FG529338

EST Overview
NameFG529338
Unique NameFG529338
TypeEST
OrganismPisum sativum (pea)
Sequence length480
Libraries
Library NameType
LIBEST_023217 MeriP Pisum sativum Shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
InterProScan analysis for Pisum sativum unigene v12010-12-29
Homology
BLAST of FG529338 vs. TrEMBL
Match: C6T1A6_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 6.197e-11
Identity = 36/77 (46.75%), Postives = 48/77 (62.34%), Query Frame = 2
Query:    2 RKLFKQWRREQKNALESGIVSMEDVQMAVAKGETKDSTAXXXXXXXXXXXXXXXXXXXXXXXXXXXDVPAAEISADA 232
            RKLFK+WRR+QK+AL++G+V+MEDVQMAVA+G+TKD+                             DVPAA++SADA
Sbjct:   46 RKLFKKWRRDQKDALQNGLVAMEDVQMAVAEGDTKDAPRPSAKIHLKKKTLKLKQLKRKGKNKRKSDVPAADVSADA 122          
BLAST of FG529338 vs. TrEMBL
Match: C6T235_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 1.094e-7
Identity = 35/78 (44.87%), Postives = 47/78 (60.26%), Query Frame = 2
Query:    2 RKLFKQWRREQKNALESGIVSMEDVQMAVAK-GETKDSTAXXXXXXXXXXXXXXXXXXXXXXXXXXXDVPAAEISADA 232
            RKLFK+WRR+QK+AL++G+V+MEDVQMAVA+ G+TKD+                             DVP A++SADA
Sbjct:   46 RKLFKKWRRDQKDALQNGLVTMEDVQMAVAEAGDTKDTPRPSPKIHLKKKALKLKQLKRKGKNKRKSDVP-ADVSADA 122          
BLAST of FG529338 vs. TrEMBL
Match: D7T7Q8_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_39.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00024412001 PE=4 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 2.437e-7
Identity = 26/37 (70.27%), Postives = 34/37 (91.89%), Query Frame = 2
Query:    2 RKLFKQWRREQKNALESGIVSMEDVQMAVAKGETKDS 112
            RKLFK+WRREQK ALE GIVSMEDV+MAV++G ++++
Sbjct:   46 RKLFKRWRREQKEALEKGIVSMEDVEMAVSQGTSEET 82          
BLAST of FG529338 vs. TAIR peptide
Match: AT1G08580.1 (| Symbols: | unknown protein; Has 39 Blast hits to 39 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). | chr1:2715296-2716351 REVERSE LENGTH=123)

HSP 1 Score: 49.6766 bits (117), Expect = 6.844e-8
Identity = 21/37 (56.76%), Postives = 31/37 (83.78%), Query Frame = 2
Query:    2 RKLFKQWRREQKNALESGIVSMEDVQMAVAKGETKDS 112
            RKL ++WRREQK+ +E G+V+MEDV+MA A+  ++DS
Sbjct:   46 RKLLRKWRREQKDMVEKGLVTMEDVEMASAQAASEDS 82          

HSP 2 Score: 23.483 bits (49), Expect = 6.844e-8
Identity = 11/22 (50.00%), Postives = 15/22 (68.18%), Query Frame = 3
Query:  132 KFT*KRV*NLNSLSAKGKTKEN 197
            KF+ K+   LN L+ KGK K+N
Sbjct:   88 KFSVKKSLKLNKLNNKGKKKKN 109          
The following BLAST results are available for this feature:
BLAST of FG529338 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 3
Match NameE-valueIdentityDescription
C6T1A6_SOYBN6.197e-1146.75Putative uncharacterized protein OS=Glycine max PE... [more]
C6T235_SOYBN1.094e-744.87Putative uncharacterized protein OS=Glycine max PE... [more]
D7T7Q8_VITVI2.437e-770.27Whole genome shotgun sequence of line PN40024, sca... [more]
back to top
BLAST of FG529338 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT1G08580.16.844e-856.76| Symbols: | unknown protein; Has 39 Blast hits t... [more]
back to top
InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 40..66
score
NoneNo IPR availableSEGsegsegcoord: 21..33
score

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FG529338 ID=FG529338; Name=FG529338; organism=Pisum sativum; type=EST; length=480bp
GCGCAAGCTCTTCAAACAATGGCGTCGGGAACAAAAGAATGCCTTAGAAA
GTGGCATAGTAAGCATGGAAGATGTGCAAATGGCTGTTGCAAAAGGGGAA
ACCAAAGATAGCACTGCTTCATCTTCAGGAAAAATTCACTTGAAAAAGGG
TTTGAAACTTAAACAGCTTAAGCGCAAAGGGAAAAACAAAAGAAAATCTG
ATGTACCAGCTGCCGAAATATCAGCTGATGCAAATGCAATGATGGAATAA
TTTTTGTGCGTCTGCTGGGTAGGTATAGGTTGATAGAAAAGACAAATTTG
ATGGCATTATGTTGTAAACTTGAACTGAGTGATTAGTAGGTTTTCTTAAT
ATTTTCCTATTTTACTTTTGTATGGTAAAAGAATGGAAGCTTTGATTGAA
TAGTTTGAGTTGTTCAATTGCTGTCCTTAGAAGGAATGTCATATATTCGA
ACAACTAACCTCTGCAAGTTATGTTTTTTT
back to top