEHKGKRL 335 HSP 2 Score: 50.0618 bits (118), Expect = 5.341e-7 Identity = 24/44 (54.55%), Postives = 26/44 (59.09%), Query Frame = 3 Query: 81 SDSFVDESITKTVIRGIVLEDGSTCRKEPVKGRKRCHEHKGKRI 212 S V + VI G L +GS C K PVKGRKRC EHKG RI Sbjct: 461 SSENVQSATASQVICGFKLYNGSVCEKSPVKGRKRCEEHKGMRI 504
BLAST of EX571268 vs. TAIR peptide
Match: AT5G56780.1 (| Symbols: ATET2, ET2 | effector of transcription2 | chr5:22964384-22966241 REVERSE LENGTH=483) HSP 1 Score: 57.3806 bits (137), Expect = 3.345e-9 Identity = 29/67 (43.28%), Postives = 43/67 (64.18%), Query Frame = 3 Query: 18 ESENVFTAKGIRRSKSESEKMSDSF--VDESITKTVIRGIVLEDGSTCRKEPVKGRKRCHEHKGKRI 212 E N F ++ ++S + +SD F VD S + ++ G++LEDG C + PVKGRKRC EHKG+R+ Sbjct: 242 EKSNNFLTSILKLTRSRPQPVSDRFDEVDGSCSD-IVCGVLLEDGGCCIRSPVKGRKRCIEHKGQRV 307 HSP 2 Score: 49.6766 bits (117), Expect = 6.976e-7 Identity = 26/61 (42.62%), Postives = 31/61 (50.82%), Query Frame = 3 Query: 42 KGIRRSKSESEKMSDS----FVDESITKTVIRGIVLEDGSTCRKEPVKGRKRCHEHKGKRI 212 KG +R EK S + K V G+ L +G C + PVKGRKRC EHKG RI Sbjct: 422 KGSKRCWQHKEKTSSDTSPVYFQPEAAKNVACGVKLGNGLICERSPVKGRKRCEEHKGMRI 482
BLAST of EX571268 vs. TAIR peptide
Match: AT4G26170.1 (| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: effector of transcription2 (TAIR:AT5G56780.1); Has 75 Blast hits to 42 proteins in 17 species: Archae - 0; Bacteria - 2; Metazoa - 2; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). | chr4:13256930-13259382 FORWARD LENGTH=506) HSP 1 Score: 58.5362 bits (140), Expect = 1.502e-9 Identity = 32/69 (46.38%), Postives = 44/69 (63.77%), Query Frame = 3 Query: 15 SESENVFTAKGIRRSKSESEKMS---DSFVDESITKTVIRGIVLEDGSTCRKEPVKGRKRCHEHKGKRI 212 +E E+ +R S+S + +S D VDES + + G++LEDG+TC PVKGRKRC EHKGKR+ Sbjct: 268 AEKESNSLPSILRLSRSRPQPVSEKHDDIVDESDSASAC-GVLLEDGTTCTTTPVKGRKRCTEHKGKRL 335 HSP 2 Score: 50.0618 bits (118), Expect = 5.341e-7 Identity = 24/44 (54.55%), Postives = 26/44 (59.09%), Query Frame = 3 Query: 81 SDSFVDESITKTVIRGIVLEDGSTCRKEPVKGRKRCHEHKGKRI 212 S V + VI G L +GS C K PVKGRKRC EHKG RI Sbjct: 461 SSENVQSATASQVICGFKLYNGSVCEKSPVKGRKRCEEHKGMRI 504
BLAST of EX571268 vs. TAIR peptide
Match: AT5G56780.1 (| Symbols: ATET2, ET2 | effector of transcription2 | chr5:22964384-22966241 REVERSE LENGTH=483) HSP 1 Score: 57.3806 bits (137), Expect = 3.345e-9 Identity = 29/67 (43.28%), Postives = 43/67 (64.18%), Query Frame = 3 Query: 18 ESENVFTAKGIRRSKSESEKMSDSF--VDESITKTVIRGIVLEDGSTCRKEPVKGRKRCHEHKGKRI 212 E N F ++ ++S + +SD F VD S + ++ G++LEDG C + PVKGRKRC EHKG+R+ Sbjct: 242 EKSNNFLTSILKLTRSRPQPVSDRFDEVDGSCSD-IVCGVLLEDGGCCIRSPVKGRKRCIEHKGQRV 307 HSP 2 Score: 49.6766 bits (117), Expect = 6.976e-7 Identity = 26/61 (42.62%), Postives = 31/61 (50.82%), Query Frame = 3 Query: 42 KGIRRSKSESEKMSDS----FVDESITKTVIRGIVLEDGSTCRKEPVKGRKRCHEHKGKRI 212 KG +R EK S + K V G+ L +G C + PVKGRKRC EHKG RI Sbjct: 422 KGSKRCWQHKEKTSSDTSPVYFQPEAAKNVACGVKLGNGLICERSPVKGRKRCEEHKGMRI 482
BLAST of EX571268 vs. TrEMBL
Match: O04239_VICFA (Transcripteion factor (Fragment) OS=Vicia faba var. minor PE=2 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 2.546e-33 Identity = 73/79 (92.41%), Postives = 76/79 (96.20%), Query Frame = 3 Query: 3 RRSKSESENVFTAKGIRRSKSESEKMSDSFVDESITKTVIRGIVLEDGSTCRKEPVKGRKRCHEHKGKRIRASVSINQK 239 RRSKSESENVFTAK IRRSKSESEK+S+S VDESITKTVI GIVLEDGSTCRKEPVKGRKRCHEHKGKR+RASVSINQK Sbjct: 299 RRSKSESENVFTAKEIRRSKSESEKVSESLVDESITKTVICGIVLEDGSTCRKEPVKGRKRCHEHKGKRVRASVSINQK 377
BLAST of EX571268 vs. TrEMBL
Match: Q2HW60_MEDTR (Excinuclease ABC, C subunit, N-terminal, putative OS=Medicago truncatula GN=MtrDRAFT_AC147961g30v2 PE=4 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 1.112e-12 Identity = 40/80 (50.00%), Postives = 54/80 (67.50%), Query Frame = 3 Query: 3 RRSKSESENVFTAKGIRRSKSESEKMSDS-------FVDESITKTVIRGIVLEDGSTCRKEPVKGRKRCHEHKGKRIRAS 221 R KSE E++ + R ++ S + D V+E ITKT+I GI+L+DGSTCR++PVKGRKRC EHKG+RIRA+ Sbjct: 364 RSPKSELESI--VRNAYRYQNASHDVEDPPQRTVKCHVEEGITKTIICGIILDDGSTCRRQPVKGRKRCQEHKGRRIRAN 441
BLAST of EX571268 vs. TrEMBL
Match: Q9SZI8_ARATH (Putative transcription factor (Fragment) OS=Arabidopsis thaliana GN=F20B18.280 PE=2 SV=1) HSP 1 Score: 58.5362 bits (140), Expect = 3.134e-7 Identity = 32/69 (46.38%), Postives = 44/69 (63.77%), Query Frame = 3 Query: 15 SESENVFTAKGIRRSKSESEKMS---DSFVDESITKTVIRGIVLEDGSTCRKEPVKGRKRCHEHKGKRI 212 +E E+ +R S+S + +S D VDES + + G++LEDG+TC PVKGRKRC EHKGKR+ Sbjct: 111 AEKESNSLPSILRLSRSRPQPVSEKHDDIVDESDSASAC-GVLLEDGTTCTTTPVKGRKRCTEHKGKRL 178
BLAST of EX571268 vs. TrEMBL
Match: Q9FJT5_ARATH (Similarity to transcription repressor OS=Arabidopsis thaliana GN=At5g56780 PE=4 SV=1) HSP 1 Score: 57.3806 bits (137), Expect = 6.982e-7 Identity = 29/67 (43.28%), Postives = 43/67 (64.18%), Query Frame = 3 Query: 18 ESENVFTAKGIRRSKSESEKMSDSF--VDESITKTVIRGIVLEDGSTCRKEPVKGRKRCHEHKGKRI 212 E N F ++ ++S + +SD F VD S + ++ G++LEDG C + PVKGRKRC EHKG+R+ Sbjct: 247 EKSNNFLTSILKLTRSRPQPVSDRFDEVDGSCSD-IVCGVLLEDGGCCIRSPVKGRKRCIEHKGQRV 312
BLAST of EX571268 vs. TrEMBL
Match: D7MFC2_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_913945 PE=4 SV=1) HSP 1 Score: 56.9954 bits (136), Expect = 9.119e-7 Identity = 29/58 (50.00%), Postives = 40/58 (68.97%), Query Frame = 3 Query: 48 IRRSKSESEKMSD---SFVDESITKTVIRGIVLEDGSTCRKEPVKGRKRCHEHKGKRI 212 +R S+S + +SD VD S + +V G++LEDG+TC P+KGRKRC EHKGKR+ Sbjct: 177 LRLSRSRPQPVSDRHDDIVDGSDSASVC-GVLLEDGTTCSTTPIKGRKRCSEHKGKRL 233
BLAST of EX571268 vs. Lotus protein
Match: chr2.CM0373.300.r2.d (- phase: 0 /partial) HSP 1 Score: 73.559 bits (179), Expect = 2.742e-14 Identity = 35/60 (58.33%), Postives = 44/60 (73.33%), Query Frame = 3 Query: 60 KSESEKMSDSFVDESITKTVIRGIVLEDGSTCRKEPVKGRKRCHEHKGKRIRASVSINQK 239 K + + S V E I T I GI+L+DGSTCR++PVKGRKRC EHKG+RIRAS +NQ+ Sbjct: 135 KDPPQALVGSPVGEIINNTNICGIILDDGSTCRRQPVKGRKRCLEHKGRRIRASFHVNQR 194 HSP 2 Score: 64.3142 bits (155), Expect = 1.664e-11 Identity = 38/88 (43.18%), Postives = 49/88 (55.68%), Query Frame = 3 Query: 12 KSESENVFTAKGIRRSKSES----------------EKMSDSFVDESITKTVIRGIVLEDGSTCRKEPVKGRKRCHEHKGKRIRASVS 227 K NV TAK I+ +S+S + + + VDE IT+T I GIVL++G CR+EPVKGRKRC EHKG R S + Sbjct: 13 KGMRTNVSTAKAIKAPESKSVSYRYQNASHDIKDPPQTLVERPVDEIITQTNICGIVLDNGFPCRREPVKGRKRCQEHKGMRRNVSTA 100
BLAST of EX571268 vs. Soybean peptides
Match: Glyma07g15450.1|PACid:16267373 () HSP 1 Score: 79.337 bits (194), Expect = 1.198e-15 Identity = 50/93 (53.76%), Postives = 60/93 (64.52%), Query Frame = 3 Query: 12 KSESENVFTAKGIRRSK-SESEKMSD---SFVDESITKT-VIRGIVLEDGSTCRKEPVKGRKRCHEHKGKRIRASVSINQKK*G*KYLHKPEN 275 K NV TAK I + SES + D + VDES+T T I GI+L DGSTC ++PVKGRKRCHEHKG+RIRA+ SI K G KY + N Sbjct: 276 KGMRTNVSTAKAIIGAPMSESHDLEDPPQTVVDESLTNTDYICGILLSDGSTCTRQPVKGRKRCHEHKGRRIRAA-SIQTKDNGYKYQNNVSN 367 HSP 2 Score: 79.337 bits (194), Expect = 1.198e-15 Identity = 38/60 (63.33%), Postives = 44/60 (73.33%), Query Frame = 3 Query: 63 SESEKMSDSFVDESITKTVIRGIVLEDGSTCRKEPVKGRKRCHEHKGKRIRASVSINQKK 242 ++ E + VDESIT T I GI+L DGSTC + PVKGRKRCHEHKG+RIRAS I KK Sbjct: 367 NDVEDPPQTLVDESITNTNICGIILNDGSTCTRHPVKGRKRCHEHKGRRIRASFHIANKK 426
BLAST of EX571268 vs. Medicago proteins
Match: IMGA|Medtr6g092520.1 (Transcripteion factor (Fragment) (AHRD V1 ***- O04239_VICFA) chr06_pseudomolecule_IMGAG_V3.5 23062577-23060783 H EGN_Mt100125 20100825) HSP 1 Score: 87.8113 bits (216), Expect = 2.048e-18 Identity = 45/80 (56.25%), Postives = 59/80 (73.75%), Query Frame = 3 Query: 3 RRSKSESE--NVFTAKGIRRSKSE-SEKMSDSFVDESITKTVIRGIVLEDGSTCRKEPVKGRKRCHEHKGKRIRASVSIN 233 R +KSES+ N + I+ + + + +S VDESITKT+ GI+LEDG+TCR++PVKGRKRCH+HKGKRIRA V IN Sbjct: 289 RTAKSESKRGNACRYQNIKHDVEDLPQTVVESLVDESITKTITCGIILEDGTTCRRQPVKGRKRCHDHKGKRIRAFVPIN 368 HSP 2 Score: 52.7582 bits (125), Expect = 7.301e-8 Identity = 26/69 (37.68%), Postives = 41/69 (59.42%), Query Frame = 3 Query: 33 FTAKGIRRSKSESEKMSDSFVDESITKTVIRGIVLEDGSTCRKEPVKGRKRCHEHKGKRIRASVSINQK 239 F ++ + ++S + + D K I G++L+DGS C K PV+ R RCHEHKG RIR + S +++ Sbjct: 229 FLSRVFKFNRSRPKIVQDKADFSVEKKDKICGVILDDGSICTKTPVEKRVRCHEHKGMRIRTAKSESKR 297
BLAST of EX571268 vs. Medicago proteins
Match: IMGA|Medtr7g090060.1 (Unknown Protein (AHRD V1) chr07_pseudomolecule_IMGAG_V3.5 28131103-28134892 E EGN_Mt100125 20100825) HSP 1 Score: 76.6406 bits (187), Expect = 4.721e-15 Identity = 40/80 (50.00%), Postives = 54/80 (67.50%), Query Frame = 3 Query: 3 RRSKSESENVFTAKGIRRSKSESEKMSDS-------FVDESITKTVIRGIVLEDGSTCRKEPVKGRKRCHEHKGKRIRAS 221 R KSE E++ + R ++ S + D V+E ITKT+I GI+L+DGSTCR++PVKGRKRC EHKG+RIRA+ Sbjct: 364 RSPKSELESI--VRNAYRYQNASHDVEDPPQRTVKCHVEEGITKTIICGIILDDGSTCRRQPVKGRKRCQEHKGRRIRAN 441 The following BLAST results are available for this feature:
BLAST of EX571268 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl) Total hits: 5
BLAST of EX571268 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide) Total hits: 2
BLAST of EX571268 vs. TAIR peptide
Analysis Date: 2011-04-21 (Homology Analysis: Pisum sativum unigene v2 vs TAIR 10 peptide) Total hits: 2
BLAST of EX571268 vs. TrEMBL
Analysis Date: 2011-04-27 (Homology Analysis: Pisum sativum unigene v2 vs Trembl) Total hits: 5
BLAST of EX571268 vs. Lotus protein
Analysis Date: 2011-04-21 (Homology Analysis: Pisum sativum unigene v2 vs Lotus proteins) Total hits: 1
BLAST of EX571268 vs. Soybean peptides
Analysis Date: 2011-04-21 (Homology Analysis: Pisum sativum unigene v2 vs Soybean peptides) Total hits: 1
BLAST of EX571268 vs. Medicago proteins
Analysis Date: 2011-04-21 (Homology Analysis: Pisum sativum unigene v2 vs Medicago proteins) Total hits: 2
InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v2
Date Performed: 2011-04-27
Analysis Name: InterProScan analysis for Pisum sativum unigene v1 Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EX571268 ID=EX571268; Name=EX571268; organism=Pisum sativum; type=EST; length=423bpback to top |