EX570304

EST Overview
NameEX570304
Unique NameEX570304
TypeEST
OrganismPisum sativum (pea)
Sequence length432
Libraries
Library NameType
LIBEST_021973 Pisum sativum shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Pisum sativum unigene v12010-12-29
Homology
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BLAST of EX570304 vs. TrEMBL
Match: Q6KC90_PEA (FtsH-like protease OS=Pisum sativum GN=ftsh4 PE=2 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 2.558e-14
Identity = 32/53 (60.38%), Postives = 33/53 (62.26%), Query Frame = 1 
Query:   61 LQRVKSQKQQPQSRVVEAQGNSRPNPXXXXXXXXXXXXXXXXXXXQGVAPVGS 219
            L +VKSQKQQPQSRVVEAQGNSRPNP                   QGVAPVGS
Sbjct:  654 LAKVKSQKQQPQSRVVEAQGNSRPNPAAAAAAAAAAAAASAAAKAQGVAPVGS 706

HSP 2 Score: 42.3578 bits (98), Expect = 2.558e-14
Identity = 21/21 (100.00%), Postives = 21/21 (100.00%), Query Frame = 3 
Query:    6 ANALLEQETLTGSQINELLAK 68
            ANALLEQETLTGSQINELLAK
Sbjct:  636 ANALLEQETLTGSQINELLAK 656
The following BLAST results are available for this feature:
BLAST of EX570304 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 1
Match NameE-valueIdentityDescription
Q6KC90_PEA2.558e-1460.38FtsH-like protease OS=Pisum sativum GN=ftsh4 PE=2 ... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 30..48
score
NoneNo IPR availableSEGsegsegcoord: 16..41
score
NoneNo IPR availableSEGsegsegcoord: 2..15
score

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>EX570304 ID=EX570304; Name=EX570304; organism=Pisum sativum; type=EST; length=432bp
CACCAGCAAATGCTCTTCTGGAACAGGAGACACTTACAGGAAGTCAGATA
AATGAATTACTTGCAAAGGGTCAAATCCCAGAAGCAACAACCGCAGTCAC
GCGTAGTTGAGGCTCAGGGAAATTCACGGCCCAATCCAGCAGCTGCTGCG
GCTGCCGCGGCCGCTGCAGCTGCAGCTTCTGCTGCTGCAAAGGCTCAAGG
AGTTGCCCCAGTAGGATCTTAGCGCAGAAGACTGGCGATGCTAAATAATC
ACTACCGGATTAATATGTGCAGATAGTAATTTATTCGGTGTTTTTGTGGG
TTCCACTTCAGTCCATGGAACTCAACTTGTGTATTCAGGGCCACAGGCTG
ACCCCATATTTTAGTGAGTTGAAATATCTCGTAGGAGTTCCCATTAATGT
TTTTAATAATTGTCTTGTTTACTTTTATATAG
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