EX569898

EST Overview


Name	EX569898
Unique Name	EX569898
Type	EST
Organism	Pisum sativum (pea)
Sequence length	451

Libraries


Library Name	Type
LIBEST_021973 Pisum sativum shoot apical meristem ESTs	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Pisum sativum unigene v2	Pisum sativum unigene v2	EST
Pisum sativum unigene v1	Pisum sativum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Pisum sativum unigene v1	2010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide	2011-02-03
Pisum sativum unigene v2	2011-03-01
Homology Analysis: Pisum sativum unigene v2 vs TAIR 10 peptide	2011-04-21
Homology Analysis: Pisum sativum unigene v2 vs Trembl	2011-04-27
Homology Analysis: Pisum sativum unigene v2 vs Soybean peptides	2011-04-21
InterProScan analysis for Pisum sativum unigene v2	2011-04-27
InterProScan analysis for Pisum sativum unigene v1	2010-12-29

Homology

[Close]

BLAST of EX569898 vs. TrEMBL
Match: B9IBR0_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_730760 PE=4 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 4.231e-7
Identity = 26/34 (76.47%), Postives = 29/34 (85.29%), Query Frame = 3

Query:    3 EFSKIAMGTPDWDYYRVAAVQEKYMKDDESIDDD 104
            EFSKIA+   DWDYYRVAAVQEKYMKDDE+  +D
Sbjct:  267 EFSKIAVRPVDWDYYRVAAVQEKYMKDDENFGND 300

[Close]

BLAST of EX569898 vs. TAIR peptide
Match: AT5G22370.2 (| Symbols: EMB1705, QQT1 | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr5:7406587-7408509 FORWARD LENGTH=298)

HSP 1 Score: 51.2174 bits (121), Expect = 2.772e-7
Identity = 23/32 (71.88%), Postives = 27/32 (84.38%), Query Frame = 3

Query:    3 EFSKIAMGTPDWDYYRVAAVQEKYMKDDESID 98
            E+SKIA+G  DWDY RVAAVQEKYM+D+E  D
Sbjct:  267 EYSKIAIGQTDWDYNRVAAVQEKYMEDEEIQD 298

[Close]

BLAST of EX569898 vs. TAIR peptide
Match: AT5G22370.1 (| Symbols: EMB1705, QQT1 | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr5:7406587-7408509 FORWARD LENGTH=298)

HSP 1 Score: 51.2174 bits (121), Expect = 2.772e-7
Identity = 23/32 (71.88%), Postives = 27/32 (84.38%), Query Frame = 3

Query:    3 EFSKIAMGTPDWDYYRVAAVQEKYMKDDESID 98
            E+SKIA+G  DWDY RVAAVQEKYM+D+E  D
Sbjct:  267 EYSKIAIGQTDWDYNRVAAVQEKYMEDEEIQD 298

[Close]

Query:    3 EFSKIAMGTPDWDYYRVAAVQEKYMKDDESID 98
            E+SKIA+G  DWDY RVAAVQEKYM+D+E  D
Sbjct:  267 EYSKIAIGQTDWDYNRVAAVQEKYMEDEEIQD 298

[Close]

Query:    3 EFSKIAMGTPDWDYYRVAAVQEKYMKDDESID 98
            E+SKIA+G  DWDY RVAAVQEKYM+D+E  D
Sbjct:  267 EYSKIAIGQTDWDYNRVAAVQEKYMEDEEIQD 298

[Close]

BLAST of EX569898 vs. TrEMBL
Match: B9IBR0_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_730760 PE=4 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 5.290e-7
Identity = 26/34 (76.47%), Postives = 29/34 (85.29%), Query Frame = 3

Query:    3 EFSKIAMGTPDWDYYRVAAVQEKYMKDDESIDDD 104
            EFSKIA+   DWDYYRVAAVQEKYMKDDE+  +D
Sbjct:  267 EFSKIAVRPVDWDYYRVAAVQEKYMKDDENFGND 300

[Close]

BLAST of EX569898 vs. Soybean peptides
Match: Glyma04g04870.1|PACid:16254885 ()

HSP 1 Score: 63.1586 bits (152), Expect = 1.037e-10
Identity = 28/34 (82.35%), Postives = 32/34 (94.12%), Query Frame = 3

Query:    3 EFSKIAMGTPDWDYYRVAAVQEKYMKDDESIDDD 104
            EFSKIA+G  +WDYYRVAAVQEKYMKDDE+IDD+
Sbjct:  267 EFSKIAVGPVNWDYYRVAAVQEKYMKDDENIDDN 300

The following BLAST results are available for this feature:

BLAST of EX569898 vs. TrEMBL
BLAST of EX569898 vs. TAIR peptide
BLAST of EX569898 vs. TAIR peptide
BLAST of EX569898 vs. TrEMBL
BLAST of EX569898 vs. Soybean peptides

BLAST of EX569898 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 1


Match Name	E-value	Identity	Description
B9IBR0_POPTR	4.231e-7	76.47	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]

BLAST of EX569898 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 2


Match Name	E-value	Identity	Description
AT5G22370.2	2.772e-7	71.88	\| Symbols: EMB1705, QQT1 \| P-loop containing nucle...	[more]
AT5G22370.1	2.772e-7	71.88	\| Symbols: EMB1705, QQT1 \| P-loop containing nucle...	[more]

BLAST of EX569898 vs. TAIR peptide
Analysis Date: 2011-04-21 (Homology Analysis: Pisum sativum unigene v2 vs TAIR 10 peptide)
Total hits: 2


Match Name	E-value	Identity	Description
AT5G22370.2	2.772e-7	71.88	\| Symbols: EMB1705, QQT1 \| P-loop containing nucle...	[more]
AT5G22370.1	2.772e-7	71.88	\| Symbols: EMB1705, QQT1 \| P-loop containing nucle...	[more]

BLAST of EX569898 vs. TrEMBL
Analysis Date: 2011-04-27 (Homology Analysis: Pisum sativum unigene v2 vs Trembl)
Total hits: 1


Match Name	E-value	Identity	Description
B9IBR0_POPTR	5.290e-7	76.47	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]

BLAST of EX569898 vs. Soybean peptides
Analysis Date: 2011-04-21 (Homology Analysis: Pisum sativum unigene v2 vs Soybean peptides)
Total hits: 1


Match Name	E-value	Identity	Description
Glyma04g04870.1\|PACid:16254885	1.037e-10	82.35		[more]

InterPro

Analysis Name: InterProScan analysis for Pisum sativum unigene v2
Date Performed: 2011-04-27


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 14..28 score: NAcoord: 35..49 score

Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 14..28 score: NAcoord: 35..49 score

Properties


Property Name	Value
Singlet in analysis	Pisum sativum unigene v2
Singlet in analysis	Pisum sativum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EX569898 ID=EX569898; Name=EX569898; organism=Pisum sativum; type=EST; length=451bp
TTGAGTTTAGCAAGATTGCTATGGGAACTCCTGATTGGGATTATTATAGA
GTGGCAGCTGTGCAAGAGAAGTACATGAAGGATGATGAAAGTATTGATGA
TGATTGATGGGGAAATGCCGATTATTCTCTTGCAGCATTGCAAGATGCAA
GCTATTATTACAGTTTACGTATTTCTCATCCTTATGGTGTTAAAGATTTT
GAGAAGATGGGGAAGCAGCAGAGCTTTCAGTTAGTTTCTGTATTAGACTT
GACTAAGTTTGTATAGAGTCCTTCCTCCTTCTAGTGTAGTGTAGTTGTAA
ATTCTTGTGTTTGAGAGCCTTGCAACGTGTCATGGCTTTGACAATTATTT
TATCAACAGTGTAGCACAAGTGCTATATTTTTTTGGATTCTTGAGCATTT
GGTAGGGTGTTTGGTTTCTGGTTGGTGTATATGAAAAAAATATCTTTCAA
C

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