AM161863

EST Overview
NameAM161863
Unique NameAM161863
TypeEST
OrganismPisum sativum (pea)
Sequence length300
Libraries
Library NameType
LIBEST_019360 Pisum sativum leaf vegetativecdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Homology
BLAST of AM161863 vs. TrEMBL
Match: A5ASY5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_026646 PE=4 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 4.439e-9
Identity = 29/61 (47.54%), Postives = 39/61 (63.93%), Query Frame = 3
Query:  117 NQSHGIERRWVEAFDQSLASPERFTVASYNILADRNASQHSDLYVNTPSRYINWDRRKKIL 299
            +Q   I R W+++ D    S E FTV SYNIL DRNA +H DLY N P  Y+ WD R++++
Sbjct:   67 DQPPEIVRHWIDS-DHPFPSQETFTVVSYNILGDRNAFKHRDLYSNVPFSYMKWDHRRRVI 126          
BLAST of AM161863 vs. TrEMBL
Match: B9RE30_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1617470 PE=4 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 5.797e-9
Identity = 30/63 (47.62%), Postives = 40/63 (63.49%), Query Frame = 3
Query:  108 SYSNQSHGIERRWVEA-FDQSLASPERFTVASYNILADRNASQHSDLYVNTPSRYINWDRRKK 293
            S+   S  I R W ++ ++   + PE+FTV SYNILADRNAS+H DLY N    Y+ W  RK+
Sbjct:   63 SFDGPSPEIVRHWAQSDYNPFPSQPEQFTVVSYNILADRNASKHKDLYANVDPLYLKWAHRKR 125          
BLAST of AM161863 vs. TrEMBL
Match: D7SIW3_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_0.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00008252001 PE=4 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 1.687e-8
Identity = 28/61 (45.90%), Postives = 39/61 (63.93%), Query Frame = 3
Query:  117 NQSHGIERRWVEAFDQSLASPERFTVASYNILADRNASQHSDLYVNTPSRYINWDRRKKIL 299
            +Q   I R W+++ +    S E FTV SYNIL DRNA +H DLY N P  Y+ WD R++++
Sbjct:   67 DQPPEIVRHWIDS-NHPFPSQETFTVVSYNILGDRNAFKHRDLYSNVPFSYMKWDHRRRVI 126          
BLAST of AM161863 vs. TrEMBL
Match: B9T591_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0199720 PE=4 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 3.181e-7
Identity = 27/68 (39.71%), Postives = 41/68 (60.29%), Query Frame = 3
Query:   96 SNSNSYSNQSHGIERRWVEAFDQSLASPERFTVASYNILADRNASQHSDLYVNTPSRYINWDRRKKIL 299
            +N  S ++ +    RRWV + +   A  +R  V SYNIL   NAS H DLY   P ++++WDRRK+++
Sbjct:   62 NNYVSKNSSTAECNRRWVFSDNDFSAYKDRVVVVSYNILGVENASNHPDLYFKIPPKFLDWDRRKELI 129          
BLAST of AM161863 vs. TrEMBL
Match: Q5Z6P3_ORYSJ (Os06g0264900 protein OS=Oryza sativa subsp. japonica GN=OJ1001_B06.11 PE=4 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 9.255e-7
Identity = 26/61 (42.62%), Postives = 39/61 (63.93%), Query Frame = 3
Query:  120 QSHGI-ERRWVEAFDQSLASPERFTVASYNILADRNASQHSDLYVNTPSRYINWDRRKKIL 299
            Q +G+  RRWV A + S +  +  T+ SYNILAD NA  H DLY++ P   + WD R++++
Sbjct:   69 QQYGVPSRRWVLAEEASTSDGDACTIMSYNILADNNAHYHPDLYLDVPWDAMRWDSRRRLI 129          
BLAST of AM161863 vs. TrEMBL
Match: A2YBH3_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_22458 PE=4 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 9.255e-7
Identity = 26/61 (42.62%), Postives = 39/61 (63.93%), Query Frame = 3
Query:  120 QSHGI-ERRWVEAFDQSLASPERFTVASYNILADRNASQHSDLYVNTPSRYINWDRRKKIL 299
            Q +G+  RRWV A + S +  +  T+ SYNILAD NA  H DLY++ P   + WD R++++
Sbjct:   69 QQYGVPSRRWVLAEEASTSDGDACTIMSYNILADNNAHYHPDLYLDVPWDAMRWDSRRRLI 129          
BLAST of AM161863 vs. SwissProt
Match: CCR4E_ARATH (Carbon catabolite repressor protein 4 homolog 5 OS=Arabidopsis thaliana GN=CCR4-5 PE=2 SV=2)

HSP 1 Score: 52.7582 bits (125), Expect = 6.691e-7
Identity = 22/59 (37.29%), Postives = 34/59 (57.63%), Query Frame = 3
Query:  123 SHGIERRWVEAFDQSLASPERFTVASYNILADRNASQHSDLYVNTPSRYINWDRRKKIL 299
            S  +ER WV + +      ++  + SYN+L   NAS H DLY N P +++ W RRK ++
Sbjct:   79 SSSVEREWVFSANNFENLADKLVLVSYNLLGVDNASNHMDLYYNVPRKHLEWSRRKHLI 137          
BLAST of AM161863 vs. SwissProt
Match: CCR4C_ARATH (Carbon catabolite repressor protein 4 homolog 3 OS=Arabidopsis thaliana GN=CCR4-3 PE=2 SV=2)

HSP 1 Score: 52.7582 bits (125), Expect = 6.691e-7
Identity = 36/120 (30.00%), Postives = 55/120 (45.83%), Query Frame = 3
Query:    6 ISSSAKRVPIQ-IFFKLTIPKASSQVHCQCRSNSNSYSNQSHG--------------------IERRWVEAFDQSLASP-ERFTVASYNILADRNASQHSDLYVNTPSRYINWDRRKKIL 299
            +SS   + P+  + F+ +    SS       SN  S SN+S+                     I R W+++    ++   ERFTV SYNIL D N+S H +LY N    Y+ W  RK+++
Sbjct:   27 LSSGFHQCPLSSLSFRSSFVCCSSSTSGPSDSNPESSSNRSYSRRWQNPLPRRQHPDQIPSSQIARDWIDSDTTPVSQALERFTVVSYNILGDGNSSYHRELYSNVSVPYLKWGYRKRLI 146          
BLAST of AM161863 vs. TAIR peptide
Match: AT3G18500.3 (| Symbols: | DNAse I-like superfamily protein | chr3:6352544-6355297 FORWARD LENGTH=449)

HSP 1 Score: 52.7582 bits (125), Expect = 5.269e-8
Identity = 36/120 (30.00%), Postives = 55/120 (45.83%), Query Frame = 3
Query:    6 ISSSAKRVPIQ-IFFKLTIPKASSQVHCQCRSNSNSYSNQSHG--------------------IERRWVEAFDQSLASP-ERFTVASYNILADRNASQHSDLYVNTPSRYINWDRRKKIL 299
            +SS   + P+  + F+ +    SS       SN  S SN+S+                     I R W+++    ++   ERFTV SYNIL D N+S H +LY N    Y+ W  RK+++
Sbjct:   27 LSSGFHQCPLSSLSFRSSFVCCSSSTSGPSDSNPESSSNRSYSRRWQNPLPRRQHPDQIPSSQIARDWIDSDTTPVSQALERFTVVSYNILGDGNSSYHRELYSNVSVPYLKWGYRKRLI 146          
BLAST of AM161863 vs. TAIR peptide
Match: AT3G18500.2 (| Symbols: | DNAse I-like superfamily protein | chr3:6352544-6355297 FORWARD LENGTH=448)

HSP 1 Score: 52.7582 bits (125), Expect = 5.269e-8
Identity = 36/120 (30.00%), Postives = 55/120 (45.83%), Query Frame = 3
Query:    6 ISSSAKRVPIQ-IFFKLTIPKASSQVHCQCRSNSNSYSNQSHG--------------------IERRWVEAFDQSLASP-ERFTVASYNILADRNASQHSDLYVNTPSRYINWDRRKKIL 299
            +SS   + P+  + F+ +    SS       SN  S SN+S+                     I R W+++    ++   ERFTV SYNIL D N+S H +LY N    Y+ W  RK+++
Sbjct:   27 LSSGFHQCPLSSLSFRSSFVCCSSSTSGPSDSNPESSSNRSYSRRWQNPLPRRQHPDQIPSSQIARDWIDSDTTPVSQALERFTVVSYNILGDGNSSYHRELYSNVSVPYLKWGYRKRLI 146          
BLAST of AM161863 vs. TAIR peptide
Match: AT3G18500.1 (| Symbols: | DNAse I-like superfamily protein | chr3:6352544-6355297 FORWARD LENGTH=426)

HSP 1 Score: 52.7582 bits (125), Expect = 5.269e-8
Identity = 36/120 (30.00%), Postives = 55/120 (45.83%), Query Frame = 3
Query:    6 ISSSAKRVPIQ-IFFKLTIPKASSQVHCQCRSNSNSYSNQSHG--------------------IERRWVEAFDQSLASP-ERFTVASYNILADRNASQHSDLYVNTPSRYINWDRRKKIL 299
            +SS   + P+  + F+ +    SS       SN  S SN+S+                     I R W+++    ++   ERFTV SYNIL D N+S H +LY N    Y+ W  RK+++
Sbjct:   27 LSSGFHQCPLSSLSFRSSFVCCSSSTSGPSDSNPESSSNRSYSRRWQNPLPRRQHPDQIPSSQIARDWIDSDTTPVSQALERFTVVSYNILGDGNSSYHRELYSNVSVPYLKWGYRKRLI 146          
BLAST of AM161863 vs. TAIR peptide
Match: AT1G73875.1 (| Symbols: | DNAse I-like superfamily protein | chr1:27781112-27784571 FORWARD LENGTH=454)

HSP 1 Score: 52.7582 bits (125), Expect = 5.269e-8
Identity = 22/59 (37.29%), Postives = 34/59 (57.63%), Query Frame = 3
Query:  123 SHGIERRWVEAFDQSLASPERFTVASYNILADRNASQHSDLYVNTPSRYINWDRRKKIL 299
            S  +ER WV + +      ++  + SYN+L   NAS H DLY N P +++ W RRK ++
Sbjct:   79 SSSVEREWVFSANNFENLADKLVLVSYNLLGVDNASNHMDLYYNVPRKHLEWSRRKHLI 137          
The following BLAST results are available for this feature:
BLAST of AM161863 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 6
Match NameE-valueIdentityDescription
A5ASY5_VITVI4.439e-947.54Putative uncharacterized protein OS=Vitis vinifera... [more]
B9RE30_RICCO5.797e-947.62Putative uncharacterized protein OS=Ricinus commun... [more]
D7SIW3_VITVI1.687e-845.90Whole genome shotgun sequence of line PN40024, sca... [more]
B9T591_RICCO3.181e-739.71Putative uncharacterized protein OS=Ricinus commun... [more]
Q5Z6P3_ORYSJ9.255e-742.62Os06g0264900 protein OS=Oryza sativa subsp. japoni... [more]
A2YBH3_ORYSI9.255e-742.62Putative uncharacterized protein OS=Oryza sativa s... [more]
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BLAST of AM161863 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 2
Match NameE-valueIdentityDescription
CCR4E_ARATH6.691e-737.29Carbon catabolite repressor protein 4 homolog 5 OS... [more]
CCR4C_ARATH6.691e-730.00Carbon catabolite repressor protein 4 homolog 3 OS... [more]
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BLAST of AM161863 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 4
Match NameE-valueIdentityDescription
AT3G18500.35.269e-830.00| Symbols: | DNAse I-like superfamily protein | c... [more]
AT3G18500.25.269e-830.00| Symbols: | DNAse I-like superfamily protein | c... [more]
AT3G18500.15.269e-830.00| Symbols: | DNAse I-like superfamily protein | c... [more]
AT1G73875.15.269e-837.29| Symbols: | DNAse I-like superfamily protein | c... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 10..21
score
NoneNo IPR availablePANTHERPTHR12121CARBON CATABOLITE REPRESSOR PROTEIN 4coord: 47..99
score: 8
NoneNo IPR availablePANTHERPTHR12121:SF9CARBON CATABOLITE REPRESSOR PROTEIN 4-RELATEDcoord: 47..99
score: 8

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>AM161863 ID=AM161863; Name=AM161863; organism=Pisum sativum; type=EST; length=300bp
CTTTCATCTCATCCAGCGCCAAACGCGTCCCAATCCAAATCTTCTTCAAA
TTAACAATCCCCAAAGCTTCTTCACAAGTTCACTGCCAGTGTCGTTCAAA
TTCCAATTCTTATTCAAATCAATCTCACGGAATCGAACGCCGTTGGGTTG
AAGCATTCGATCAATCCCTCGCATCGCCGGAGAGATTCACCGTAGCGTCG
TATAACATACTTGCTGATAGAAATGCTTCGCAACATTCTGATTTATACGT
TAACACTCCTTCTCGTTATATCAATTGGGATCGTCGGAAAAAGATTCTTT
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