FG530245

EST Overview
NameFG530245
Unique NameFG530245
TypeEST
OrganismPisum sativum (pea)
Sequence length676
Libraries
Library NameType
LIBEST_023217 MeriP Pisum sativum Shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Pisum sativum unigene v12010-12-29
Homology
BLAST of FG530245 vs. TrEMBL
Match: Q8SKU2_PEA (Tic62 protein OS=Pisum sativum GN=tic62 PE=2 SV=2)

HSP 1 Score: 204.142 bits (518), Expect = 8.055e-51
Identity = 110/157 (70.06%), Postives = 110/157 (70.06%), Query Frame = 1
Query:    4 SKPVAKTEQPLSPYTAYDDLXXXXXXXXXXXXXXXQINISDAVXXXXXXXXXXXXQEIDGISQTTSSSKGKESLSPYAAYXXXXXXXXXXXXXXXXXXXXRDTVVVSSNGPAQLSVEDTPKNEEQHLHEPKSRPLSPYAMYEDLKPPASPSPSFRKS 474
            SKPVAKTEQPLSPYTAYDDL               QINISDAV            QEIDGISQTTSSSKGKESLSPYAAY                    RDTVVVSSNGPAQLSVEDTPKNEEQHLHEPKSRPLSPYAMYEDLKPPASPSPSFRKS
Sbjct:  378 SKPVAKTEQPLSPYTAYDDLKPPSSPSPTKPSEKKQINISDAVPTPISSDTPSSIQEIDGISQTTSSSKGKESLSPYAAYPDLKPPSSPSPSVPTTSLSKRDTVVVSSNGPAQLSVEDTPKNEEQHLHEPKSRPLSPYAMYEDLKPPASPSPSFRKS 534          
BLAST of FG530245 vs. TrEMBL
Match: B9HRS5_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_557298 PE=4 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 3.785e-8
Identity = 45/152 (29.61%), Postives = 59/152 (38.82%), Query Frame = 1
Query:   16 AKTEQPLSPYTAYDDLXXXXXXXXXXXXXXXQINISDAVXXXXXXXXXXXXQEIDGISQTTSS---SKGKESLSPYAAYXXXXXXXXXXXXXXXXXXXXRDTVVVSSNGPAQLSVEDTPKNEEQHLHEPKSRPLSPYAMYEDLKPPASPSPS 462
            A   +PLSPYTAY+DL               + N++                   GI++T  +   +K    LSPY AY                        V  +      S   T   + QH  EP  RPLSPY +Y+DLKPP SPSP+
Sbjct:  356 AVVTRPLSPYTAYEDLKPPTSPIPTQPSGKKE-NVNSVEAVSMLDTPDPSPASASGIAETKPAPVETKTARPLSPYVAYDDLKPPTSPSPTAPVGLVAITAPAVPKTGN----SAPPTAAIDNQHHEEPNPRPLSPYPIYDDLKPPTSPSPT 502          
BLAST of FG530245 vs. TrEMBL
Match: D7TPX1_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_63.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00031907001 PE=4 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 1.438e-7
Identity = 28/48 (58.33%), Postives = 34/48 (70.83%), Query Frame = 1
Query:  319 VSSNGPAQLSVEDTPKNEEQHLHEPKSRPLSPYAMYEDLKPPASPSPS 462
            +S N  AQ    D PK+E+ H+ + K RPLSP+ MYEDLKPP SPSPS
Sbjct:  481 ISGNNTAQPPAADIPKDEQHHV-QAKPRPLSPFTMYEDLKPPTSPSPS 527          
BLAST of FG530245 vs. TAIR peptide
Match: AT3G18890.1 (| Symbols: | NAD(P)-binding Rossmann-fold superfamily protein | chr3:6511169-6514729 FORWARD LENGTH=641)

HSP 1 Score: 54.6842 bits (130), Expect = 5.430e-8
Identity = 36/99 (36.36%), Postives = 47/99 (47.47%), Query Frame = 1
Query:  223 LSPYAAYXXXXXXXXXXXXXXXXXXXXRDTVVVSSNGPAQLSVEDTPKN-------EEQHLHEPKSRPLSPYAMYEDLKPPASPSP---SFRKS*ELPP 489
            LSPYA+Y                    +   V ++  P + +V   P +       E + + E K RPLSPYA YE+LKPP+SPSP   S RKS  L P
Sbjct:  377 LSPYASYEDLKPPTSPIPNSTTSVSPAKSKEVDATQVPVEANVVPVPDSTSNVPVVEVKQVEEKKERPLSPYARYENLKPPSSPSPTASSTRKSDSLSP 475          
The following BLAST results are available for this feature:
BLAST of FG530245 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 3
Match NameE-valueIdentityDescription
Q8SKU2_PEA8.055e-5170.06Tic62 protein OS=Pisum sativum GN=tic62 PE=2 SV=2[more]
B9HRS5_POPTR3.785e-829.61Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
D7TPX1_VITVI1.438e-758.33Whole genome shotgun sequence of line PN40024, sca... [more]
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BLAST of FG530245 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT3G18890.15.430e-836.36| Symbols: | NAD(P)-binding Rossmann-fold superfa... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 22..36
score: NAcoord: 45..56
score: NAcoord: 82..101
score

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FG530245 ID=FG530245; Name=FG530245; organism=Pisum sativum; type=EST; length=676bp
ACATCAAAACCAGTGGCGAAAACGGAACAGCCACTTTCTCCTTATACCGC
TTATGATGATTTAAAGCCACCATCATCTCCTTCTCCAACCAAGCCTAGTG
AGAAGAAACAGATAAACATCAGTGATGCAGTTCCAACACCTATTTCTTCA
GATACTCCAAGTAGCATTCAAGAAATAGATGGCATTTCTCAGACAACATC
TTCCTCAAAAGGGAAGGAGTCTCTATCTCCTTACGCAGCATATCCTGATT
TAAAGCCTCCTAGTTCACCATCTCCGAGTGTACCAACTACATCACTATCG
AAGAGAGATACAGTAGTAGTATCAAGCAATGGACCAGCTCAACTTTCTGT
GGAAGATACACCAAAGAATGAAGAACAGCACCTTCATGAACCAAAGTCAA
GGCCACTTTCACCTTATGCAATGTATGAGGACTTGAAGCCTCCTGCATCA
CCATCACCTTCCTTCAGAAAATCCTAGGAACTGCCTCCAGCCTATGGAAT
CAGACAAGGATTATTTTATTGAAGAGTTTATGCAGCAACAATTAAGGAGG
ATTGTCACTGAAAGTATGAAGATCCGAAGCATTTATTTGAATGGAAATTT
TCATGCGATTTATTTCTTGATAACCTTTTGAGGATAGTCACTCAAAAAGC
ACTGTTGTTTTTATATATATAACTTA
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