FG534142
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FG534142 vs. TrEMBL
Match: C0JP31_LOTJA (Putative basic helix-loop-helix protein BHLH25 OS=Lotus japonicus PE=4 SV=1) HSP 1 Score: 62.7734 bits (151), Expect = 1.291e-8 Identity = 36/54 (66.67%), Postives = 39/54 (72.22%), Query Frame = 3 Query: 3 VLFXTGEDHD--------HEYCISSIQEALKAVMENS--DGDESASGNVKRQRT 134 VLF TG+D D +YCISSIQEALKAVME + GDESASGNVKRQRT Sbjct: 273 VLFITGDDQDSSGEDQSQQQYCISSIQEALKAVMEKNGGGGDESASGNVKRQRT 326
BLAST of FG534142 vs. TrEMBL
Match: B9SEI3_RICCO (DNA binding protein, putative OS=Ricinus communis GN=RCOM_0705340 PE=4 SV=1) HSP 1 Score: 56.9954 bits (136), Expect = 7.087e-7 Identity = 33/56 (58.93%), Postives = 37/56 (66.07%), Query Frame = 3 Query: 3 VLFXTGEDHDH------------EYCISSIQEALKAVMENSDGDESASGNVKRQRT 134 VLF TGE+ +Y ISSIQEALKAVME S GDES+SG+VKRQRT Sbjct: 294 VLFITGEEDSSSNSNEEDQQQQPQYSISSIQEALKAVMEKSGGDESSSGSVKRQRT 349
BLAST of FG534142 vs. TAIR peptide
Match: AT1G68810.1 (| Symbols: | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr1:25861289-25862882 FORWARD LENGTH=368) HSP 1 Score: 51.6026 bits (122), Expect = 1.174e-7 Identity = 29/49 (59.18%), Postives = 36/49 (73.47%), Query Frame = 3 Query: 3 VLFXTGEDH-----DHEYCISSIQEALKAVMENSDGDE-SASGNVKRQR 131 VLF TGE+ + EYCI +I+EALKAVME S+ +E S+SGN KRQR Sbjct: 301 VLFVTGEESSGEEVEEEYCIGTIEEALKAVMEKSNVEESSSSGNAKRQR 349
BLAST of FG534142 vs. TAIR peptide
Match: AT1G68810.1 (| Symbols: | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr1:25861289-25862882 FORWARD LENGTH=368) HSP 1 Score: 51.6026 bits (122), Expect = 1.174e-7 Identity = 29/49 (59.18%), Postives = 36/49 (73.47%), Query Frame = 3 Query: 3 VLFXTGEDH-----DHEYCISSIQEALKAVMENSDGDE-SASGNVKRQR 131 VLF TGE+ + EYCI +I+EALKAVME S+ +E S+SGN KRQR Sbjct: 301 VLFVTGEESSGEEVEEEYCIGTIEEALKAVMEKSNVEESSSSGNAKRQR 349
BLAST of FG534142 vs. TrEMBL
Match: C0JP31_LOTJA (Putative basic helix-loop-helix protein BHLH25 OS=Lotus japonicus PE=4 SV=1) HSP 1 Score: 62.7734 bits (151), Expect = 1.615e-8 Identity = 36/54 (66.67%), Postives = 39/54 (72.22%), Query Frame = 3 Query: 3 VLFXTGEDHD--------HEYCISSIQEALKAVMENS--DGDESASGNVKRQRT 134 VLF TG+D D +YCISSIQEALKAVME + GDESASGNVKRQRT Sbjct: 273 VLFITGDDQDSSGEDQSQQQYCISSIQEALKAVMEKNGGGGDESASGNVKRQRT 326
BLAST of FG534142 vs. TrEMBL
Match: B9SEI3_RICCO (DNA binding protein, putative OS=Ricinus communis GN=RCOM_0705340 PE=4 SV=1) HSP 1 Score: 56.9954 bits (136), Expect = 8.862e-7 Identity = 33/56 (58.93%), Postives = 37/56 (66.07%), Query Frame = 3 Query: 3 VLFXTGEDHDH------------EYCISSIQEALKAVMENSDGDESASGNVKRQRT 134 VLF TGE+ +Y ISSIQEALKAVME S GDES+SG+VKRQRT Sbjct: 294 VLFITGEEDSSSNSNEEDQQQQPQYSISSIQEALKAVMEKSGGDESSSGSVKRQRT 349
BLAST of FG534142 vs. Lotus protein
Match: chr2.CM0124.30.r2.m (- phase: 0 ) HSP 1 Score: 62.7734 bits (151), Expect = 3.385e-11 Identity = 36/54 (66.67%), Postives = 39/54 (72.22%), Query Frame = 3 Query: 3 VLFXTGEDHD--------HEYCISSIQEALKAVMENS--DGDESASGNVKRQRT 134 VLF TG+D D +YCISSIQEALKAVME + GDESASGNVKRQRT Sbjct: 273 VLFITGDDQDSSGEDQSQQQYCISSIQEALKAVMEKNGGGGDESASGNVKRQRT 326
BLAST of FG534142 vs. Lotus protein
Match: chr5.CM0311.20.r2.d (- phase: 0 ) HSP 1 Score: 53.9138 bits (128), Expect = 1.572e-8 Identity = 33/51 (64.71%), Postives = 38/51 (74.51%), Query Frame = 3 Query: 3 VLFXTGEDHDHEY------CISSIQEALKAVMENSDGDES-ASGNVKRQRT 134 VLF TG+D++ + ISSIQEALKAV+E S GDES ASGNVKRQRT Sbjct: 253 VLFITGDDNNEDSYSSRSCIISSIQEALKAVIEKSVGDESAASGNVKRQRT 303
BLAST of FG534142 vs. Soybean peptides
Match: Glyma02g11190.1|PACid:16247706 () HSP 1 Score: 57.3806 bits (137), Expect = 3.351e-9 Identity = 34/57 (59.65%), Postives = 39/57 (68.42%), Query Frame = 3 Query: 3 VLFXTGEDHDH------------EYCISSIQEALKAVMENS-DGDESASGNVKRQRT 134 VL TG++ ++ +YCISSIQEALKAVME S GDESASGNVKRQRT Sbjct: 279 VLVITGDEEENSNTNNGEQSMQQQYCISSIQEALKAVMEKSGGGDESASGNVKRQRT 335
BLAST of FG534142 vs. Soybean peptides
Match: Glyma10g34910.1|PACid:16280975 () HSP 1 Score: 56.225 bits (134), Expect = 7.465e-9 Identity = 36/64 (56.25%), Postives = 39/64 (60.94%), Query Frame = 3 Query: 3 VLFXTGE----------DHDH--------EYCISSIQEALKAVMENSDGD--ESASGNVKRQRT 134 VLF TGE DH H +YCI+SIQEALKAVME S GD ESAS N+KRQRT Sbjct: 284 VLFITGEEADSSSGSTEDHSHHHHQQQQQQYCINSIQEALKAVMEKSVGDHHESASANIKRQRT 347
BLAST of FG534142 vs. Soybean peptides
Match: Glyma01g22530.1|PACid:16244239 () HSP 1 Score: 56.225 bits (134), Expect = 7.465e-9 Identity = 29/39 (74.36%), Postives = 32/39 (82.05%), Query Frame = 3 Query: 21 EDHDHEYCISSIQEALKAVMENS-DGDESASGNVKRQRT 134 + ++CISSIQEALKAVME S GDESASGNVKRQRT Sbjct: 299 QQQQQQFCISSIQEALKAVMEKSGGGDESASGNVKRQRT 337
BLAST of FG534142 vs. Soybean peptides
Match: Glyma20g32660.1|PACid:16317639 () HSP 1 Score: 54.6842 bits (130), Expect = 2.172e-8 Identity = 34/57 (59.65%), Postives = 37/57 (64.91%), Query Frame = 3 Query: 3 VLFXTGEDHD-----------HEYCISSIQEALKAVMENSDGD--ESASGNVKRQRT 134 VLF TGE+ D + CISSIQEALKAVME S GD ESAS N+KRQRT Sbjct: 308 VLFITGEETDSSSSEDHSQQQQQCCISSIQEALKAVMEKSVGDHHESASANIKRQRT 364
BLAST of FG534142 vs. Medicago proteins
Match: IMGA|Medtr1g093750.1 (Transcription factor bHLH30 (AHRD V1 ***- Q9S7Y1); contains Interpro domain(s) IPR001092 Basic helix-loop-helix dimerisation region bHLH chr01_pseudomolecule_IMGAG_V3.5 26478848-26475949 E EGN_Mt100125 20100825) HSP 1 Score: 77.0258 bits (188), Expect = 2.510e-15 Identity = 38/44 (86.36%), Postives = 40/44 (90.91%), Query Frame = 3 Query: 3 VLFXTGEDHDHEYCISSIQEALKAVMENSDGDESASGNVKRQRT 134 VLF TGE+ DHEYCISSIQEALKAVME S GDESASG+VKRQRT Sbjct: 288 VLFITGEEDDHEYCISSIQEALKAVMEKSVGDESASGSVKRQRT 331 The following BLAST results are available for this feature:
BLAST of FG534142 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl) Total hits: 2
BLAST of FG534142 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide) Total hits: 1
BLAST of FG534142 vs. TAIR peptide
Analysis Date: 2011-04-21 (Homology Analysis: Pisum sativum unigene v2 vs TAIR 10 peptide) Total hits: 1
BLAST of FG534142 vs. TrEMBL
Analysis Date: 2011-04-27 (Homology Analysis: Pisum sativum unigene v2 vs Trembl) Total hits: 2
BLAST of FG534142 vs. Lotus protein
Analysis Date: 2011-04-21 (Homology Analysis: Pisum sativum unigene v2 vs Lotus proteins) Total hits: 2
BLAST of FG534142 vs. Soybean peptides
Analysis Date: 2011-04-21 (Homology Analysis: Pisum sativum unigene v2 vs Soybean peptides) Total hits: 4
BLAST of FG534142 vs. Medicago proteins
Analysis Date: 2011-04-21 (Homology Analysis: Pisum sativum unigene v2 vs Medicago proteins) Total hits: 1
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FG534142 ID=FG534142; Name=FG534142; organism=Pisum sativum; type=EST; length=299bpback to top |