AM161765

EST Overview
NameAM161765
Unique NameAM161765
TypeEST
OrganismPisum sativum (pea)
Sequence length362
Libraries
Library NameType
LIBEST_019360 Pisum sativum leaf vegetativecdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
InterProScan analysis for Pisum sativum unigene v12010-12-29
Homology
BLAST of AM161765 vs. TrEMBL
Match: C6TAG6_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 1.958e-20
Identity = 58/120 (48.33%), Postives = 62/120 (51.67%), Query Frame = 2
Query:    2 EAAEKAVALLNNEQDWRNGMRVKFLNRMDKYAHKKQAWKGXXXXXXXXXXXXXXTRDEENHVSHAHKNQAWKGXXXXXXXXXXXXXXARDEENHVSHEHHEDILEEKDGEHLSKDKGGQR 361
            EAAEKAVA+LNNEQDWRNGMRVK L  M  Y HKKQAWKG              T DEENH                                  S+EH ED  EE+DG+HLSKDKGGQR
Sbjct:  259 EAAEKAVAMLNNEQDWRNGMRVKLLKGMGTYGHKKQAWKGSHSEKNSSRHVSEQTGDEENH---------------------------------GSNEHREDAHEEEDGDHLSKDKGGQR 345          
BLAST of AM161765 vs. TrEMBL
Match: B9I0Z4_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_234558 PE=4 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 6.517e-16
Identity = 50/120 (41.67%), Postives = 63/120 (52.50%), Query Frame = 2
Query:    2 EAAEKAVALLNNEQDWRNGMRVKFLNRMDKYAHKKQAWKGXXXXXXXXXXXXXXTRDEENHVSHAHKNQAWKGXXXXXXXXXXXXXXARDEENHVSHEHHEDILEEKDGEHLSKDKGGQR 361
            EAAEKAVA LNNEQDWRNGMRVK LN+M K+  ++Q W+                         + KN+  +G              A D E H S EHH+D   E+DGEH+SK+K GQ+
Sbjct:  153 EAAEKAVAALNNEQDWRNGMRVKHLNQMAKHGQRRQVWR----------------------EPDSEKNRKGRG-----------TNLAGDVEKHDSSEHHDDTPVEEDGEHISKEKNGQQ 239          
BLAST of AM161765 vs. TrEMBL
Match: D7TK39_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_3.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00021437001 PE=4 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.040e-13
Identity = 49/121 (40.50%), Postives = 65/121 (53.72%), Query Frame = 2
Query:    2 EAAEKAVALLNNEQDWRNGMRVKFLNR-MDKYAHKKQAWKGXXXXXXXXXXXXXXTRDEENHVSHAHKNQAWKGXXXXXXXXXXXXXXARDEENHVSHEHHEDILEEKDGEHLSKDKGGQR 361
            EAAE+AVA LNNEQDWRNGMRVK L++ M KY  +++ WKG                ++ + V  AH                     A DEEN+ S E H++  +E+DGEHL+K+K G R
Sbjct:  196 EAAERAVATLNNEQDWRNGMRVKLLHKQMGKYGQRRKGWKGSDM-------------EKNSSVGPAHP--------------------AGDEENN-SSERHDETPDEEDGEHLTKEKNGPR 282          
BLAST of AM161765 vs. TrEMBL
Match: D7MRZ1_ARALY (Predicted protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_683381 PE=4 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 9.432e-7
Identity = 38/124 (30.65%), Postives = 51/124 (41.13%), Query Frame = 2
Query:    2 EAAEKAVALLNNEQDWRNGMRVKFLNRMDKYAHKKQAWKGXXXXXXXXXXXXXXTRDEENHVSHAHKNQAWKGXXXXXXXXXXXXXXARDEENHVSHEHH----EDILEEKDGEHLSKDKGGQR 361
            EAAEKA A LNNEQDWRNG+RVK L +  K+A ++ A +               T  E+N  +  H+                          H  H H     +D+    DG +  KDK G +
Sbjct:  258 EAAEKAAATLNNEQDWRNGLRVKLLEQTGKFAQRRPARREVDKEKDNTGRVHDQTEGEKNKKTREHQ--------------------------HHRHPHSDNTADDVSSILDGGNHQKDKNGNK 355          
BLAST of AM161765 vs. TAIR peptide
Match: AT5G46250.1 (| Symbols: | RNA-binding protein | chr5:18755388-18758056 FORWARD LENGTH=422)

HSP 1 Score: 55.4546 bits (132), Expect = 8.469e-9
Identity = 38/121 (31.40%), Postives = 50/121 (41.32%), Query Frame = 2
Query:    2 EAAEKAVALLNNEQDWRNGMRVKFLNR-MDKYAHKKQAWKGXXXXXXXXXXXXXXTRDEENHVSHAHKNQAWKGXXXXXXXXXXXXXXARDEENHVSHEHHEDILEEKDGEHLSKDKGGQR 361
            EAAEKA A LNNEQDWRNG+RVK L +   K+A ++ A +               T  E+N  +  H+N                              HH D   + DG +  KDK G +
Sbjct:  257 EAAEKAAATLNNEQDWRNGLRVKLLEQAAGKFAQRRPARREVDKEKDTTGRVHDQTGGEKNKKTREHQNH---------------------------RLHHSDNPADDDGGNHQKDKNGNK 350          
BLAST of AM161765 vs. TAIR peptide
Match: AT5G46250.3 (| Symbols: | RNA-binding protein | chr5:18755388-18757723 FORWARD LENGTH=340)

HSP 1 Score: 52.7582 bits (125), Expect = 5.490e-8
Identity = 29/69 (42.03%), Postives = 38/69 (55.07%), Query Frame = 2
Query:    2 EAAEKAVALLNNEQDWRNGMRVKFLNR-MDKYAHKKQAWKGXXXXXXXXXXXXXXTRDEENHVSHAHKN 205
            EAAEKAV  LNNEQDWRNG+RVK L +   K+A ++ A +               T  E+N  +  H+N
Sbjct:  257 EAAEKAVTTLNNEQDWRNGLRVKLLEQAAGKFAQRRPARREVDKEKDTTGRVHDQTGGEKNKKTREHQN 325          
BLAST of AM161765 vs. TAIR peptide
Match: AT5G46250.2 (| Symbols: | RNA-binding protein | chr5:18755388-18757723 FORWARD LENGTH=340)

HSP 1 Score: 52.7582 bits (125), Expect = 5.490e-8
Identity = 29/69 (42.03%), Postives = 38/69 (55.07%), Query Frame = 2
Query:    2 EAAEKAVALLNNEQDWRNGMRVKFLNR-MDKYAHKKQAWKGXXXXXXXXXXXXXXTRDEENHVSHAHKN 205
            EAAEKA A LNNEQDWRNG+RVK L +   K+A ++ A +               T  E+N  +  H+N
Sbjct:  257 EAAEKAAATLNNEQDWRNGLRVKLLEQAAGKFAQRRPARREVDKEKDTTGRVHDQTGGEKNKKTREHQN 325          
The following BLAST results are available for this feature:
BLAST of AM161765 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 4
Match NameE-valueIdentityDescription
C6TAG6_SOYBN1.958e-2048.33Putative uncharacterized protein OS=Glycine max PE... [more]
B9I0Z4_POPTR6.517e-1641.67Predicted protein (Fragment) OS=Populus trichocarp... [more]
D7TK39_VITVI1.040e-1340.50Whole genome shotgun sequence of line PN40024, sca... [more]
D7MRZ1_ARALY9.432e-730.65Predicted protein OS=Arabidopsis lyrata subsp. lyr... [more]
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BLAST of AM161765 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 3
Match NameE-valueIdentityDescription
AT5G46250.18.469e-931.40| Symbols: | RNA-binding protein | chr5:18755388-... [more]
AT5G46250.35.490e-842.03| Symbols: | RNA-binding protein | chr5:18755388-... [more]
AT5G46250.25.490e-842.03| Symbols: | RNA-binding protein | chr5:18755388-... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 41..54
score: NAcoord: 74..87
score

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>AM161765 ID=AM161765; Name=AM161765; organism=Pisum sativum; type=EST; length=362bp
CGAGGCTGCTGAGAAAGCTGTGGCACTGTTAAATAATGAACAAGACTGGA
GAAATGGGATGCGAGTTAAATTTCTCAATCGGATGGATAAGTATGCCCAC
AAAAAACAAGCTTGGAAGGGATCTAACTCTGAGAAGAATAGCTCAAGTCA
TGCATCTGAGAAAACTAGAGATGAGGAGAATCATGTCTCACATGCCCACA
AAAACCAAGCTTGGAAGGGATCTAACTCAGAGAAGAATAGCTCAAGTCAT
GTATCTGAGAAAGCTAGAGACGAGGAGAATCACGTCTCACATGAGCATCA
TGAAGATATTCTTGAGGAAAAGGATGGGGAGCATTTGTCAAAGGATAAAG
GTGGGCAGAGGT
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