FG530707

EST Overview
NameFG530707
Unique NameFG530707
TypeEST
OrganismPisum sativum (pea)
Sequence length456
Libraries
Library NameType
LIBEST_023217 MeriP Pisum sativum Shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Homology
BLAST of FG530707 vs. TrEMBL
Match: C6TN59_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.528e-17
Identity = 43/51 (84.31%), Postives = 49/51 (96.08%), Query Frame = 1
Query:    1 QHKGKYRKFLPVAEGTGIGSLEREQTEKILNKIMSKNNHDILNVNKAVTVH 153
            +H+GKYRKFLPV EGTGIGSLEREQTEKILNKI+SKN+H+ILNV KAVT+H
Sbjct:  193 KHEGKYRKFLPVVEGTGIGSLEREQTEKILNKIVSKNSHNILNVEKAVTMH 243          
BLAST of FG530707 vs. TrEMBL
Match: D7U817_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_48.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00027422001 PE=4 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 6.419e-16
Identity = 38/51 (74.51%), Postives = 49/51 (96.08%), Query Frame = 1
Query:    1 QHKGKYRKFLPVAEGTGIGSLEREQTEKILNKIMSKNNHDILNVNKAVTVH 153
            +HKGKYRKFLPV EGTGIGSLE++QTEKILNK++SKN+H+ILNV+KA+ ++
Sbjct:  233 KHKGKYRKFLPVVEGTGIGSLEKQQTEKILNKLISKNSHEILNVDKAINMY 283          
BLAST of FG530707 vs. TrEMBL
Match: D7UCN0_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_46.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00027072001 PE=4 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 9.269e-15
Identity = 35/51 (68.63%), Postives = 48/51 (94.12%), Query Frame = 1
Query:    1 QHKGKYRKFLPVAEGTGIGSLEREQTEKILNKIMSKNNHDILNVNKAVTVH 153
            +HKGKYRKFLPV EGTGIGS E++QTEK+LN+++SKN+H+ILNV+KA+ ++
Sbjct:  233 KHKGKYRKFLPVVEGTGIGSQEKQQTEKVLNRLISKNSHEILNVDKAINMY 283          
BLAST of FG530707 vs. TrEMBL
Match: A5CBT4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_033191 PE=4 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 9.269e-15
Identity = 35/51 (68.63%), Postives = 48/51 (94.12%), Query Frame = 1
Query:    1 QHKGKYRKFLPVAEGTGIGSLEREQTEKILNKIMSKNNHDILNVNKAVTVH 153
            +HKGKYRKFLPV EGTGIGS E++QTEK+LN+++SKN+H+ILNV+KA+ ++
Sbjct:  232 KHKGKYRKFLPVVEGTGIGSQEKQQTEKVLNRLISKNSHEILNVDKAINMY 282          
BLAST of FG530707 vs. TrEMBL
Match: B8LLV5_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 3.297e-12
Identity = 33/50 (66.00%), Postives = 43/50 (86.00%), Query Frame = 1
Query:    1 QHKGKYRKFLPVAEGTGIGSLEREQTEKILNKIMSKNNHDILNVNKAVTV 150
            +H GK+RKFLPV EG+GIGS E++Q EK+L K++S +NHDILNV+KAV V
Sbjct:  239 KHPGKHRKFLPVVEGSGIGSREKQQCEKVLQKVLSSHNHDILNVDKAVKV 288          
BLAST of FG530707 vs. TrEMBL
Match: B9H4F0_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_206051 PE=4 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 5.623e-12
Identity = 31/51 (60.78%), Postives = 48/51 (94.12%), Query Frame = 1
Query:    1 QHKGKYRKFLPVAEGTGIGSLEREQTEKILNKIMSKNNHDILNVNKAVTVH 153
            +++GK+RKFLPV EG+GIGS E+EQT+++L+K++S N+H+ILNV+KAVT++
Sbjct:  228 KNQGKHRKFLPVVEGSGIGSQEKEQTDRVLSKLISSNSHEILNVDKAVTMY 278          
BLAST of FG530707 vs. TrEMBL
Match: B9SEQ5_RICCO (Ribosome biogenesis regulatory protein, putative OS=Ricinus communis GN=RCOM_0222510 PE=4 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.809e-10
Identity = 29/47 (61.70%), Postives = 43/47 (91.49%), Query Frame = 1
Query:    7 KGKYRKFLPVAEGTGIGSLEREQTEKILNKIMSKNNHDILNVNKAVT 147
            +GK+RKFLPV EG+G+G  EREQT+K+L+KI ++N+H+ILN++KAV+
Sbjct:  237 QGKHRKFLPVVEGSGMGRQEREQTDKVLSKIFAQNSHEILNIDKAVS 283          
BLAST of FG530707 vs. TrEMBL
Match: C5XMQ1_SORBI (Putative uncharacterized protein Sb03g003790 OS=Sorghum bicolor GN=Sb03g003790 PE=4 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.030e-10
Identity = 28/51 (54.90%), Postives = 44/51 (86.27%), Query Frame = 1
Query:    1 QHKGKYRKFLPVAEGTGIGSLEREQTEKILNKIMSKNNHDILNVNKAVTVH 153
            +H GK+RKFLPVAEG G+GSLE++Q +KILN ++++N+ + L+V KA+T++
Sbjct:  244 KHSGKHRKFLPVAEGKGMGSLEKQQNDKILNSLLARNSDEPLDVGKAITMY 294          
BLAST of FG530707 vs. TrEMBL
Match: B4FD87_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 1.531e-9
Identity = 27/51 (52.94%), Postives = 45/51 (88.24%), Query Frame = 1
Query:    1 QHKGKYRKFLPVAEGTGIGSLEREQTEKILNKIMSKNNHDILNVNKAVTVH 153
            +H GK+RKFLPVAEG G+GSLE++Q +KIL+ ++++N+ + L+V+KA+T++
Sbjct:  244 KHPGKHRKFLPVAEGKGMGSLEKQQNDKILSSLLARNSDEPLDVSKAITMY 294          
BLAST of FG530707 vs. TrEMBL
Match: Q7XPU3_ORYSJ (OSJNBa0088H09.13 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0088H09.13 PE=4 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 2.445e-7
Identity = 23/51 (45.10%), Postives = 42/51 (82.35%), Query Frame = 1
Query:    1 QHKGKYRKFLPVAEGTGIGSLEREQTEKILNKIMSKNNHDILNVNKAVTVH 153
            ++ GK+RKFLPV EG G+G+ E++Q +KILN +++K++ D ++V +A+T++
Sbjct:  244 KNPGKHRKFLPVVEGKGMGNQEKQQNDKILNALLAKSSEDQMDVGRAITMY 294          
BLAST of FG530707 vs. SwissProt
Match: RRS1_ARATH (Ribosome biogenesis regulatory protein homolog OS=Arabidopsis thaliana GN=At2g37990 PE=2 SV=2)

HSP 1 Score: 56.6102 bits (135), Expect = 5.805e-8
Identity = 24/49 (48.98%), Postives = 37/49 (75.51%), Query Frame = 1
Query:    7 KGKYRKFLPVAEGTGIGSLEREQTEKILNKIMSKNNHDILNVNKAVTVH 153
            +GK+ K+LPV  G G  + E+EQT  +L+KI SK++H+ILNV KA+ ++
Sbjct:  240 QGKHHKYLPVVSGRGDVNAEKEQTNNVLSKIFSKHSHEILNVGKAINMY 288          
BLAST of FG530707 vs. TAIR peptide
Match: AT2G37990.1 (| Symbols: | ribosome biogenesis regulatory protein (RRS1) family protein | chr2:15900713-15903028 FORWARD LENGTH=318)

HSP 1 Score: 56.6102 bits (135), Expect = 6.940e-9
Identity = 24/49 (48.98%), Postives = 37/49 (75.51%), Query Frame = 1
Query:    7 KGKYRKFLPVAEGTGIGSLEREQTEKILNKIMSKNNHDILNVNKAVTVH 153
            +GK+ K+LPV  G G  + E+EQT  +L+KI SK++H+ILNV KA+ ++
Sbjct:  240 QGKHHKYLPVVSGRGDVNAEKEQTNNVLSKIFSKHSHEILNVGKAINMY 288          
The following BLAST results are available for this feature:
BLAST of FG530707 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
C6TN59_SOYBN1.528e-1784.31Putative uncharacterized protein OS=Glycine max PE... [more]
D7U817_VITVI6.419e-1674.51Whole genome shotgun sequence of line PN40024, sca... [more]
D7UCN0_VITVI9.269e-1568.63Whole genome shotgun sequence of line PN40024, sca... [more]
A5CBT4_VITVI9.269e-1568.63Putative uncharacterized protein OS=Vitis vinifera... [more]
B8LLV5_PICSI3.297e-1266.00Putative uncharacterized protein OS=Picea sitchens... [more]
B9H4F0_POPTR5.623e-1260.78Predicted protein (Fragment) OS=Populus trichocarp... [more]
B9SEQ5_RICCO1.809e-1061.70Ribosome biogenesis regulatory protein, putative O... [more]
C5XMQ1_SORBI4.030e-1054.90Putative uncharacterized protein Sb03g003790 OS=So... [more]
B4FD87_MAIZE1.531e-952.94Putative uncharacterized protein OS=Zea mays PE=2 ... [more]
Q7XPU3_ORYSJ2.445e-745.10OSJNBa0088H09.13 protein OS=Oryza sativa subsp. ja... [more]
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BLAST of FG530707 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
RRS1_ARATH5.805e-848.98Ribosome biogenesis regulatory protein homolog OS=... [more]
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BLAST of FG530707 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT2G37990.16.940e-948.98| Symbols: | ribosome biogenesis regulatory prote... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 52..73
score: NAcoord: 76..91
score
NoneNo IPR availableSEGsegsegcoord: 38..45
score
NoneNo IPR availableSEGsegsegcoord: 4..23
score

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FG530707 ID=FG530707; Name=FG530707; organism=Pisum sativum; type=EST; length=456bp
CAACATAAAGGAAAATACCGAAAGTTCTTGCCGGTAGCAGAAGGAACAGG
GATCGGATCACTGGAGAGAGAGCAAACTGAAAAAATATTGAACAAGATCA
TGTCCAAGAATAACCACGATATACTCAACGTTAACAAGGCTGTCACAGTG
CACAATGTGAAGAAAGAAAAAAACAGGAAGAGTGATAAATCCAAGGTTTC
ATCAAGCAACAAATTGAAACCTCAGAAGAAGTCTTTTAAGAAGGGAAATG
CAAAGAAAGGCAACCCAAAAGCACAGTAATTTAGATTTTGTTGAAGCCGC
TTGTAGTTTTTTGGAAACACTTTTTAGTGGTTTAAAGTTTTGTAGACGAT
TATTTCACATGTCTATTGTTATCCATTTTTGCATGTTGCTTAAGCCATCA
GAACATCAGATATTTAATGTCATTATTATACAAGAAGTTAGTACTTGTAT
TATTAG
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