AM161765
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of AM161765 vs. TrEMBL
Match: C6TAG6_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 1.958e-20 Identity = 58/120 (48.33%), Postives = 62/120 (51.67%), Query Frame = 2 Query: 2 EAAEKAVALLNNEQDWRNGMRVKFLNRMDKYAHKKQAWKGXXXXXXXXXXXXXXTRDEENHVSHAHKNQAWKGXXXXXXXXXXXXXXARDEENHVSHEHHEDILEEKDGEHLSKDKGGQR 361 EAAEKAVA+LNNEQDWRNGMRVK L M Y HKKQAWKG T DEENH S+EH ED EE+DG+HLSKDKGGQR Sbjct: 259 EAAEKAVAMLNNEQDWRNGMRVKLLKGMGTYGHKKQAWKGSHSEKNSSRHVSEQTGDEENH---------------------------------GSNEHREDAHEEEDGDHLSKDKGGQR 345
BLAST of AM161765 vs. TrEMBL
Match: B9I0Z4_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_234558 PE=4 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 6.517e-16 Identity = 50/120 (41.67%), Postives = 63/120 (52.50%), Query Frame = 2 Query: 2 EAAEKAVALLNNEQDWRNGMRVKFLNRMDKYAHKKQAWKGXXXXXXXXXXXXXXTRDEENHVSHAHKNQAWKGXXXXXXXXXXXXXXARDEENHVSHEHHEDILEEKDGEHLSKDKGGQR 361 EAAEKAVA LNNEQDWRNGMRVK LN+M K+ ++Q W+ + KN+ +G A D E H S EHH+D E+DGEH+SK+K GQ+ Sbjct: 153 EAAEKAVAALNNEQDWRNGMRVKHLNQMAKHGQRRQVWR----------------------EPDSEKNRKGRG-----------TNLAGDVEKHDSSEHHDDTPVEEDGEHISKEKNGQQ 239
BLAST of AM161765 vs. TrEMBL
Match: D7TK39_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_3.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00021437001 PE=4 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.040e-13 Identity = 49/121 (40.50%), Postives = 65/121 (53.72%), Query Frame = 2 Query: 2 EAAEKAVALLNNEQDWRNGMRVKFLNR-MDKYAHKKQAWKGXXXXXXXXXXXXXXTRDEENHVSHAHKNQAWKGXXXXXXXXXXXXXXARDEENHVSHEHHEDILEEKDGEHLSKDKGGQR 361 EAAE+AVA LNNEQDWRNGMRVK L++ M KY +++ WKG ++ + V AH A DEEN+ S E H++ +E+DGEHL+K+K G R Sbjct: 196 EAAERAVATLNNEQDWRNGMRVKLLHKQMGKYGQRRKGWKGSDM-------------EKNSSVGPAHP--------------------AGDEENN-SSERHDETPDEEDGEHLTKEKNGPR 282
BLAST of AM161765 vs. TrEMBL
Match: D7MRZ1_ARALY (Predicted protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_683381 PE=4 SV=1) HSP 1 Score: 56.6102 bits (135), Expect = 9.432e-7 Identity = 38/124 (30.65%), Postives = 51/124 (41.13%), Query Frame = 2 Query: 2 EAAEKAVALLNNEQDWRNGMRVKFLNRMDKYAHKKQAWKGXXXXXXXXXXXXXXTRDEENHVSHAHKNQAWKGXXXXXXXXXXXXXXARDEENHVSHEHH----EDILEEKDGEHLSKDKGGQR 361 EAAEKA A LNNEQDWRNG+RVK L + K+A ++ A + T E+N + H+ H H H +D+ DG + KDK G + Sbjct: 258 EAAEKAAATLNNEQDWRNGLRVKLLEQTGKFAQRRPARREVDKEKDNTGRVHDQTEGEKNKKTREHQ--------------------------HHRHPHSDNTADDVSSILDGGNHQKDKNGNK 355
BLAST of AM161765 vs. TAIR peptide
Match: AT5G46250.1 (| Symbols: | RNA-binding protein | chr5:18755388-18758056 FORWARD LENGTH=422) HSP 1 Score: 55.4546 bits (132), Expect = 8.469e-9 Identity = 38/121 (31.40%), Postives = 50/121 (41.32%), Query Frame = 2 Query: 2 EAAEKAVALLNNEQDWRNGMRVKFLNR-MDKYAHKKQAWKGXXXXXXXXXXXXXXTRDEENHVSHAHKNQAWKGXXXXXXXXXXXXXXARDEENHVSHEHHEDILEEKDGEHLSKDKGGQR 361 EAAEKA A LNNEQDWRNG+RVK L + K+A ++ A + T E+N + H+N HH D + DG + KDK G + Sbjct: 257 EAAEKAAATLNNEQDWRNGLRVKLLEQAAGKFAQRRPARREVDKEKDTTGRVHDQTGGEKNKKTREHQNH---------------------------RLHHSDNPADDDGGNHQKDKNGNK 350
BLAST of AM161765 vs. TAIR peptide
Match: AT5G46250.3 (| Symbols: | RNA-binding protein | chr5:18755388-18757723 FORWARD LENGTH=340) HSP 1 Score: 52.7582 bits (125), Expect = 5.490e-8 Identity = 29/69 (42.03%), Postives = 38/69 (55.07%), Query Frame = 2 Query: 2 EAAEKAVALLNNEQDWRNGMRVKFLNR-MDKYAHKKQAWKGXXXXXXXXXXXXXXTRDEENHVSHAHKN 205 EAAEKAV LNNEQDWRNG+RVK L + K+A ++ A + T E+N + H+N Sbjct: 257 EAAEKAVTTLNNEQDWRNGLRVKLLEQAAGKFAQRRPARREVDKEKDTTGRVHDQTGGEKNKKTREHQN 325
BLAST of AM161765 vs. TAIR peptide
Match: AT5G46250.2 (| Symbols: | RNA-binding protein | chr5:18755388-18757723 FORWARD LENGTH=340) HSP 1 Score: 52.7582 bits (125), Expect = 5.490e-8 Identity = 29/69 (42.03%), Postives = 38/69 (55.07%), Query Frame = 2 Query: 2 EAAEKAVALLNNEQDWRNGMRVKFLNR-MDKYAHKKQAWKGXXXXXXXXXXXXXXTRDEENHVSHAHKN 205 EAAEKA A LNNEQDWRNG+RVK L + K+A ++ A + T E+N + H+N Sbjct: 257 EAAEKAAATLNNEQDWRNGLRVKLLEQAAGKFAQRRPARREVDKEKDTTGRVHDQTGGEKNKKTREHQN 325 The following BLAST results are available for this feature:
BLAST of AM161765 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl) Total hits: 4
BLAST of AM161765 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide) Total hits: 3
InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >AM161765 ID=AM161765; Name=AM161765; organism=Pisum sativum; type=EST; length=362bpback to top |