GH720921

EST Overview


Name	GH720921
Unique Name	GH720921
Type	EST
Organism	Pisum sativum (pea)
Sequence length	275

Libraries


Library Name	Type
LIBEST_024273 BACNI	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Pisum sativum unigene v1	Pisum sativum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Pisum sativum unigene v1	2010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Pisum sativum unigene v1	2010-12-29

Homology

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BLAST of GH720921 vs. TrEMBL
Match: B9SNI0_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1150230 PE=4 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 8.635e-8
Identity = 37/76 (48.68%), Postives = 41/76 (53.95%), Query Frame = -3

Query:   43 VLPAPSLQ---APPNSMQPLFVPAPVATPMQFATSV-XXXXXXXXXXXXXXXXXXXXXXXPGTGVFLPPPGSANSS 258
            VLPAPS++   APPN +QPLFV APVA PM F   V                        PGTGVFLPPPGS N+S
Sbjct:  542 VLPAPSIRPQIAPPNGVQPLFVTAPVAAPMPFPAPVPMPPVSTGWPAAPRHPPNRLPVPVPGTGVFLPPPGSGNAS 617

The following BLAST results are available for this feature:

BLAST of GH720921 vs. TrEMBL

BLAST of GH720921 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 1


Match Name	E-value	Identity	Description
B9SNI0_RICCO	8.635e-8	48.68	Putative uncharacterized protein OS=Ricinus commun...	[more]

InterPro

Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 6..39 score
None	No IPR available	SEG	seg	seg	coord: 30..42 score
None	No IPR available	SEG	seg	seg	coord: 39..62 score
None	No IPR available	SEG	seg	seg	coord: 33..53 score
None	No IPR available	SEG	seg	seg	coord: 24..40 score: NAcoord: 51..61 score

Properties


Property Name	Value
Singlet in analysis	Pisum sativum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GH720921 ID=GH720921; Name=GH720921; organism=Pisum sativum; type=EST; length=275bp
CGATTTCGAGCGGCCGCCCGGGCAGGTACCTTGTGAGTGCTGAGATGAAT
TGGCTGAGCCAGGTGGAGGAAGGAAGACTCCCGTGCCGGGAACAAGGACT
CGAGGAGGAGGATGCCTTGGAGGAGCTGTGGTCCATCCCGTANAGCCAGG
CGGGATCGGCACAGATGTAGCAAATTGCATGGGAGTAGCAACTGGTGCCG
GCACAAACAATGGCTGCATGCTGTTAGGAGGTGCTTGTAGGGAAGGAGCC
GGCAGTACCTCGGCCGCGACCACGC

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