CD860413

EST Overview


Name	CD860413
Unique Name	CD860413
Type	EST
Organism	Pisum sativum (pea)
Sequence length	329

Libraries


Library Name	Type
LIBEST_014003 TE	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Pisum sativum unigene v1	Pisum sativum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Pisum sativum unigene v1	2010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide	2011-02-03
InterProScan analysis for Pisum sativum unigene v1	2010-12-29

Homology

[Close]

BLAST of CD860413 vs. TrEMBL
Match: C6TCZ1_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 3.055e-21
Identity = 46/61 (75.41%), Postives = 56/61 (91.80%), Query Frame = 1

Query:    1 MKLTTLPDGCAIKRVQANRTNCLAEESSCIWKNGKIIQEMILRLRNVESGELVVEIEWVDI 183
            M L  LP+GC++KR+Q +RTNCLAEESSCIW+NGKI+QEM LRLRNVESGE++VEIEWVD+
Sbjct:  109 MGLGKLPNGCSLKRIQPDRTNCLAEESSCIWQNGKIVQEMFLRLRNVESGEILVEIEWVDV 169

[Close]

BLAST of CD860413 vs. TrEMBL
Match: C6SXX9_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 5.762e-20
Identity = 45/61 (73.77%), Postives = 55/61 (90.16%), Query Frame = 1

Query:    1 MKLTTLPDGCAIKRVQANRTNCLAEESSCIWKNGKIIQEMILRLRNVESGELVVEIEWVDI 183
            M L  LP+GC++KR+Q +RTN LAEESSCIW+NGKI+QEM LRLRNVESGE++VEIEWVD+
Sbjct:  109 MGLGKLPNGCSLKRIQPDRTNYLAEESSCIWQNGKIVQEMFLRLRNVESGEILVEIEWVDV 169

[Close]

BLAST of CD860413 vs. TrEMBL
Match: B9SP79_RICCO (ARF GTPase activator, putative OS=Ricinus communis GN=RCOM_0630050 PE=4 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 7.788e-17
Identity = 38/62 (61.29%), Postives = 50/62 (80.65%), Query Frame = 1

Query:    1 MKLTTLPDGCAIKRVQANRTNCLAEESSCIWKNGKIIQEMILRLRNVESGELVVEIEWVDIP 186
            M L TLP+GC + RVQ ++ NCLA+ES  +W NGKI Q+M LRLRNVESGE+ V++EW+D+P
Sbjct:   99 MGLQTLPNGCVVSRVQPSKDNCLADESCIVWNNGKITQDMHLRLRNVESGEVEVQVEWIDVP 160

[Close]

BLAST of CD860413 vs. TrEMBL
Match: B9HW51_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_658758 PE=4 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.017e-16
Identity = 36/62 (58.06%), Postives = 52/62 (83.87%), Query Frame = 1

Query:    1 MKLTTLPDGCAIKRVQANRTNCLAEESSCIWKNGKIIQEMILRLRNVESGELVVEIEWVDIP 186
            M L  LP+GC + R++ +R NCLA+ES  +W NGKI+Q+MILRLRNVESGE++++IEW+++P
Sbjct:   99 MGLQNLPNGCVVSRIKPSRNNCLADESCVVWDNGKILQDMILRLRNVESGEVMIQIEWMNVP 160

[Close]

BLAST of CD860413 vs. TrEMBL
Match: D7T8Q5_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_11.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00011712001 PE=4 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.735e-16
Identity = 40/62 (64.52%), Postives = 49/62 (79.03%), Query Frame = 1

Query:    1 MKLTTLPDGCAIKRVQANRTNCLAEESSCIWKNGKIIQEMILRLRNVESGELVVEIEWVDIP 186
            M L  LP G  I RVQ +RTNCLA+ES C+W NGKI Q+M+LRLRNVE GE+ V+IEW++IP
Sbjct:   66 MGLENLPTGTVISRVQPSRTNCLADESCCVWDNGKIRQDMLLRLRNVECGEVEVQIEWINIP 127

[Close]

BLAST of CD860413 vs. TrEMBL
Match: A5BXZ0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_043576 PE=4 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.735e-16
Identity = 40/62 (64.52%), Postives = 49/62 (79.03%), Query Frame = 1

Query:    1 MKLTTLPDGCAIKRVQANRTNCLAEESSCIWKNGKIIQEMILRLRNVESGELVVEIEWVDIP 186
            M L  LP G  I RVQ +RTNCLA+ES C+W NGKI Q+M+LRLRNVE GE+ V+IEW++IP
Sbjct:   99 MGLENLPTGTVISRVQPSRTNCLADESCCVWDNGKIRQDMLLRLRNVECGEVEVQIEWINIP 160

[Close]

BLAST of CD860413 vs. TrEMBL
Match: Q9S7J9_ARATH (At1g70790 OS=Arabidopsis thaliana GN=F15H11.4 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 6.593e-16
Identity = 39/57 (68.42%), Postives = 47/57 (82.46%), Query Frame = 1

Query:   16 LPDGCAIKRVQANRTNCLAEESSCIWKNGKIIQEMILRLRNVESGELVVEIEWVDIP 186
            LP+GCAIKR++  RTNCLAEESS  W NGKI+QEMILRL+NVE GE+ + +EW D P
Sbjct:  107 LPNGCAIKRIRPGRTNCLAEESSITWSNGKIMQEMILRLKNVECGEVELMLEWTDGP 163

[Close]

BLAST of CD860413 vs. TrEMBL
Match: B9HJD0_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_820673 PE=4 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 6.593e-16
Identity = 36/62 (58.06%), Postives = 49/62 (79.03%), Query Frame = 1

Query:    1 MKLTTLPDGCAIKRVQANRTNCLAEESSCIWKNGKIIQEMILRLRNVESGELVVEIEWVDIP 186
            M L  LP GC + RVQ ++ NCLA+ES  +W +GK+ Q+MILRLRNVESGE+ ++IEW+D+P
Sbjct:   99 MGLQNLPKGCVVSRVQPSQNNCLADESCIVWDDGKLHQDMILRLRNVESGEVTIQIEWIDVP 160

[Close]

BLAST of CD860413 vs. TrEMBL
Match: D7KYE5_ARALY (C2 domain-containing protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_476210 PE=4 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.125e-15
Identity = 39/57 (68.42%), Postives = 46/57 (80.70%), Query Frame = 1

Query:   16 LPDGCAIKRVQANRTNCLAEESSCIWKNGKIIQEMILRLRNVESGELVVEIEWVDIP 186
            LP+GCAIKR++  RTNCLAEESS  W NGKI QEMILRL+NVE GE+ + +EW D P
Sbjct:  107 LPNGCAIKRIRPGRTNCLAEESSITWSNGKIKQEMILRLKNVECGEVEIMLEWTDGP 163

[Close]

BLAST of CD860413 vs. TrEMBL
Match: D7TSQ0_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_6.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00030815001 PE=4 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 1.918e-15
Identity = 37/62 (59.68%), Postives = 48/62 (77.42%), Query Frame = 1

Query:    1 MKLTTLPDGCAIKRVQANRTNCLAEESSCIWKNGKIIQEMILRLRNVESGELVVEIEWVDIP 186
            M+L  LP G  I RVQ NR NCLAEES  IW  GK++Q ++LRLRNVESGE+ ++++W+DIP
Sbjct:   99 MELNGLPSGTIITRVQPNRENCLAEESCIIWTEGKVVQNLVLRLRNVESGEVELQLQWIDIP 160

[Close]

BLAST of CD860413 vs. TAIR peptide
Match: AT1G70790.1 (| Symbols: | Calcium-dependent lipid-binding (CaLB domain) family protein | chr1:26700724-26702127 FORWARD LENGTH=185)

HSP 1 Score: 87.0409 bits (214), Expect = 2.536e-18
Identity = 39/57 (68.42%), Postives = 47/57 (82.46%), Query Frame = 1

Query:   16 LPDGCAIKRVQANRTNCLAEESSCIWKNGKIIQEMILRLRNVESGELVVEIEWVDIP 186
            LP+GCAIKR++  RTNCLAEESS  W NGKI+QEMILRL+NVE GE+ + +EW D P
Sbjct:  107 LPNGCAIKRIRPGRTNCLAEESSITWSNGKIMQEMILRLKNVECGEVELMLEWTDGP 163

[Close]

BLAST of CD860413 vs. TAIR peptide
Match: AT1G70790.2 (| Symbols: | Calcium-dependent lipid-binding (CaLB domain) family protein | chr1:26700724-26702127 FORWARD LENGTH=185)

HSP 1 Score: 87.0409 bits (214), Expect = 2.536e-18
Identity = 39/57 (68.42%), Postives = 47/57 (82.46%), Query Frame = 1

Query:   16 LPDGCAIKRVQANRTNCLAEESSCIWKNGKIIQEMILRLRNVESGELVVEIEWVDIP 186
            LP+GCAIKR++  RTNCLAEESS  W NGKI+QEMILRL+NVE GE+ + +EW D P
Sbjct:  107 LPNGCAIKRIRPGRTNCLAEESSITWSNGKIMQEMILRLKNVECGEVELMLEWTDGP 163

[Close]

BLAST of CD860413 vs. TAIR peptide
Match: AT2G01540.1 (| Symbols: | Calcium-dependent lipid-binding (CaLB domain) family protein | chr2:242297-243233 REVERSE LENGTH=180)

HSP 1 Score: 82.8037 bits (203), Expect = 4.783e-17
Identity = 36/58 (62.07%), Postives = 47/58 (81.03%), Query Frame = 1

Query:    1 MKLTTLPDGCAIKRVQANRTNCLAEESSCIWKNGKIIQEMILRLRNVESGELVVEIEW 174
            M+L  LP+GCAIKRVQ +R NCL++ESS +W NGKI Q++ILRL NVE GE+ + +EW
Sbjct:  102 MELLRLPNGCAIKRVQPSRHNCLSDESSIVWNNGKITQDLILRLNNVECGEIEIMLEW 159

[Close]

BLAST of CD860413 vs. TAIR peptide
Match: AT1G70810.1 (| Symbols: | Calcium-dependent lipid-binding (CaLB domain) family protein | chr1:26704207-26705091 FORWARD LENGTH=165)

HSP 1 Score: 82.0333 bits (201), Expect = 8.159e-17
Identity = 39/62 (62.90%), Postives = 46/62 (74.19%), Query Frame = 1

Query:    1 MKLTTLPDGCAIKRVQANRTNCLAEESSCIWKNGKIIQEMILRLRNVESGELVVEIEWVDIP 186
            M L  LPDG  IKRV  NR NCLAE SS +  NGKI+Q MIL LRNVE GE+ +++EW+DIP
Sbjct:   99 MGLQELPDGTEIKRVVPNRENCLAEASSIVSNNGKIVQNMILLLRNVECGEVEIQLEWIDIP 160

[Close]

BLAST of CD860413 vs. TAIR peptide
Match: AT1G48590.3 (| Symbols: | Calcium-dependent lipid-binding (CaLB domain) family protein | chr1:17962886-17964274 FORWARD LENGTH=168)

HSP 1 Score: 75.485 bits (184), Expect = 7.637e-15
Identity = 31/62 (50.00%), Postives = 46/62 (74.19%), Query Frame = 1

Query:    1 MKLTTLPDGCAIKRVQANRTNCLAEESSCIWKNGKIIQEMILRLRNVESGELVVEIEWVDIP 186
            M L  LP G  +  VQ +R NCLAEES  IW +GK++Q+++LRLR+VE GE+  +++W+D+P
Sbjct:  103 MHLHDLPSGTIVTTVQPSRDNCLAEESRVIWSDGKLVQDIVLRLRHVECGEVEAQLQWIDLP 164

[Close]

BLAST of CD860413 vs. TAIR peptide
Match: AT1G48590.2 (| Symbols: | Calcium-dependent lipid-binding (CaLB domain) family protein | chr1:17962886-17964274 FORWARD LENGTH=200)

HSP 1 Score: 75.485 bits (184), Expect = 7.637e-15
Identity = 31/62 (50.00%), Postives = 46/62 (74.19%), Query Frame = 1

Query:    1 MKLTTLPDGCAIKRVQANRTNCLAEESSCIWKNGKIIQEMILRLRNVESGELVVEIEWVDIP 186
            M L  LP G  +  VQ +R NCLAEES  IW +GK++Q+++LRLR+VE GE+  +++W+D+P
Sbjct:  135 MHLHDLPSGTIVTTVQPSRDNCLAEESRVIWSDGKLVQDIVLRLRHVECGEVEAQLQWIDLP 196

[Close]

BLAST of CD860413 vs. TAIR peptide
Match: AT1G48590.1 (| Symbols: | Calcium-dependent lipid-binding (CaLB domain) family protein | chr1:17962979-17964274 FORWARD LENGTH=169)

HSP 1 Score: 75.485 bits (184), Expect = 7.637e-15
Identity = 31/62 (50.00%), Postives = 46/62 (74.19%), Query Frame = 1

Query:    1 MKLTTLPDGCAIKRVQANRTNCLAEESSCIWKNGKIIQEMILRLRNVESGELVVEIEWVDIP 186
            M L  LP G  +  VQ +R NCLAEES  IW +GK++Q+++LRLR+VE GE+  +++W+D+P
Sbjct:  104 MHLHDLPSGTIVTTVQPSRDNCLAEESRVIWSDGKLVQDIVLRLRHVECGEVEAQLQWIDLP 165

[Close]

BLAST of CD860413 vs. TAIR peptide
Match: AT1G66360.1 (| Symbols: | Calcium-dependent lipid-binding (CaLB domain) family protein | chr1:24751431-24752607 FORWARD LENGTH=174)

HSP 1 Score: 75.485 bits (184), Expect = 7.637e-15
Identity = 30/60 (50.00%), Postives = 46/60 (76.67%), Query Frame = 1

Query:    4 KLTTLPDGCAIKRVQANRTNCLAEESSCIWKNGKIIQEMILRLRNVESGELVVEIEWVDI 183
            +L  LP+G  I ++QA+R NCL+EES  +W  GKI+Q M L+L+NVE GE+ +++EW+D+
Sbjct:  102 QLGGLPEGTVIMKIQASRQNCLSEESKIVWHKGKIVQNMFLKLQNVERGEIELQLEWIDV 161

[Close]

BLAST of CD860413 vs. TAIR peptide
Match: AT1G73580.1 (| Symbols: | Calcium-dependent lipid-binding (CaLB domain) family protein | chr1:27654841-27655518 FORWARD LENGTH=168)

HSP 1 Score: 73.1738 bits (178), Expect = 3.790e-14
Identity = 32/62 (51.61%), Postives = 45/62 (72.58%), Query Frame = 1

Query:    1 MKLTTLPDGCAIKRVQANRTNCLAEESSCIWKNGKIIQEMILRLRNVESGELVVEIEWVDIP 186
            M+L+ LPDG  I  +  +R NCLAEES   W N +I+Q + LRLRNVE GE+ +E++W+D+P
Sbjct:  102 MELSGLPDGTIISTIGPSRGNCLAEESYIRWINDRIVQHICLRLRNVERGEVEIELQWIDLP 163

[Close]

BLAST of CD860413 vs. TAIR peptide
Match: AT3G17980.1 (| Symbols: | Calcium-dependent lipid-binding (CaLB domain) family protein | chr3:6152417-6153115 FORWARD LENGTH=177)

HSP 1 Score: 72.4034 bits (176), Expect = 6.465e-14
Identity = 29/62 (46.77%), Postives = 46/62 (74.19%), Query Frame = 1

Query:    1 MKLTTLPDGCAIKRVQANRTNCLAEESSCIWKNGKIIQEMILRLRNVESGELVVEIEWVDIP 186
            M+L  LP G  +  V+ +R NCLAEES   W +GK++Q+++LRLR+VE GE+  +++W+D+P
Sbjct:  111 MQLDGLPSGTIVTTVKPSRRNCLAEESRVTWVDGKLVQDLVLRLRHVECGEVEAQLQWIDLP 172

The following BLAST results are available for this feature:

BLAST of CD860413 vs. TrEMBL
BLAST of CD860413 vs. TAIR peptide

BLAST of CD860413 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
C6TCZ1_SOYBN	3.055e-21	75.41	Putative uncharacterized protein OS=Glycine max PE...	[more]
C6SXX9_SOYBN	5.762e-20	73.77	Putative uncharacterized protein OS=Glycine max PE...	[more]
B9SP79_RICCO	7.788e-17	61.29	ARF GTPase activator, putative OS=Ricinus communis...	[more]
B9HW51_POPTR	1.017e-16	58.06	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
D7T8Q5_VITVI	1.735e-16	64.52	Whole genome shotgun sequence of line PN40024, sca...	[more]
A5BXZ0_VITVI	1.735e-16	64.52	Putative uncharacterized protein OS=Vitis vinifera...	[more]
Q9S7J9_ARATH	6.593e-16	68.42	At1g70790 OS=Arabidopsis thaliana GN=F15H11.4 PE=2...	[more]
B9HJD0_POPTR	6.593e-16	58.06	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
D7KYE5_ARALY	1.125e-15	68.42	C2 domain-containing protein OS=Arabidopsis lyrata...	[more]
D7TSQ0_VITVI	1.918e-15	59.68	Whole genome shotgun sequence of line PN40024, sca...	[more]

BLAST of CD860413 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 10


Match Name	E-value	Identity	Description
AT1G70790.1	2.536e-18	68.42	\| Symbols: \| Calcium-dependent lipid-binding (CaL...	[more]
AT1G70790.2	2.536e-18	68.42	\| Symbols: \| Calcium-dependent lipid-binding (CaL...	[more]
AT2G01540.1	4.783e-17	62.07	\| Symbols: \| Calcium-dependent lipid-binding (CaL...	[more]
AT1G70810.1	8.159e-17	62.90	\| Symbols: \| Calcium-dependent lipid-binding (CaL...	[more]
AT1G48590.3	7.637e-15	50.00	\| Symbols: \| Calcium-dependent lipid-binding (CaL...	[more]
AT1G48590.2	7.637e-15	50.00	\| Symbols: \| Calcium-dependent lipid-binding (CaL...	[more]
AT1G48590.1	7.637e-15	50.00	\| Symbols: \| Calcium-dependent lipid-binding (CaL...	[more]
AT1G66360.1	7.637e-15	50.00	\| Symbols: \| Calcium-dependent lipid-binding (CaL...	[more]
AT1G73580.1	3.790e-14	51.61	\| Symbols: \| Calcium-dependent lipid-binding (CaL...	[more]
AT3G17980.1	6.465e-14	46.77	\| Symbols: \| Calcium-dependent lipid-binding (CaL...	[more]

InterPro

Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR23180	CENTAURIN/ARF	coord: 1..62 score: 6.5
None	No IPR available	PANTHER	PTHR23180:SF5	CENTAURIN/ARF-RELATED	coord: 1..62 score: 6.5

Properties


Property Name	Value
Singlet in analysis	Pisum sativum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CD860413 ID=CD860413; Name=CD860413; organism=Pisum sativum; type=EST; length=329bp
ATGAAGTTGACCACTCTTCCGGATGGTTGTGCAATCAAAAGGGTTCAAGC
AAATAGGACTAATTGTCTTGCTGAAGAGAGTAGTTGTATTTGGAAAAATG
GAAAGATAATCCAAGAAATGATTCTAAGATTGAGAAATGTTGAGAGTGGA
GAATTGGTTGTGGAAATTGAATGGGTGGATATTCCTGGTAGCACAGGTTT
ATTAGGGGGAAAAAGTTAAATTATCCTCCTTTCAATAACAATCAACAAAG
TCTTATTGTATTAGGTGAGTTTGATACATGAATAAAACTATGTCATAAAT
TCATAAAGAATTTATATCTTGACTTTATG

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