EX570172

EST Overview


Name	EX570172
Unique Name	EX570172
Type	EST
Organism	Pisum sativum (pea)
Sequence length	262

Libraries


Library Name	Type
LIBEST_021973 Pisum sativum shoot apical meristem ESTs	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Pisum sativum unigene v1	Pisum sativum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Pisum sativum unigene v1	2010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide	2011-02-03

Homology

[Close]

BLAST of EX570172 vs. TrEMBL
Match: Q6YBV3_POPTM (Cellulose synthase OS=Populus tremuloides GN=CesA7 PE=2 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 7.645e-9
Identity = 31/35 (88.57%), Postives = 33/35 (94.29%), Query Frame = -2

Query:    1 MHTGGRLIAGSHNRNEFVLINAEENGRIKSVCELS 105
            M+TGGRLIAGSHNRNEFVLINA+EN RIKSV ELS
Sbjct:    1 MNTGGRLIAGSHNRNEFVLINADENARIKSVKELS 35

[Close]

BLAST of EX570172 vs. TrEMBL
Match: Q6J8W8_9ROSI (Cellulose synthase OS=Populus tremula x Populus tremuloides GN=CesA4 PE=2 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 7.645e-9
Identity = 31/35 (88.57%), Postives = 33/35 (94.29%), Query Frame = -2

Query:    1 MHTGGRLIAGSHNRNEFVLINAEENGRIKSVCELS 105
            M+TGGRLIAGSHNRNEFVLINA+EN RIKSV ELS
Sbjct:    1 MNTGGRLIAGSHNRNEFVLINADENARIKSVKELS 35

[Close]

BLAST of EX570172 vs. TrEMBL
Match: B9HGD0_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_819877 PE=4 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 7.645e-9
Identity = 31/35 (88.57%), Postives = 33/35 (94.29%), Query Frame = -2

Query:    1 MHTGGRLIAGSHNRNEFVLINAEENGRIKSVCELS 105
            M+TGGRLIAGSHNRNEFVLINA+EN RIKSV ELS
Sbjct:    1 MNTGGRLIAGSHNRNEFVLINADENARIKSVQELS 35

[Close]

BLAST of EX570172 vs. TrEMBL
Match: B9HGC9_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_819877 PE=4 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 7.645e-9
Identity = 31/35 (88.57%), Postives = 33/35 (94.29%), Query Frame = -2

Query:    1 MHTGGRLIAGSHNRNEFVLINAEENGRIKSVCELS 105
            M+TGGRLIAGSHNRNEFVLINA+EN RIKSV ELS
Sbjct:    1 MNTGGRLIAGSHNRNEFVLINADENARIKSVQELS 35

[Close]

BLAST of EX570172 vs. TrEMBL
Match: B9H5M9_POPTR (Putative uncharacterized protein OS=Populus trichocarpa GN=POPTRDRAFT_760228 PE=4 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 7.645e-9
Identity = 31/35 (88.57%), Postives = 33/35 (94.29%), Query Frame = -2

Query:    1 MHTGGRLIAGSHNRNEFVLINAEENGRIKSVCELS 105
            M+TGGRLIAGSHNRNEFVLINA+EN RIKSV ELS
Sbjct:    1 MNTGGRLIAGSHNRNEFVLINADENARIKSVKELS 35

[Close]

BLAST of EX570172 vs. TrEMBL
Match: D7MSJ2_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_496689 PE=4 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 1.703e-8
Identity = 30/35 (85.71%), Postives = 33/35 (94.29%), Query Frame = -2

Query:    1 MHTGGRLIAGSHNRNEFVLINAEENGRIKSVCELS 105
            M+TGGRLIAGSHNRNEFVLINA+EN RI+SV ELS
Sbjct:    1 MNTGGRLIAGSHNRNEFVLINADENARIRSVQELS 35

[Close]

BLAST of EX570172 vs. TrEMBL
Match: D7MGE1_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_490712 PE=4 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 6.471e-8
Identity = 29/35 (82.86%), Postives = 33/35 (94.29%), Query Frame = -2

Query:    1 MHTGGRLIAGSHNRNEFVLINAEENGRIKSVCELS 105
            M+TGGRLIAGSHNRNEFVLINA+E+ RI+SV ELS
Sbjct:    1 MNTGGRLIAGSHNRNEFVLINADESARIRSVQELS 35

[Close]

BLAST of EX570172 vs. TrEMBL
Match: D7M282_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_908936 PE=4 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 8.452e-8
Identity = 29/35 (82.86%), Postives = 33/35 (94.29%), Query Frame = -2

Query:    1 MHTGGRLIAGSHNRNEFVLINAEENGRIKSVCELS 105
            M+TGGRLIAGSHNRNEFVLINA+E+ RI+SV ELS
Sbjct:    1 MNTGGRLIAGSHNRNEFVLINADESARIRSVEELS 35

[Close]

BLAST of EX570172 vs. TrEMBL
Match: D7LBY5_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_900606 PE=4 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 8.452e-8
Identity = 29/35 (82.86%), Postives = 32/35 (91.43%), Query Frame = -2

Query:    1 MHTGGRLIAGSHNRNEFVLINAEENGRIKSVCELS 105
            M+TGGRLIAGSHNRNEFVLINA+E  RI+SV ELS
Sbjct:    1 MNTGGRLIAGSHNRNEFVLINADETARIRSVQELS 35

[Close]

BLAST of EX570172 vs. SwissProt
Match: CESA6_ARATH (Cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Arabidopsis thaliana GN=CESA6 PE=1 SV=2)

HSP 1 Score: 62.3882 bits (150), Expect = 8.487e-10
Identity = 30/35 (85.71%), Postives = 33/35 (94.29%), Query Frame = -2

Query:    1 MHTGGRLIAGSHNRNEFVLINAEENGRIKSVCELS 105
            M+TGGRLIAGSHNRNEFVLINA+EN RI+SV ELS
Sbjct:    1 MNTGGRLIAGSHNRNEFVLINADENARIRSVQELS 35

[Close]

BLAST of EX570172 vs. SwissProt
Match: CESA2_ARATH (Cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Arabidopsis thaliana GN=CESA2 PE=1 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 3.225e-9
Identity = 29/35 (82.86%), Postives = 33/35 (94.29%), Query Frame = -2

Query:    1 MHTGGRLIAGSHNRNEFVLINAEENGRIKSVCELS 105
            M+TGGRLIAGSHNRNEFVLINA+E+ RI+SV ELS
Sbjct:    1 MNTGGRLIAGSHNRNEFVLINADESARIRSVQELS 35

[Close]

BLAST of EX570172 vs. SwissProt
Match: CESA5_ARATH (Cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Arabidopsis thaliana GN=CESA5 PE=1 SV=2)

HSP 1 Score: 60.077 bits (144), Expect = 4.212e-9
Identity = 29/35 (82.86%), Postives = 33/35 (94.29%), Query Frame = -2

Query:    1 MHTGGRLIAGSHNRNEFVLINAEENGRIKSVCELS 105
            M+TGGRLIAGSHNRNEFVLINA+E+ RI+SV ELS
Sbjct:    1 MNTGGRLIAGSHNRNEFVLINADESARIRSVEELS 35

[Close]

BLAST of EX570172 vs. SwissProt
Match: CESA9_ARATH (Probable cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Arabidopsis thaliana GN=CESA9 PE=2 SV=1)

HSP 1 Score: 56.9954 bits (136), Expect = 3.566e-8
Identity = 27/35 (77.14%), Postives = 31/35 (88.57%), Query Frame = -2

Query:    1 MHTGGRLIAGSHNRNEFVLINAEENGRIKSVCELS 105
            M+TGGRLIAGSHNRNEFVLINA++  RI+S  ELS
Sbjct:    1 MNTGGRLIAGSHNRNEFVLINADDTARIRSAEELS 35

[Close]

BLAST of EX570172 vs. TAIR peptide
Match: AT5G64740.1 (| Symbols: CESA6, IXR2, E112, PRC1 | cellulose synthase 6 | chr5:25881555-25886333 FORWARD LENGTH=1084)

HSP 1 Score: 62.3882 bits (150), Expect = 6.636e-11
Identity = 30/35 (85.71%), Postives = 33/35 (94.29%), Query Frame = -2

Query:    1 MHTGGRLIAGSHNRNEFVLINAEENGRIKSVCELS 105
            M+TGGRLIAGSHNRNEFVLINA+EN RI+SV ELS
Sbjct:    1 MNTGGRLIAGSHNRNEFVLINADENARIRSVQELS 35

[Close]

BLAST of EX570172 vs. TAIR peptide
Match: AT4G39350.1 (| Symbols: CESA2, ATH-A, ATCESA2 | cellulose synthase A2 | chr4:18297078-18301890 FORWARD LENGTH=1084)

HSP 1 Score: 60.4622 bits (145), Expect = 2.522e-10
Identity = 29/35 (82.86%), Postives = 33/35 (94.29%), Query Frame = -2

Query:    1 MHTGGRLIAGSHNRNEFVLINAEENGRIKSVCELS 105
            M+TGGRLIAGSHNRNEFVLINA+E+ RI+SV ELS
Sbjct:    1 MNTGGRLIAGSHNRNEFVLINADESARIRSVQELS 35

[Close]

BLAST of EX570172 vs. TAIR peptide
Match: AT5G09870.1 (| Symbols: CESA5 | cellulose synthase 5 | chr5:3073356-3077974 FORWARD LENGTH=1069)

HSP 1 Score: 60.077 bits (144), Expect = 3.294e-10
Identity = 29/35 (82.86%), Postives = 33/35 (94.29%), Query Frame = -2

Query:    1 MHTGGRLIAGSHNRNEFVLINAEENGRIKSVCELS 105
            M+TGGRLIAGSHNRNEFVLINA+E+ RI+SV ELS
Sbjct:    1 MNTGGRLIAGSHNRNEFVLINADESARIRSVEELS 35

[Close]

BLAST of EX570172 vs. TAIR peptide
Match: AT2G21770.1 (| Symbols: CESA9, CESA09 | cellulose synthase A9 | chr2:9284837-9289495 FORWARD LENGTH=1088)

HSP 1 Score: 56.9954 bits (136), Expect = 2.788e-9
Identity = 27/35 (77.14%), Postives = 31/35 (88.57%), Query Frame = -2

Query:    1 MHTGGRLIAGSHNRNEFVLINAEENGRIKSVCELS 105
            M+TGGRLIAGSHNRNEFVLINA++  RI+S  ELS
Sbjct:    1 MNTGGRLIAGSHNRNEFVLINADDTARIRSAEELS 35

The following BLAST results are available for this feature:

BLAST of EX570172 vs. TrEMBL
BLAST of EX570172 vs. SwissProt
BLAST of EX570172 vs. TAIR peptide

BLAST of EX570172 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 9


Match Name	E-value	Identity	Description
Q6YBV3_POPTM	7.645e-9	88.57	Cellulose synthase OS=Populus tremuloides GN=CesA7...	[more]
Q6J8W8_9ROSI	7.645e-9	88.57	Cellulose synthase OS=Populus tremula x Populus tr...	[more]
B9HGD0_POPTR	7.645e-9	88.57	Predicted protein (Fragment) OS=Populus trichocarp...	[more]
B9HGC9_POPTR	7.645e-9	88.57	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9H5M9_POPTR	7.645e-9	88.57	Putative uncharacterized protein OS=Populus tricho...	[more]
D7MSJ2_ARALY	1.703e-8	85.71	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
D7MGE1_ARALY	6.471e-8	82.86	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
D7M282_ARALY	8.452e-8	82.86	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
D7LBY5_ARALY	8.452e-8	82.86	Putative uncharacterized protein OS=Arabidopsis ly...	[more]

BLAST of EX570172 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 4


Match Name	E-value	Identity	Description
CESA6_ARATH	8.487e-10	85.71	Cellulose synthase A catalytic subunit 6 [UDP-form...	[more]
CESA2_ARATH	3.225e-9	82.86	Cellulose synthase A catalytic subunit 2 [UDP-form...	[more]
CESA5_ARATH	4.212e-9	82.86	Cellulose synthase A catalytic subunit 5 [UDP-form...	[more]
CESA9_ARATH	3.566e-8	77.14	Probable cellulose synthase A catalytic subunit 9 ...	[more]

BLAST of EX570172 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 4


Match Name	E-value	Identity	Description
AT5G64740.1	6.636e-11	85.71	\| Symbols: CESA6, IXR2, E112, PRC1 \| cellulose syn...	[more]
AT4G39350.1	2.522e-10	82.86	\| Symbols: CESA2, ATH-A, ATCESA2 \| cellulose synth...	[more]
AT5G09870.1	3.294e-10	82.86	\| Symbols: CESA5 \| cellulose synthase 5 \| chr5:307...	[more]
AT2G21770.1	2.788e-9	77.14	\| Symbols: CESA9, CESA09 \| cellulose synthase A9 \|...	[more]

Properties


Property Name	Value
Singlet in analysis	Pisum sativum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EX570172 ID=EX570172; Name=EX570172; organism=Pisum sativum; type=EST; length=262bp
ACTCAGTTCGCAAACTGACTTAATCCTTCCATTTTCTTCGGCATTGATAA
GAACAAACTCGTTCCTGTTGTGTGAACCAGCAATGAGTCTACCACCGGTA
TGCATCACTGACACTCACAACACACAACTAAAACTCCCGAACTAGTAACA
GTACTCACCAACCCTTGTCGAAATCGAAAAACCCCAGTAACTTAAATCAC
ATAAAGATCCAATTTTGCATTGCTAAACAACACAAAAACCTTCATCAAAC
AAAAACCCACAG

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