EX570094

EST Overview


Name	EX570094
Unique Name	EX570094
Type	EST
Organism	Pisum sativum (pea)
Sequence length	163

Libraries


Library Name	Type
LIBEST_021973 Pisum sativum shoot apical meristem ESTs	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Pisum sativum unigene v1	Pisum sativum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Pisum sativum unigene v1	2010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide	2011-02-03
InterProScan analysis for Pisum sativum unigene v1	2010-12-29

Homology

[Close]

BLAST of EX570094 vs. TrEMBL
Match: Q84VL0_ARALY (Putative antigen receptor (Fragment) OS=Arabidopsis lyrata GN=At1g65420 PE=4 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.143e-20
Identity = 50/52 (96.15%), Postives = 52/52 (100.00%), Query Frame = 3

Query:    3 RKNFPMKIFLVLLGFYTANALATILGQTGDWDVLVAGIVVAAIEGIGMLIYK 158
            RKNFPMKIFL+LLGFYTANALATILGQTGDWDVLVAGIVVAAIEGIGML+YK
Sbjct:   16 RKNFPMKIFLLLLGFYTANALATILGQTGDWDVLVAGIVVAAIEGIGMLMYK 67

[Close]

BLAST of EX570094 vs. TrEMBL
Match: Q84K02_ARATH (Putative antigen receptor (Fragment) OS=Arabidopsis thaliana GN=At1g65420 PE=4 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.143e-20
Identity = 50/52 (96.15%), Postives = 52/52 (100.00%), Query Frame = 3

Query:    3 RKNFPMKIFLVLLGFYTANALATILGQTGDWDVLVAGIVVAAIEGIGMLIYK 158
            RKNFPMKIFL+LLGFYTANALATILGQTGDWDVLVAGIVVAAIEGIGML+YK
Sbjct:   16 RKNFPMKIFLLLLGFYTANALATILGQTGDWDVLVAGIVVAAIEGIGMLMYK 67

[Close]

BLAST of EX570094 vs. TrEMBL
Match: D7U6I2_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_207.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00003760001 PE=4 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.143e-20
Identity = 48/52 (92.31%), Postives = 52/52 (100.00%), Query Frame = 3

Query:    3 RKNFPMKIFLVLLGFYTANALATILGQTGDWDVLVAGIVVAAIEGIGMLIYK 158
            RKNFPMK+FL+LLGFYTANALATILGQTGDWDVLVAG+VVAAIEGIGML+YK
Sbjct:  137 RKNFPMKVFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEGIGMLVYK 188

[Close]

BLAST of EX570094 vs. TrEMBL
Match: D7KRV4_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_894093 PE=4 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.143e-20
Identity = 50/52 (96.15%), Postives = 52/52 (100.00%), Query Frame = 3

Query:    3 RKNFPMKIFLVLLGFYTANALATILGQTGDWDVLVAGIVVAAIEGIGMLIYK 158
            RKNFPMKIFL+LLGFYTANALATILGQTGDWDVLVAGIVVAAIEGIGML+YK
Sbjct:  109 RKNFPMKIFLLLLGFYTANALATILGQTGDWDVLVAGIVVAAIEGIGMLMYK 160

[Close]

BLAST of EX570094 vs. TrEMBL
Match: B9HHY4_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_564111 PE=4 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.143e-20
Identity = 50/52 (96.15%), Postives = 52/52 (100.00%), Query Frame = 3

Query:    3 RKNFPMKIFLVLLGFYTANALATILGQTGDWDVLVAGIVVAAIEGIGMLIYK 158
            RKNFPMKIFL+LLGFYTANALATILGQTGDWDVLVAGIVVAAIEGIGML+YK
Sbjct:  125 RKNFPMKIFLLLLGFYTANALATILGQTGDWDVLVAGIVVAAIEGIGMLMYK 176

[Close]

BLAST of EX570094 vs. TrEMBL
Match: B9RM29_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1077390 PE=4 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.493e-20
Identity = 49/52 (94.23%), Postives = 52/52 (100.00%), Query Frame = 3

Query:    3 RKNFPMKIFLVLLGFYTANALATILGQTGDWDVLVAGIVVAAIEGIGMLIYK 158
            RKNFPMKIFL+LLGFYTANALATILGQTGDWDVLVAG+VVAAIEGIGML+YK
Sbjct:  113 RKNFPMKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEGIGMLMYK 164

[Close]

BLAST of EX570094 vs. TrEMBL
Match: C6TEB6_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.156e-19
Identity = 46/52 (88.46%), Postives = 51/52 (98.08%), Query Frame = 3

Query:    3 RKNFPMKIFLVLLGFYTANALATILGQTGDWDVLVAGIVVAAIEGIGMLIYK 158
            RKN P+K+FL+LLGFYTANALATILGQTGDWDVLVAG+VVAAIEGIGMLIY+
Sbjct:  119 RKNIPLKVFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEGIGMLIYR 170

[Close]

BLAST of EX570094 vs. TrEMBL
Match: C6SXW9_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.156e-19
Identity = 46/52 (88.46%), Postives = 51/52 (98.08%), Query Frame = 3

Query:    3 RKNFPMKIFLVLLGFYTANALATILGQTGDWDVLVAGIVVAAIEGIGMLIYK 158
            RKN P+K+FL+LLGFYTANALATILGQTGDWDVLVAG+VVAAIEGIGMLIY+
Sbjct:  120 RKNIPLKVFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEGIGMLIYR 171

[Close]

BLAST of EX570094 vs. TrEMBL
Match: C5X8A5_SORBI (Putative uncharacterized protein Sb02g019530 OS=Sorghum bicolor GN=Sb02g019530 PE=4 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 3.113e-18
Identity = 46/52 (88.46%), Postives = 49/52 (94.23%), Query Frame = 3

Query:    3 RKNFPMKIFLVLLGFYTANALATILGQTGDWDVLVAGIVVAAIEGIGMLIYK 158
            R N P KIFLVLLGFYTANALATILGQTGDWDVLVAG+VVAAIEGIGML+Y+
Sbjct:  113 RTNSPTKIFLVLLGFYTANALATILGQTGDWDVLVAGVVVAAIEGIGMLMYR 164

[Close]

BLAST of EX570094 vs. TrEMBL
Match: B4FBE1_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 3.113e-18
Identity = 46/52 (88.46%), Postives = 49/52 (94.23%), Query Frame = 3

Query:    3 RKNFPMKIFLVLLGFYTANALATILGQTGDWDVLVAGIVVAAIEGIGMLIYK 158
            R N P KIFLVLLGFYTANALATILGQTGDWDVLVAG+VVAAIEGIGML+Y+
Sbjct:  144 RTNSPTKIFLVLLGFYTANALATILGQTGDWDVLVAGVVVAAIEGIGMLMYR 195

[Close]

BLAST of EX570094 vs. SwissProt
Match: YC20L_ARATH (Ycf20-like protein OS=Arabidopsis thaliana GN=At1g65420 PE=2 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 5.634e-22
Identity = 50/52 (96.15%), Postives = 52/52 (100.00%), Query Frame = 3

Query:    3 RKNFPMKIFLVLLGFYTANALATILGQTGDWDVLVAGIVVAAIEGIGMLIYK 158
            RKNFPMKIFL+LLGFYTANALATILGQTGDWDVLVAGIVVAAIEGIGML+YK
Sbjct:  108 RKNFPMKIFLLLLGFYTANALATILGQTGDWDVLVAGIVVAAIEGIGMLMYK 159

[Close]

BLAST of EX570094 vs. SwissProt
Match: YCF20_MESVI (Uncharacterized protein ycf20 OS=Mesostigma viride GN=ycf20 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.373e-12
Identity = 33/49 (67.35%), Postives = 40/49 (81.63%), Query Frame = 3

Query:    9 NFPMKIFLVLLGFYTANALATILGQTGDWDVLVAGIVVAAIEGIGMLIY 155
            NFP+KI L+LLGF+ A  LAT+ GQTGDWDVLVAGI+VA IE +G  +Y
Sbjct:   27 NFPIKILLLLLGFFIATVLATVFGQTGDWDVLVAGILVAMIEILGNKMY 75

[Close]

BLAST of EX570094 vs. SwissProt
Match: YCF20_PORPU (Uncharacterized protein ycf20 OS=Porphyra purpurea GN=ycf20 PE=3 SV=1)

HSP 1 Score: 52.373 bits (124), Expect = 8.733e-7
Identity = 21/43 (48.84%), Postives = 32/43 (74.42%), Query Frame = 3

Query:   33 VLLGFYTANALATILGQTGDWDVLVAGIVVAAIEGIGMLIYKN 161
            +LLGF+ +  L+TI GQTGDW ++ A ++VAAIE +  ++Y N
Sbjct:   35 LLLGFFISTGLSTIPGQTGDWGIIAASLIVAAIELVSKIVYSN 77

[Close]

BLAST of EX570094 vs. TAIR peptide
Match: AT1G65420.1 (| Symbols: NPQ7 | Protein of unknown function (DUF565) | chr1:24297669-24298374 REVERSE LENGTH=197)

HSP 1 Score: 102.834 bits (255), Expect = 4.501e-23
Identity = 50/52 (96.15%), Postives = 52/52 (100.00%), Query Frame = 3

Query:    3 RKNFPMKIFLVLLGFYTANALATILGQTGDWDVLVAGIVVAAIEGIGMLIYK 158
            RKNFPMKIFL+LLGFYTANALATILGQTGDWDVLVAGIVVAAIEGIGML+YK
Sbjct:  108 RKNFPMKIFLLLLGFYTANALATILGQTGDWDVLVAGIVVAAIEGIGMLMYK 159

[Close]

BLAST of EX570094 vs. TAIR peptide
Match: AT3G56830.3 (| Symbols: | Protein of unknown function (DUF565) | chr3:21042781-21043840 REVERSE LENGTH=188)

HSP 1 Score: 67.3958 bits (163), Expect = 2.096e-12
Identity = 28/52 (53.85%), Postives = 40/52 (76.92%), Query Frame = 3

Query:    3 RKNFPMKIFLVLLGFYTANALATILGQTGDWDVLVAGIVVAAIEGIGMLIYK 158
            +K+ P K+F +L+GFY+A A +T +GQTGDWDVL AG+ V  +E IG L+Y+
Sbjct:  103 KKDLPKKLFFLLVGFYSATAFSTFIGQTGDWDVLSAGLAVLVVECIGALMYR 154

[Close]

BLAST of EX570094 vs. TAIR peptide
Match: AT3G56830.2 (| Symbols: | Protein of unknown function (DUF565) | chr3:21042781-21043840 REVERSE LENGTH=188)

HSP 1 Score: 67.3958 bits (163), Expect = 2.096e-12
Identity = 28/52 (53.85%), Postives = 40/52 (76.92%), Query Frame = 3

Query:    3 RKNFPMKIFLVLLGFYTANALATILGQTGDWDVLVAGIVVAAIEGIGMLIYK 158
            +K+ P K+F +L+GFY+A A +T +GQTGDWDVL AG+ V  +E IG L+Y+
Sbjct:  103 KKDLPKKLFFLLVGFYSATAFSTFIGQTGDWDVLSAGLAVLVVECIGALMYR 154

[Close]

BLAST of EX570094 vs. TAIR peptide
Match: AT3G56830.1 (| Symbols: | Protein of unknown function (DUF565) | chr3:21042755-21043840 REVERSE LENGTH=230)

HSP 1 Score: 67.3958 bits (163), Expect = 2.096e-12
Identity = 28/52 (53.85%), Postives = 40/52 (76.92%), Query Frame = 3

Query:    3 RKNFPMKIFLVLLGFYTANALATILGQTGDWDVLVAGIVVAAIEGIGMLIYK 158
            +K+ P K+F +L+GFY+A A +T +GQTGDWDVL AG+ V  +E IG L+Y+
Sbjct:  103 KKDLPKKLFFLLVGFYSATAFSTFIGQTGDWDVLSAGLAVLVVECIGALMYR 154

The following BLAST results are available for this feature:

BLAST of EX570094 vs. TrEMBL
BLAST of EX570094 vs. SwissProt
BLAST of EX570094 vs. TAIR peptide

BLAST of EX570094 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
Q84VL0_ARALY	1.143e-20	96.15	Putative antigen receptor (Fragment) OS=Arabidopsi...	[more]
Q84K02_ARATH	1.143e-20	96.15	Putative antigen receptor (Fragment) OS=Arabidopsi...	[more]
D7U6I2_VITVI	1.143e-20	92.31	Whole genome shotgun sequence of line PN40024, sca...	[more]
D7KRV4_ARALY	1.143e-20	96.15	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
B9HHY4_POPTR	1.143e-20	96.15	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9RM29_RICCO	1.493e-20	94.23	Putative uncharacterized protein OS=Ricinus commun...	[more]
C6TEB6_SOYBN	2.156e-19	88.46	Putative uncharacterized protein OS=Glycine max PE...	[more]
C6SXW9_SOYBN	2.156e-19	88.46	Putative uncharacterized protein OS=Glycine max PE...	[more]
C5X8A5_SORBI	3.113e-18	88.46	Putative uncharacterized protein Sb02g019530 OS=So...	[more]
B4FBE1_MAIZE	3.113e-18	88.46	Putative uncharacterized protein OS=Zea mays PE=2 ...	[more]

BLAST of EX570094 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 3


Match Name	E-value	Identity	Description
YC20L_ARATH	5.634e-22	96.15	Ycf20-like protein OS=Arabidopsis thaliana GN=At1g...	[more]
YCF20_MESVI	2.373e-12	67.35	Uncharacterized protein ycf20 OS=Mesostigma viride...	[more]
YCF20_PORPU	8.733e-7	48.84	Uncharacterized protein ycf20 OS=Porphyra purpurea...	[more]

BLAST of EX570094 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 4


Match Name	E-value	Identity	Description
AT1G65420.1	4.501e-23	96.15	\| Symbols: NPQ7 \| Protein of unknown function (DUF...	[more]
AT3G56830.3	2.096e-12	53.85	\| Symbols: \| Protein of unknown function (DUF565)...	[more]
AT3G56830.2	2.096e-12	53.85	\| Symbols: \| Protein of unknown function (DUF565)...	[more]
AT3G56830.1	2.096e-12	53.85	\| Symbols: \| Protein of unknown function (DUF565)...	[more]

InterPro

Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007572	Uncharacterised protein family Ycf20	PFAM	PF04483	DUF565	coord: 27..53 score: 5

Properties


Property Name	Value
Singlet in analysis	Pisum sativum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EX570094 ID=EX570094; Name=EX570094; organism=Pisum sativum; type=EST; length=163bp
CTAGAAAGAACTTCCCTATGAAAATATTCCTGGTGCTTTTGGGTTTCTAC
ACGGCAAATGCACTTGCTACAATCCTTGGTCAAACCGGGGATTGGGACGT
TCTGGTTGCTGGTATTGTAGTGGCAGCAATAGAGGGCATCGGTATGCTAA
TATATAAAAATCC

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **INTERPRO**
Term	Definition
IPR007572	Uncharacterised_Ycf20

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