EX568991
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EX568991 vs. TrEMBL
Match: B9SDG4_RICCO (Delta DNA polymerase, putative OS=Ricinus communis GN=RCOM_1517510 PE=4 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 9.487e-28 Identity = 58/101 (57.43%), Postives = 71/101 (70.30%), Query Frame = 3 Query: 6 TTATANTKKSPIHAATFSSNLAQPPALTSRNGKPDLQDECSESESVLRQFDMNTVYGPCIGMTRLARWERAVNLGLNPPQEIERLLKSGKVQQESLWDSRI 308 +++ + K P HAA SN+ QP AL S G DLQD+ ++E VLRQFDMN YGPC+GMTR+ RWERA LGLNPP++IE LLK GKV E LWD R+ Sbjct: 26 SSSKSKKKSPPKHAAAIGSNITQPTALISHGGALDLQDDYDKNEEVLRQFDMNMAYGPCLGMTRVGRWERAQRLGLNPPKQIEDLLKGGKVNSECLWDGRV 126
BLAST of EX568991 vs. TrEMBL
Match: B9IPX7_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_665537 PE=4 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 2.337e-26 Identity = 60/98 (61.22%), Postives = 72/98 (73.47%), Query Frame = 3 Query: 15 TANTKKSPIHAATFSSNLAQPPALTSRNGKPDLQDECSESESVLRQFDMNTVYGPCIGMTRLARWERAVNLGLNPPQEIERLLKSGKVQQESLWDSRI 308 T+ +K S IHAAT S++ QP AL S + PDL+D+ + E VLRQFDMN YGPC+GM+RLARWERA LGLNPP+EIE LLK KV+ E LWD I Sbjct: 25 TSTSKSSLIHAATLGSDITQPTALVSHDS-PDLKDDYDKHEDVLRQFDMNPAYGPCLGMSRLARWERAQRLGLNPPKEIEGLLKGEKVRSECLWDGCI 121
BLAST of EX568991 vs. TrEMBL
Match: Q1H568_ARATH (At1g09815 OS=Arabidopsis thaliana GN=At1g09815 PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 1.515e-25 Identity = 56/97 (57.73%), Postives = 72/97 (74.23%), Query Frame = 3 Query: 18 ANTKKSPIHAATFSSNLAQPPALTSRNGKPDLQDECSESESVLRQFDMNTVYGPCIGMTRLARWERAVNLGLNPPQEIERLLKSGKVQQESLWDSRI 308 ++ K +P HAA S++ QP AL S +G DL ++ + E +LRQFDMN YGPC+GMTRL RWERAV LG+NPP EIE+LLK+GKVQQ+ LW R+ Sbjct: 29 SSRKVAPKHAAAQGSDVTQPAALIS-HGSVDLNEDYDKEEEMLRQFDMNITYGPCLGMTRLDRWERAVRLGMNPPNEIEKLLKTGKVQQDCLWQGRV 124
BLAST of EX568991 vs. TrEMBL
Match: Q8L9H3_ARATH (Putative uncharacterized protein OS=Arabidopsis thaliana PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 3.374e-25 Identity = 55/97 (56.70%), Postives = 72/97 (74.23%), Query Frame = 3 Query: 18 ANTKKSPIHAATFSSNLAQPPALTSRNGKPDLQDECSESESVLRQFDMNTVYGPCIGMTRLARWERAVNLGLNPPQEIERLLKSGKVQQESLWDSRI 308 ++ K +P HAA S++ QP AL S +G DL ++ + E +LRQFDMN YGPC+GMTRL RW+RAV LG+NPP EIE+LLK+GKVQQ+ LW R+ Sbjct: 29 SSRKVAPKHAAAQGSDVTQPAALIS-HGSVDLNEDYDKEEEMLRQFDMNITYGPCLGMTRLDRWQRAVRLGMNPPNEIEKLLKTGKVQQDCLWQGRV 124
BLAST of EX568991 vs. TrEMBL
Match: D7KJU8_ARALY (DNA polymerase delta subunit 4 family OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_471085 PE=4 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 5.756e-25 Identity = 55/97 (56.70%), Postives = 72/97 (74.23%), Query Frame = 3 Query: 18 ANTKKSPIHAATFSSNLAQPPALTSRNGKPDLQDECSESESVLRQFDMNTVYGPCIGMTRLARWERAVNLGLNPPQEIERLLKSGKVQQESLWDSRI 308 ++ K +P HAA S++ QP AL S +G DL ++ + E +LRQFDMN YGPC+GMTRL RWERA+ LG+NPP EIE+LLK+GKVQQ+ LW R+ Sbjct: 27 SSRKVTPKHAAAQGSDVIQPAALIS-HGSLDLNEDYDKEEEMLRQFDMNIAYGPCLGMTRLDRWERALRLGMNPPNEIEKLLKTGKVQQDCLWQGRV 122
BLAST of EX568991 vs. TrEMBL
Match: D7T7F4_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_39.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00024265001 PE=4 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 1.852e-23 Identity = 54/99 (54.55%), Postives = 68/99 (68.69%), Query Frame = 3 Query: 3 PTTATANTKKSPIHAATFSSNLAQPPALTSRNGKPDLQDECSESESVLRQFDMNTVYGPCIGMTRLARWERAVNLGLNPPQEIERLLKSGKVQQESLWD 299 P + +TK P H AT S++ QP L++ N + DE +E+VLRQFDMN YGPC+GM+RLARWERA LGLNPP+EIE LLK GK + + LWD Sbjct: 19 PKPSKKSTKIQPTHVATLGSDVVQPSTLSAHNLQ---DDEYDGNETVLRQFDMNMAYGPCLGMSRLARWERAQRLGLNPPKEIETLLKQGKARADCLWD 114
BLAST of EX568991 vs. TrEMBL
Match: A5AG58_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_024389 PE=4 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 2.418e-23 Identity = 54/99 (54.55%), Postives = 68/99 (68.69%), Query Frame = 3 Query: 3 PTTATANTKKSPIHAATFSSNLAQPPALTSRNGKPDLQDECSESESVLRQFDMNTVYGPCIGMTRLARWERAVNLGLNPPQEIERLLKSGKVQQESLWD 299 P + +TK P H AT S++ QP L++ N + DE +E+VLRQFDMN YGPC+GM+RLARWERA LGLNPP+EIE LLK GK + + LWD Sbjct: 24 PKPSKKSTKIPPTHVATLGSDVVQPSTLSAHNLQ---DDEYDGNETVLRQFDMNMAYGPCLGMSRLARWERAQRLGLNPPKEIETLLKQGKARADCLWD 119
BLAST of EX568991 vs. TrEMBL
Match: A9PI30_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_571392 PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 5.387e-23 Identity = 55/101 (54.46%), Postives = 67/101 (66.34%), Query Frame = 3 Query: 6 TTATANTKKSPIHAATFSSNLAQPPALTSRNGKPDLQDECSESESVLRQFDMNTVYGPCIGMTRLARWERAVNLGLNPPQEIERLLKSGKVQQESLWDSRI 308 T T++ K S H A+ S++ QP A S +G PD +D E E +LRQFDMN YGPC+GM+RLARWERA LGLNPP E E LLK+ VQ E WD R+ Sbjct: 23 TKPTSSKKSSLHHIASLGSDITQPTAQVS-HGSPDHKDYYDEHEELLRQFDMNMAYGPCLGMSRLARWERAQRLGLNPPNEFEGLLKAEMVQSECWWDGRV 122
BLAST of EX568991 vs. TrEMBL
Match: A9PA85_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 5.387e-23 Identity = 55/101 (54.46%), Postives = 67/101 (66.34%), Query Frame = 3 Query: 6 TTATANTKKSPIHAATFSSNLAQPPALTSRNGKPDLQDECSESESVLRQFDMNTVYGPCIGMTRLARWERAVNLGLNPPQEIERLLKSGKVQQESLWDSRI 308 T T++ K S H A+ S++ QP A S +G PD +D E E +LRQFDMN YGPC+GM+RLARWERA LGLNPP E E LLK+ VQ E WD R+ Sbjct: 23 TKPTSSKKSSLHHIASLGSDITQPTAQVS-HGSPDHKDYYDEHEGLLRQFDMNMAYGPCLGMSRLARWERAQRLGLNPPNEFEGLLKAEMVQSECWWDGRV 122
BLAST of EX568991 vs. TrEMBL
Match: A9NT40_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 4.884e-16 Identity = 42/86 (48.84%), Postives = 56/86 (65.12%), Query Frame = 3 Query: 51 TFSSNLAQPPALTSRNGKPDLQDECSESESVLRQFDMNTVYGPCIGMTRLARWERAVNLGLNPPQEIERLLKSGKVQQESLWDSRI 308 T S+ AQP AL ++ G+ D D+ E VLRQFDMN YGPCIG+ RL RWERA LGL+PPQ+++ L+ + LW+ R+ Sbjct: 51 TLGSDSAQPAALIAK-GRRDYNDDIDNMEEVLRQFDMNMKYGPCIGVPRLERWERASKLGLDPPQQVKVFLERAGGISDCLWEGRV 135
BLAST of EX568991 vs. SwissProt
Match: DPOD4_BOVIN (DNA polymerase delta subunit 4 OS=Bos taurus GN=POLD4 PE=1 SV=1) HSP 1 Score: 59.3066 bits (142), Expect = 6.968e-9 Identity = 29/61 (47.54%), Postives = 38/61 (62.30%), Query Frame = 3 Query: 105 PDLQDEC------SESESVLRQFDMNTVYGPCIGMTRLARWERAVNLGLNPPQEIERLLKS 269 PDL +E E +LRQFD+ YGPC G+TRL RW RA +GL PP E+ ++L+S Sbjct: 30 PDLGEEPLPLSVDEEELELLRQFDLAWQYGPCTGITRLQRWHRAEQMGLKPPPEVHQVLQS 90
BLAST of EX568991 vs. SwissProt
Match: DPOD4_HUMAN (DNA polymerase delta subunit 4 OS=Homo sapiens GN=POLD4 PE=1 SV=1) HSP 1 Score: 58.9214 bits (141), Expect = 9.101e-9 Identity = 27/56 (48.21%), Postives = 37/56 (66.07%), Query Frame = 3 Query: 102 KPDLQDECSESESVLRQFDMNTVYGPCIGMTRLARWERAVNLGLNPPQEIERLLKS 269 +P +DE +LRQFD+ YGPC G+TRL RW RA +GL PP E+ ++LK+ Sbjct: 35 EPQPRDEEEAELELLRQFDLAWQYGPCTGITRLQRWCRAKQMGLEPPPEVWQVLKT 90
BLAST of EX568991 vs. SwissProt
Match: DPOD4_MOUSE (DNA polymerase delta subunit 4 OS=Mus musculus GN=Pold4 PE=2 SV=1) HSP 1 Score: 58.5362 bits (140), Expect = 1.189e-8 Identity = 34/83 (40.96%), Postives = 48/83 (57.83%), Query Frame = 3 Query: 75 PPALTSRNGKPDLQDEC---SESES---VLRQFDMNTVYGPCIGMTRLARWERAVNLGLNPPQEIERLLKSGKVQ---QESLW 296 PP + P+L ++ S+ E+ +LRQFD+ YGPC G+TRL RW RA +GL PP E+ ++LK+ Q SLW Sbjct: 20 PPGHSKGELAPELGEDTQSLSQEETELELLRQFDLAWQYGPCTGITRLQRWSRAEQMGLKPPLEVYQVLKAHPEDPHFQCSLW 102
BLAST of EX568991 vs. SwissProt
Match: DPOD4_SCHPO (DNA polymerase delta subunit 4 OS=Schizosaccharomyces pombe GN=cdm1 PE=2 SV=1) HSP 1 Score: 55.4546 bits (132), Expect = 1.006e-7 Identity = 24/69 (34.78%), Postives = 40/69 (57.97%), Query Frame = 3 Query: 84 LTSRNGKPDLQDECSESESVLRQFDMNTVYGPCIGMTRLARWERAVNLGLNPPQEIERLLKSGKVQQES 290 + R +P + ++ E +L FD YGP +GMTR+ RW+RA N LNPP+ + ++L + +E+ Sbjct: 77 MAERISEPIHCENITKVEFILHHFDTTARYGPYLGMTRMQRWKRAKNFNLNPPETVGKILMLEEADEEN 145
BLAST of EX568991 vs. TAIR peptide
Match: AT1G09815.1 (| Symbols: POLD4 | polymerase delta 4 | chr1:3189460-3190050 FORWARD LENGTH=124) HSP 1 Score: 119.013 bits (297), Expect = 6.972e-28 Identity = 56/97 (57.73%), Postives = 72/97 (74.23%), Query Frame = 3 Query: 18 ANTKKSPIHAATFSSNLAQPPALTSRNGKPDLQDECSESESVLRQFDMNTVYGPCIGMTRLARWERAVNLGLNPPQEIERLLKSGKVQQESLWDSRI 308 ++ K +P HAA S++ QP AL S +G DL ++ + E +LRQFDMN YGPC+GMTRL RWERAV LG+NPP EIE+LLK+GKVQQ+ LW R+ Sbjct: 29 SSRKVAPKHAAAQGSDVTQPAALIS-HGSVDLNEDYDKEEEMLRQFDMNITYGPCLGMTRLDRWERAVRLGMNPPNEIEKLLKTGKVQQDCLWQGRV 124 The following BLAST results are available for this feature:
BLAST of EX568991 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl) Total hits: 10
BLAST of EX568991 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot) Total hits: 4
BLAST of EX568991 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EX568991 ID=EX568991; Name=EX568991; organism=Pisum sativum; type=EST; length=378bpback to top Annotated Terms
The
following terms have been associated with
this EST:
|