EX569534
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EX569534 vs. TrEMBL
Match: B9RM13_RICCO (Chromatin assembly factor 1, subunit A, putative OS=Ricinus communis GN=RCOM_1076830 PE=4 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 2.022e-9 Identity = 32/62 (51.61%), Postives = 40/62 (64.52%), Query Frame = 1 Query: 1 VKKEVLVKLGLSVKPEKSSGGPRSIAAFFSKRCLPPGGESAKPGETSPLTPLKSCSAIPDSQ 186 VKKE+L K+G+S+ PEK G ++I+ FFSKRCLPP ES P TSP K SA+ Q Sbjct: 759 VKKEILDKVGISISPEKGGGRMQNISKFFSKRCLPPAAESINPEATSPEPSRKPGSAVQGQQ 820
BLAST of EX569534 vs. TrEMBL
Match: D7ST05_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_499.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00007185001 PE=4 SV=1) HSP 1 Score: 61.6178 bits (148), Expect = 2.920e-8 Identity = 33/62 (53.23%), Postives = 39/62 (62.90%), Query Frame = 1 Query: 1 VKKEVLVKLGLSVKPEKSSGGPRSIAAFFSKRCLPPGGESAKPGETSPLTPLKSCSAIPDSQ 186 VKK+VL KLGLS+ PEK G +SIAAFFSKRCLPP + P +TSP K + Q Sbjct: 188 VKKDVLHKLGLSISPEKG-GRTKSIAAFFSKRCLPPSNRISGPSKTSPQQTQKPAPPVQAQQ 248
BLAST of EX569534 vs. TrEMBL
Match: B9HHZ2_POPTR (Putative uncharacterized protein OS=Populus trichocarpa GN=POPTRDRAFT_656344 PE=4 SV=1) HSP 1 Score: 61.6178 bits (148), Expect = 2.920e-8 Identity = 31/62 (50.00%), Postives = 40/62 (64.52%), Query Frame = 1 Query: 1 VKKEVLVKLGLSVKPEKSSGGPRSIAAFFSKRCLPPGGESAKPGETSPLTPLKSCSAIPDSQ 186 VKKEVL G+ PEKS G +I+ FFSKRCLPP G+S P E+SP P+ ++ +SQ Sbjct: 186 VKKEVLDGFGIISSPEKSRGRKHNISTFFSKRCLPPAGKSTNPNESSP--PMLKHGSVAESQ 245
BLAST of EX569534 vs. TrEMBL
Match: A5C513_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_008038 PE=4 SV=1) HSP 1 Score: 61.6178 bits (148), Expect = 2.920e-8 Identity = 33/62 (53.23%), Postives = 39/62 (62.90%), Query Frame = 1 Query: 1 VKKEVLVKLGLSVKPEKSSGGPRSIAAFFSKRCLPPGGESAKPGETSPLTPLKSCSAIPDSQ 186 VKK+VL KLGLS+ PEK G +SIAAFFSKRCLPP + P +TSP K + Q Sbjct: 805 VKKDVLHKLGLSISPEKG-GRTKSIAAFFSKRCLPPSNRISGPSKTSPQQTQKPAPPVQAQQ 865
BLAST of EX569534 vs. TAIR peptide
Match: AT1G65470.2 (| Symbols: FAS1 | chromatin assembly factor-1 (FASCIATA1) (FAS1) | chr1:24319906-24323879 REVERSE LENGTH=807) HSP 1 Score: 49.6766 bits (117), Expect = 7.394e-7 Identity = 29/46 (63.04%), Postives = 33/46 (71.74%), Query Frame = 1 Query: 1 VKKEVLVKLGLSVKPEKSSGG---PRSIAAFFSKRCLPPGGESAKP 129 VKKEVL KLGLS P+K GG P++I+ FFSKRCLPP S KP Sbjct: 751 VKKEVLTKLGLSPSPDK--GGKRLPKTISTFFSKRCLPP---STKP 791
BLAST of EX569534 vs. TAIR peptide
Match: AT1G65470.1 (| Symbols: FAS1, NFB2 | chromatin assembly factor-1 (FASCIATA1) (FAS1) | chr1:24319906-24323879 REVERSE LENGTH=815) HSP 1 Score: 49.6766 bits (117), Expect = 7.394e-7 Identity = 29/46 (63.04%), Postives = 33/46 (71.74%), Query Frame = 1 Query: 1 VKKEVLVKLGLSVKPEKSSGG---PRSIAAFFSKRCLPPGGESAKP 129 VKKEVL KLGLS P+K GG P++I+ FFSKRCLPP S KP Sbjct: 759 VKKEVLTKLGLSPSPDK--GGKRLPKTISTFFSKRCLPP---STKP 799 The following BLAST results are available for this feature:
BLAST of EX569534 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl) Total hits: 4
BLAST of EX569534 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EX569534 ID=EX569534; Name=EX569534; organism=Pisum sativum; type=EST; length=431bpback to top |