AM161841

EST Overview


Name	AM161841
Unique Name	AM161841
Type	EST
Organism	Pisum sativum (pea)
Sequence length	244

Libraries


Library Name	Type
LIBEST_019360 Pisum sativum leaf vegetative	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Pisum sativum unigene v1	Pisum sativum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Pisum sativum unigene v1	2010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Pisum sativum unigene v1	2010-12-29

Homology

[Close]

BLAST of AM161841 vs. TrEMBL
Match: B7FK45_MEDTR (Putative uncharacterized protein (Fragment) OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 6.605e-13
Identity = 46/80 (57.50%), Postives = 47/80 (58.75%), Query Frame = -3

Query:    3 LVTREQYVEKRVNFQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGNSRLSFSEDIIDNDAQEEEEAHQSNNIETNGG 242
            LVTRE+YVEKRVN QS                              KGNSRLSFSEDI DNDAQEEEE HQSNNIETNGG
Sbjct:   70 LVTREEYVEKRVNIQSKIEEEEKEKLQKQIQEEEELQLQKRKKRKIKGNSRLSFSEDI-DNDAQEEEEPHQSNNIETNGG 148

[Close]

BLAST of AM161841 vs. TrEMBL
Match: C6TKZ7_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 56.9954 bits (136), Expect = 7.073e-7
Identity = 34/78 (43.59%), Postives = 40/78 (51.28%), Query Frame = -3

Query:    9 LVTREQYVEKRVNFQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGNSRLSFSEDIIDNDAQEEEEAHQSNNIETN 242
            LVTREQYVEKRVN QS                              +GNSRLSF+ED IDN+ QE+E  H  +N+E N
Sbjct:   70 LVTREQYVEKRVNIQSKIEEEEKEKLQKQQQEEEELQLQKRKKRKIRGNSRLSFAED-IDNEPQEDEPHHSKDNLEAN 146

[Close]

BLAST of AM161841 vs. TrEMBL
Match: C6T8B2_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 56.9954 bits (136), Expect = 7.073e-7
Identity = 33/78 (42.31%), Postives = 40/78 (51.28%), Query Frame = -3

Query:    9 LVTREQYVEKRVNFQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGNSRLSFSEDIIDNDAQEEEEAHQSNNIETN 242
            LVTREQYVEKRVN QS                              +GNSRLSF+ED +DND Q++E  H  +N+E N
Sbjct:   70 LVTREQYVEKRVNIQSKIEEEEKEKLQKQQQEEEELQLEKRKKRKIRGNSRLSFAED-VDNDPQDDEPHHSKDNLEAN 146

The following BLAST results are available for this feature:

BLAST of AM161841 vs. TrEMBL

BLAST of AM161841 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 3


Match Name	E-value	Identity	Description
B7FK45_MEDTR	6.605e-13	57.50	Putative uncharacterized protein (Fragment) OS=Med...	[more]
C6TKZ7_SOYBN	7.073e-7	43.59	Putative uncharacterized protein OS=Glycine max PE...	[more]
C6T8B2_SOYBN	7.073e-7	42.31	Putative uncharacterized protein OS=Glycine max PE...	[more]

InterPro

Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 1..19 score
None	No IPR available	SEG	seg	seg	coord: 17..47 score

Properties


Property Name	Value
Singlet in analysis	Pisum sativum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>AM161841 ID=AM161841; Name=AM161841; organism=Pisum sativum; type=EST; length=244bp
ACTCCTCCATTTGTTTCTATATTATTACTTTGATGTGCCTCCTCCTCTTC
CTGAGCATCATTGTCAATAATATCTTCGGAAAATGATAGTCTCGAATTTC
CCTTGATCTTCCTCTTTTTGCGTTTTTGTAATTGAAGCTCCTCCTCCTCT
TGGAGTTGCTTCTGAAGCTTCTCCTTCTCTTCCTCCTCTATTTTACTTTG
AAAATTAACCCTCTTCTCCACATACTGTTCACGGGTGACAAGAC

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