EX570971

EST Overview
NameEX570971
Unique NameEX570971
TypeEST
OrganismPisum sativum (pea)
Sequence length419
Libraries
Library NameType
LIBEST_021973 Pisum sativum shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v2Pisum sativum unigene v2EST
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
Pisum sativum unigene v22011-03-01
Homology Analysis: Pisum sativum unigene v2 vs Trembl2011-04-27
Homology Analysis: Pisum sativum unigene v2 vs Soybean peptides2011-04-21
Homology
BLAST of EX570971 vs. TrEMBL
Match: D7TQP7_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_40.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00025725001 PE=4 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.058e-10
Identity = 42/103 (40.78%), Postives = 58/103 (56.31%), Query Frame = 3
Query:    3 MVSHMSSIWDAEETCDAFSFKKDPIRHEDGPCFSLTAALDADKKVLERSFEN---LDKLSPEKESLVDDIAQTDHMPMDSCESGADIKYHLAKDFTGLADMYW 302
            +VSH  SIWDAEETCD FSF+K+P+ H++    S  A+  A +++   +      L +  P  E L+DD A  D   MD   S   +    AKD +GLAD+YW
Sbjct:  628 LVSHAPSIWDAEETCDGFSFQKNPVFHQEVLSSSKIASPGASEQIARINSVGSGCLIEELPNVERLLDDPAHGD--LMDDSPSDPHMLDSTAKDLSGLADIYW 728          
BLAST of EX570971 vs. TrEMBL
Match: B9S0I6_RICCO (DNA binding protein, putative OS=Ricinus communis GN=RCOM_1355220 PE=4 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 3.403e-9
Identity = 39/100 (39.00%), Postives = 52/100 (52.00%), Query Frame = 3
Query:    3 MVSHMSSIWDAEETCDAFSFKKDPIRHEDGPCFSLTAALDADKKVLERSFENLDKLSPEKESLVDDIAQTDHMPMDSCESGADIKYHLAKDFTGLADMYW 302
            + SH SSIWDAEETCDAF F+K+    ++ P    T+A+D+    +E+    L       E L          PMD C     +  + AKDFTGL D+YW
Sbjct:  581 LTSHTSSIWDAEETCDAFIFQKNRALRQENP----TSAVDS--AGIEQQTNKLTS-GTFVERLAGGDCPAAGDPMDECPPDLQVFSNSAKDFTGLTDIYW 673          
BLAST of EX570971 vs. TrEMBL
Match: B9IFP6_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1103893 PE=4 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 2.439e-7
Identity = 35/100 (35.00%), Postives = 50/100 (50.00%), Query Frame = 3
Query:    3 MVSHMSSIWDAEETCDAFSFKKDPIRHEDGPCFSLTAALDADKKVLERSFENLDKLSPEKESLVDDIAQTDHMPMDSCESGADIKYHLAKDFTGLADMYW 302
            + S+ SSIWD EETCDAF+F+K+    ++    S  A+      +    F  + +  P  E   D    T   PMD C S + +  +  KDF GL D+YW
Sbjct:  581 VASYTSSIWDGEETCDAFAFQKNHSLRKEVTTSSAVASPRKGGLIKGNVFTLVLQELPVIEGPND--YPTGGEPMDECSSDSQVVSNQVKDFNGLTDIYW 678          
BLAST of EX570971 vs. TrEMBL
Match: D7TQP7_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_40.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00025725001 PE=4 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.323e-10
Identity = 42/103 (40.78%), Postives = 58/103 (56.31%), Query Frame = 3
Query:    3 MVSHMSSIWDAEETCDAFSFKKDPIRHEDGPCFSLTAALDADKKVLERSFEN---LDKLSPEKESLVDDIAQTDHMPMDSCESGADIKYHLAKDFTGLADMYW 302
            +VSH  SIWDAEETCD FSF+K+P+ H++    S  A+  A +++   +      L +  P  E L+DD A  D   MD   S   +    AKD +GLAD+YW
Sbjct:  628 LVSHAPSIWDAEETCDGFSFQKNPVFHQEVLSSSKIASPGASEQIARINSVGSGCLIEELPNVERLLDDPAHGD--LMDDSPSDPHMLDSTAKDLSGLADIYW 728          
BLAST of EX570971 vs. TrEMBL
Match: B9S0I6_RICCO (DNA binding protein, putative OS=Ricinus communis GN=RCOM_1355220 PE=4 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 4.255e-9
Identity = 39/100 (39.00%), Postives = 52/100 (52.00%), Query Frame = 3
Query:    3 MVSHMSSIWDAEETCDAFSFKKDPIRHEDGPCFSLTAALDADKKVLERSFENLDKLSPEKESLVDDIAQTDHMPMDSCESGADIKYHLAKDFTGLADMYW 302
            + SH SSIWDAEETCDAF F+K+    ++ P    T+A+D+    +E+    L       E L          PMD C     +  + AKDFTGL D+YW
Sbjct:  581 LTSHTSSIWDAEETCDAFIFQKNRALRQENP----TSAVDS--AGIEQQTNKLTS-GTFVERLAGGDCPAAGDPMDECPPDLQVFSNSAKDFTGLTDIYW 673          
BLAST of EX570971 vs. TrEMBL
Match: B9IFP6_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1103893 PE=4 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 3.050e-7
Identity = 35/100 (35.00%), Postives = 50/100 (50.00%), Query Frame = 3
Query:    3 MVSHMSSIWDAEETCDAFSFKKDPIRHEDGPCFSLTAALDADKKVLERSFENLDKLSPEKESLVDDIAQTDHMPMDSCESGADIKYHLAKDFTGLADMYW 302
            + S+ SSIWD EETCDAF+F+K+    ++    S  A+      +    F  + +  P  E   D    T   PMD C S + +  +  KDF GL D+YW
Sbjct:  581 VASYTSSIWDGEETCDAFAFQKNHSLRKEVTTSSAVASPRKGGLIKGNVFTLVLQELPVIEGPND--YPTGGEPMDECSSDSQVVSNQVKDFNGLTDIYW 678          
BLAST of EX570971 vs. Soybean peptides
Match: Glyma16g23840.2|PACid:16302690 ()

HSP 1 Score: 147.132 bits (370), Expect = 4.581e-36
Identity = 69/100 (69.00%), Postives = 81/100 (81.00%), Query Frame = 3
Query:    3 MVSHMSSIWDAEETCDAFSFKKDPIRHEDGPCFSLTAALDADKKVLERSFENLDKLSPEKESLVDDIAQTDHMPMDSCESGADIKYHLAKDFTGLADMYW 302
            + SHMSSIWDAEETCDAF FKKDPI  E  PC S  A+L+++KKV +RSF+ LD+LSPE+E LVDD AQTD MPMDS ES AD++ HL KDF+ LADMYW
Sbjct:  594 LASHMSSIWDAEETCDAFLFKKDPILQEYRPCLSPVASLESEKKVTKRSFDKLDELSPERERLVDDCAQTDPMPMDSSESDADVQEHLGKDFSALADMYW 693          
BLAST of EX570971 vs. Soybean peptides
Match: Glyma16g23840.1|PACid:16302689 ()

HSP 1 Score: 147.132 bits (370), Expect = 4.581e-36
Identity = 69/100 (69.00%), Postives = 81/100 (81.00%), Query Frame = 3
Query:    3 MVSHMSSIWDAEETCDAFSFKKDPIRHEDGPCFSLTAALDADKKVLERSFENLDKLSPEKESLVDDIAQTDHMPMDSCESGADIKYHLAKDFTGLADMYW 302
            + SHMSSIWDAEETCDAF FKKDPI  E  PC S  A+L+++KKV +RSF+ LD+LSPE+E LVDD AQTD MPMDS ES AD++ HL KDF+ LADMYW
Sbjct:  608 LASHMSSIWDAEETCDAFLFKKDPILQEYRPCLSPVASLESEKKVTKRSFDKLDELSPERERLVDDCAQTDPMPMDSSESDADVQEHLGKDFSALADMYW 707          
BLAST of EX570971 vs. Soybean peptides
Match: Glyma02g05420.1|PACid:16247070 ()

HSP 1 Score: 146.747 bits (369), Expect = 5.983e-36
Identity = 70/100 (70.00%), Postives = 81/100 (81.00%), Query Frame = 3
Query:    3 MVSHMSSIWDAEETCDAFSFKKDPIRHEDGPCFSLTAALDADKKVLERSFENLDKLSPEKESLVDDIAQTDHMPMDSCESGADIKYHLAKDFTGLADMYW 302
            + SHMSSIWDAEETCDAF FKKDPI HED P  S  A+L+++KKV +RSF+ LD+LSPE+E LVDD AQTD  PMDS ES ADI+ HL KDF+ LADMYW
Sbjct:  658 LASHMSSIWDAEETCDAFLFKKDPILHEDHPRLSPVASLESEKKVTKRSFDKLDELSPERERLVDDCAQTDPNPMDSSESDADIQEHLGKDFSALADMYW 757          
The following BLAST results are available for this feature:
BLAST of EX570971 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 3
Match NameE-valueIdentityDescription
D7TQP7_VITVI1.058e-1040.78Whole genome shotgun sequence of line PN40024, sca... [more]
B9S0I6_RICCO3.403e-939.00DNA binding protein, putative OS=Ricinus communis ... [more]
B9IFP6_POPTR2.439e-735.00Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
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BLAST of EX570971 vs. TrEMBL
Analysis Date: 2011-04-27 (Homology Analysis: Pisum sativum unigene v2 vs Trembl)
Total hits: 3
Match NameE-valueIdentityDescription
D7TQP7_VITVI1.323e-1040.78Whole genome shotgun sequence of line PN40024, sca... [more]
B9S0I6_RICCO4.255e-939.00DNA binding protein, putative OS=Ricinus communis ... [more]
B9IFP6_POPTR3.050e-735.00Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
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BLAST of EX570971 vs. Soybean peptides
Analysis Date: 2011-04-21 (Homology Analysis: Pisum sativum unigene v2 vs Soybean peptides)
Total hits: 3
Match NameE-valueIdentityDescription
Glyma16g23840.2|PACid:163026904.581e-3669.00[more]
Glyma16g23840.1|PACid:163026894.581e-3669.00[more]
Glyma02g05420.1|PACid:162470705.983e-3670.00[more]
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Properties
Property NameValue
Singlet in analysisPisum sativum unigene v2
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>EX570971 ID=EX570971; Name=EX570971; organism=Pisum sativum; type=EST; length=419bp
CTATGGTATCTCATATGTCATCCATCTGGGATGCTGAAGAAACCTGTGAT
GCTTTCTCATTTAAAAAAGATCCTATTCGTCATGAAGACGGTCCTTGTTT
TTCTCTCACTGCTGCTTTAGATGCTGATAAAAAGGTTCTTGAAAGAAGCT
TTGAGAATTTGGATAAGCTTTCACCTGAAAAAGAGAGCCTTGTGGATGAT
ATTGCTCAAACAGACCATATGCCTATGGACAGTTGCGAGTCTGGTGCAGA
TATCAAGTATCATTTAGCAAAGGATTTTACTGGGCTAGCAGATATGTATT
GGGTACTTTCATTTCTATACTCCTTTTTGCTGTTTTGATTTTCTTGCGGC
AAGACAATTTGGAGGAAGTTTATCTCTGGCAGTTGTCACAAACATATTTG
TAATACTTCGAACAAGCTT
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