AM161869

EST Overview
NameAM161869
Unique NameAM161869
TypeEST
OrganismPisum sativum (pea)
Sequence length446
Libraries
Library NameType
LIBEST_019360 Pisum sativum leaf vegetativecdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Pisum sativum unigene v12010-12-29
Homology
BLAST of AM161869 vs. TrEMBL
Match: D7TBH1_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_16.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00015308001 PE=4 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 8.822e-21
Identity = 45/62 (72.58%), Postives = 50/62 (80.65%), Query Frame = 3
Query:  261 YEGDSNSNKADVTAAREKCVGRNNKGVSWGYTSVIGRRNEMEDDVAVIPGFLSRTCDHVGGC 446
            Y G S        AAREKCVGRNNKGV+WG+TSVIGRR EMED VAV+PGF+SRTCDH+GGC
Sbjct:    9 YSGGSGGETTVTVAAREKCVGRNNKGVTWGFTSVIGRRREMEDAVAVVPGFMSRTCDHIGGC 70          
BLAST of AM161869 vs. TrEMBL
Match: A5ANW9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_042313 PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 8.822e-21
Identity = 45/62 (72.58%), Postives = 50/62 (80.65%), Query Frame = 3
Query:  261 YEGDSNSNKADVTAAREKCVGRNNKGVSWGYTSVIGRRNEMEDDVAVIPGFLSRTCDHVGGC 446
            Y G S        AAREKCVGRNNKGV+WG+TSVIGRR EMED VAV+PGF+SRTCDH+GGC
Sbjct:  290 YSGGSGGETTVTVAAREKCVGRNNKGVTWGFTSVIGRRREMEDAVAVVPGFMSRTCDHIGGC 351          
BLAST of AM161869 vs. TrEMBL
Match: B9NAR1_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_674974 PE=4 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.840e-18
Identity = 42/51 (82.35%), Postives = 45/51 (88.24%), Query Frame = 3
Query:  294 VTAAREKCVGRNNKGVSWGYTSVIGRRNEMEDDVAVIPGFLSRTCDHVGGC 446
            +   REKCVGRNNKGVSWGYTSVIGRR EMED VAVIP F+SRTC+HVGGC
Sbjct:   74 IVTEREKCVGRNNKGVSWGYTSVIGRRKEMEDAVAVIPSFMSRTCNHVGGC 124          
BLAST of AM161869 vs. TrEMBL
Match: B9NAR0_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1118689 PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.840e-18
Identity = 42/51 (82.35%), Postives = 45/51 (88.24%), Query Frame = 3
Query:  294 VTAAREKCVGRNNKGVSWGYTSVIGRRNEMEDDVAVIPGFLSRTCDHVGGC 446
            +   REKCVGRNNKGVSWGYTSVIGRR EMED VAVIP F+SRTC+HVGGC
Sbjct:    3 IVTEREKCVGRNNKGVSWGYTSVIGRRKEMEDAVAVIPSFMSRTCNHVGGC 53          
BLAST of AM161869 vs. TrEMBL
Match: B9RKI2_RICCO (Protein phosphatase 2c, putative OS=Ricinus communis GN=RCOM_1049690 PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 7.728e-17
Identity = 39/46 (84.78%), Postives = 43/46 (93.48%), Query Frame = 3
Query:  309 EKCVGRNNKGVSWGYTSVIGRRNEMEDDVAVIPGFLSRTCDHVGGC 446
            EKCVG+NN+GVSWG+TSVIGRR EMED VAVIPGF+SRTC HVGGC
Sbjct:   95 EKCVGKNNRGVSWGFTSVIGRRGEMEDSVAVIPGFVSRTCYHVGGC 140          
BLAST of AM161869 vs. TrEMBL
Match: O82468_MESCR (Protein phosphatase-2C OS=Mesembryanthemum crystallinum GN=PP2C PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.277e-11
Identity = 35/50 (70.00%), Postives = 40/50 (80.00%), Query Frame = 3
Query:  297 TAAREKCVGRNNKGVSWGYTSVIGRRNEMEDDVAVIPGFLSRTCDHVGGC 446
            T ARE+CVGR ++ VSWG TSVIGRR EMED +AV P F+S TC HVGGC
Sbjct:   71 TPARERCVGRPDR-VSWGSTSVIGRRAEMEDAIAVAPEFISPTCGHVGGC 119          
BLAST of AM161869 vs. TrEMBL
Match: D7U0B5_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_2.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00016988001 PE=4 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 9.151e-10
Identity = 29/58 (50.00%), Postives = 42/58 (72.41%), Query Frame = 3
Query:  273 SNSNKADVTAAREKCVGRNNKGVSWGYTSVIGRRNEMEDDVAVIPGFLSRTCDHVGGC 446
            SNS+ A   +    CVG++NK VSWG +S +G+R+ MED +A++PGF+S +C  VGGC
Sbjct:   53 SNSSLAAGGSGVPTCVGKDNKKVSWGRSSDVGKRSGMEDSLAIVPGFMSLSCKQVGGC 110          
BLAST of AM161869 vs. TrEMBL
Match: D7U0C0_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_2.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00016995001 PE=4 SV=1)

HSP 1 Score: 65.0846 bits (157), Expect = 2.662e-9
Identity = 28/57 (49.12%), Postives = 41/57 (71.93%), Query Frame = 3
Query:  276 NSNKADVTAAREKCVGRNNKGVSWGYTSVIGRRNEMEDDVAVIPGFLSRTCDHVGGC 446
            NS+ A   +    CVG++NK VSWG +S +G+R+ MED +A++PGF+S +C  VGGC
Sbjct:   54 NSSLAAGGSGVPTCVGKDNKKVSWGRSSDVGKRSGMEDSLAIVPGFMSLSCKQVGGC 110          
BLAST of AM161869 vs. TrEMBL
Match: Q1EP37_MUSBA (Protein phosphatase 2C, putative OS=Musa balbisiana GN=MBP_91N22.32 PE=3 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 3.255e-7
Identity = 27/50 (54.00%), Postives = 33/50 (66.00%), Query Frame = 3
Query:  303 AREKCVGRNN--KGVSWGYTSVIGRRNEMEDDVAVIPGFLSRTCDHVGGC 446
            AR +C+ R      VSWG  S +GRR EMED VAV P F++ TC+ VGGC
Sbjct:   41 ARGRCLWRKGGAAAVSWGAASTVGRRKEMEDAVAVAPAFMALTCERVGGC 90          
The following BLAST results are available for this feature:
BLAST of AM161869 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 9
Match NameE-valueIdentityDescription
D7TBH1_VITVI8.822e-2172.58Whole genome shotgun sequence of line PN40024, sca... [more]
A5ANW9_VITVI8.822e-2172.58Putative uncharacterized protein OS=Vitis vinifera... [more]
B9NAR1_POPTR1.840e-1882.35Predicted protein (Fragment) OS=Populus trichocarp... [more]
B9NAR0_POPTR1.840e-1882.35Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9RKI2_RICCO7.728e-1784.78Protein phosphatase 2c, putative OS=Ricinus commun... [more]
O82468_MESCR1.277e-1170.00Protein phosphatase-2C OS=Mesembryanthemum crystal... [more]
D7U0B5_VITVI9.151e-1050.00Whole genome shotgun sequence of line PN40024, sca... [more]
D7U0C0_VITVI2.662e-949.12Whole genome shotgun sequence of line PN40024, sca... [more]
Q1EP37_MUSBA3.255e-754.00Protein phosphatase 2C, putative OS=Musa balbisian... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 20..32
score: NAcoord: 43..59
score
NoneNo IPR availableSEGsegsegcoord: 22..43
score
NoneNo IPR availableSEGsegsegcoord: 41..60
score

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>AM161869 ID=AM161869; Name=AM161869; organism=Pisum sativum; type=EST; length=446bp
CTCCTCTCTCTTTCAAACTCAACCACTGCTACTGAGTTATGGAGCGTTTG
GACGATTCAGAAGAGCAACTCGAACGAGTTGACTCTGATCAGTTAACATT
GACAAGCTCTGGTTCAGGCATTTCGTCTATATTCAGCGCTGACGATTTCC
GTAACTTCAACGGTTCCGGTGACATTTCCTCTATCAGCAGTGGCTCAGGT
GAGATTCCGATATTTACGGTGAATCGAGTGATTCTTGCACCTTCGTTGAT
CGCTGAGAAGTATGAAGGTGACAGCAACAGCAACAAGGCTGACGTGACGG
CGGCGAGGGAGAAGTGCGTCGGAAGGAACAACAAGGGAGTGAGTTGGGGA
TATACTTCAGTGATTGGGAGACGGAACGAAATGGAGGATGATGTAGCTGT
TATTCCAGGATTTTTATCACGCACTTGCGATCACGTTGGTGGTTGT
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