AM161736

EST Overview
NameAM161736
Unique NameAM161736
TypeEST
OrganismPisum sativum (pea)
Sequence length363
Libraries
Library NameType
LIBEST_019360 Pisum sativum leaf vegetativecdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Pisum sativum unigene v12010-12-29
Homology
BLAST of AM161736 vs. TrEMBL
Match: B9RVA6_RICCO (Eukaryotic translation initiation factor 3 subunit, putative OS=Ricinus communis GN=RCOM_0901430 PE=4 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 2.634e-17
Identity = 60/151 (39.74%), Postives = 74/151 (49.01%), Query Frame = -1
Query:    1 SPLYYRTNYMFRMKHGSAKIREISGSGGPRIMNPHAPEFVPRRASQTETG------------------------------EVXXXXXXXXXXXXXXXEIARQILLSFLVKSVHQNADTVDEPKANEGKVEKFENSSDEVAKDSAVIKIMYG 363
            SPLYYRT   +R+K G  +      +  PR MNPHAPEFVPR+A Q   G                              EV               E+ARQILLSF+V SV  N DT  EP  +E K++  E+SSD +A DSA+IKI+YG
Sbjct: 1242 SPLYYRTTRPYRLKQGLLRY-PTPMTMPPRSMNPHAPEFVPRKAWQRNPGTRDSQVPNESNTLIEKSKVEEEKLDMESGNEVKDLSSRKTSSESEKAELARQILLSFIVNSVQHNGDTGSEPVRSEKKLDSSESSSDAIANDSAIIKILYG 1391          
BLAST of AM161736 vs. TrEMBL
Match: A5BZB0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_010381 PE=4 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 3.804e-16
Identity = 63/157 (40.13%), Postives = 75/157 (47.77%), Query Frame = -1
Query:    1 SPLYYRTNYMFRMKHGSAKIREI----SGSGGPRIMNPHAPEFVPRRASQTETGEV--------------------------------XXXXXXXXXXXXXXXEIARQILLSFLVKSVHQNADTVDEPKANEGKVEKFENSSDEVAKDSAVIKIMYG 363
            SPLYYRTN  FR+K+G  K +      SG G  RIMNPHAPEFVPRRA QT+T                                                  E+A QILLSF+VKSV  N D   E   NE K E   +SS+ +A D+A+IKI+YG
Sbjct: 1440 SPLYYRTNNSFRIKNGYLKYQNPVIGRSGFGPSRIMNPHAPEFVPRRAWQTKTPNADSQAPPELDSFVETNKELPTEEENLDKKATNKAKDGRKKSTSDSEKSELAXQILLSFIVKSVQHNLDPPSEAAVNE-KHEYTGSSSEAIANDTAIIKILYG 1595          
The following BLAST results are available for this feature:
BLAST of AM161736 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 2
Match NameE-valueIdentityDescription
B9RVA6_RICCO2.634e-1739.74Eukaryotic translation initiation factor 3 subunit... [more]
A5BZB0_VITVI3.804e-1640.13Putative uncharacterized protein OS=Vitis vinifera... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 53..68
score

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>AM161736 ID=AM161736; Name=AM161736; organism=Pisum sativum; type=EST; length=363bp
ACCATACATTATTTTAATGACAGCACTGTCTTTAGCTACTTCGTCAGAAG
AATTTTCAAACTTCTCAACTTTTCCTTCATTAGCTTTAGGCTCATCCACA
GTATCAGCATTTTGATGAACCGATTTCACTAGAAAACTCAGCAATATCTG
TCTTGCTATCTCTGACTTCTCAGATTCGGAAAGACTGTTTTTTGAAGAAT
TGTTCTTGACTTCACCTGTTTCTGTTTGAGAAGCACGTCTTGGAACAAAC
TCAGGAGCATGTGGATTCATTATTCTTGGACCACCTGATCCACTTATTTC
CCTTATTTTCGCTGAACCGTGCTTCATCCGAAACATATAATTGGTTCTGT
AATACAATGGTGA
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