EX569534

EST Overview
NameEX569534
Unique NameEX569534
TypeEST
OrganismPisum sativum (pea)
Sequence length431
Libraries
Library NameType
LIBEST_021973 Pisum sativum shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
Homology
BLAST of EX569534 vs. TrEMBL
Match: B9RM13_RICCO (Chromatin assembly factor 1, subunit A, putative OS=Ricinus communis GN=RCOM_1076830 PE=4 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 2.022e-9
Identity = 32/62 (51.61%), Postives = 40/62 (64.52%), Query Frame = 1
Query:    1 VKKEVLVKLGLSVKPEKSSGGPRSIAAFFSKRCLPPGGESAKPGETSPLTPLKSCSAIPDSQ 186
            VKKE+L K+G+S+ PEK  G  ++I+ FFSKRCLPP  ES  P  TSP    K  SA+   Q
Sbjct:  759 VKKEILDKVGISISPEKGGGRMQNISKFFSKRCLPPAAESINPEATSPEPSRKPGSAVQGQQ 820          
BLAST of EX569534 vs. TrEMBL
Match: D7ST05_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_499.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00007185001 PE=4 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 2.920e-8
Identity = 33/62 (53.23%), Postives = 39/62 (62.90%), Query Frame = 1
Query:    1 VKKEVLVKLGLSVKPEKSSGGPRSIAAFFSKRCLPPGGESAKPGETSPLTPLKSCSAIPDSQ 186
            VKK+VL KLGLS+ PEK  G  +SIAAFFSKRCLPP    + P +TSP    K    +   Q
Sbjct:  188 VKKDVLHKLGLSISPEKG-GRTKSIAAFFSKRCLPPSNRISGPSKTSPQQTQKPAPPVQAQQ 248          
BLAST of EX569534 vs. TrEMBL
Match: B9HHZ2_POPTR (Putative uncharacterized protein OS=Populus trichocarpa GN=POPTRDRAFT_656344 PE=4 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 2.920e-8
Identity = 31/62 (50.00%), Postives = 40/62 (64.52%), Query Frame = 1
Query:    1 VKKEVLVKLGLSVKPEKSSGGPRSIAAFFSKRCLPPGGESAKPGETSPLTPLKSCSAIPDSQ 186
            VKKEVL   G+   PEKS G   +I+ FFSKRCLPP G+S  P E+SP  P+    ++ +SQ
Sbjct:  186 VKKEVLDGFGIISSPEKSRGRKHNISTFFSKRCLPPAGKSTNPNESSP--PMLKHGSVAESQ 245          
BLAST of EX569534 vs. TrEMBL
Match: A5C513_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_008038 PE=4 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 2.920e-8
Identity = 33/62 (53.23%), Postives = 39/62 (62.90%), Query Frame = 1
Query:    1 VKKEVLVKLGLSVKPEKSSGGPRSIAAFFSKRCLPPGGESAKPGETSPLTPLKSCSAIPDSQ 186
            VKK+VL KLGLS+ PEK  G  +SIAAFFSKRCLPP    + P +TSP    K    +   Q
Sbjct:  805 VKKDVLHKLGLSISPEKG-GRTKSIAAFFSKRCLPPSNRISGPSKTSPQQTQKPAPPVQAQQ 865          
BLAST of EX569534 vs. TAIR peptide
Match: AT1G65470.2 (| Symbols: FAS1 | chromatin assembly factor-1 (FASCIATA1) (FAS1) | chr1:24319906-24323879 REVERSE LENGTH=807)

HSP 1 Score: 49.6766 bits (117), Expect = 7.394e-7
Identity = 29/46 (63.04%), Postives = 33/46 (71.74%), Query Frame = 1
Query:    1 VKKEVLVKLGLSVKPEKSSGG---PRSIAAFFSKRCLPPGGESAKP 129
            VKKEVL KLGLS  P+K  GG   P++I+ FFSKRCLPP   S KP
Sbjct:  751 VKKEVLTKLGLSPSPDK--GGKRLPKTISTFFSKRCLPP---STKP 791          
BLAST of EX569534 vs. TAIR peptide
Match: AT1G65470.1 (| Symbols: FAS1, NFB2 | chromatin assembly factor-1 (FASCIATA1) (FAS1) | chr1:24319906-24323879 REVERSE LENGTH=815)

HSP 1 Score: 49.6766 bits (117), Expect = 7.394e-7
Identity = 29/46 (63.04%), Postives = 33/46 (71.74%), Query Frame = 1
Query:    1 VKKEVLVKLGLSVKPEKSSGG---PRSIAAFFSKRCLPPGGESAKP 129
            VKKEVL KLGLS  P+K  GG   P++I+ FFSKRCLPP   S KP
Sbjct:  759 VKKEVLTKLGLSPSPDK--GGKRLPKTISTFFSKRCLPP---STKP 799          
The following BLAST results are available for this feature:
BLAST of EX569534 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 4
Match NameE-valueIdentityDescription
B9RM13_RICCO2.022e-951.61Chromatin assembly factor 1, subunit A, putative O... [more]
D7ST05_VITVI2.920e-853.23Whole genome shotgun sequence of line PN40024, sca... [more]
B9HHZ2_POPTR2.920e-850.00Putative uncharacterized protein OS=Populus tricho... [more]
A5C513_VITVI2.920e-853.23Putative uncharacterized protein OS=Vitis vinifera... [more]
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BLAST of EX569534 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT1G65470.27.394e-763.04| Symbols: FAS1 | chromatin assembly factor-1 (FAS... [more]
AT1G65470.17.394e-763.04| Symbols: FAS1, NFB2 | chromatin assembly factor-... [more]
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Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>EX569534 ID=EX569534; Name=EX569534; organism=Pisum sativum; type=EST; length=431bp
GTGAAGAAAGAAGTATTGGTTAAGCTTGGCTTGTCAGTTAAACCTGAAAA
GAGCAGTGGTGGACCAAGAAGTATTGCTGCATTTTTCTCTAAAAGGTGTT
TGCCACCTGGAGGTGAAAGTGCGAAACCTGGTGAAACTTCGCCACTCACA
CCCTTGAAATCATGTTCTGCCATTCCAGATTCACAAACCAGCAGATCACA
TAATGTCTAGTATCTGATATTTACTTGAAGAATGGCATTTTCGCTACATA
TAGACTTTTTTGTAAAAATTAGAGACAGTGGTTGTGCTTGATGCTCTTTT
ACCACTCTAAGAAAGTTTCTGAATATCATTTGCCAACAACGTCTCATTTT
TCTGTAATGTTTGACTATATTGTAAAGAGCAATGCTGTTGTTTGCCTACA
CTTTCTGAGTTTATTTTGCTATTTTTGACTA
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