AM162161

EST Overview
NameAM162161
Unique NameAM162161
TypeEST
OrganismPisum sativum (pea)
Sequence length344
Libraries
Library NameType
LIBEST_019360 Pisum sativum leaf vegetativecdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
Homology
BLAST of AM162161 vs. TrEMBL
Match: C6TK97_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 5.443e-31
Identity = 79/119 (66.39%), Postives = 87/119 (73.11%), Query Frame = 2
Query:   23 MASLC--HNAFSFSPTKLF----PIMLKPSF---RCSSIT---TNSTPSYNSIVFETVRLLGPPTKFEASKLKVVLLEDQINRYASIIPRTYILSHCDLTANLTLAVSNVIKLEQLRGW 343
            MA  C  +NAFSFSPT+ F     IM KPS    RC       TN+TPSYN++V E VRLL P  +FE SKLKVVLLEDQIN++AS  PRTYILSHCD TANLTLAVSNVI LEQLRGW
Sbjct:    1 MACHCASYNAFSFSPTREFFATNHIMSKPSSTTTRCRPFLLSITNATPSYNTLVSEAVRLLVPSARFEPSKLKVVLLEDQINKHASFTPRTYILSHCDFTANLTLAVSNVINLEQLRGW 119          
BLAST of AM162161 vs. TrEMBL
Match: B9GTY1_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_410455 PE=4 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 2.140e-27
Identity = 71/122 (58.20%), Postives = 85/122 (69.67%), Query Frame = 2
Query:   11 YASSMASLC-HNAFSFSP----------TKLFPIMLKPSFRCSSITTNSTPSYNSIVFETVRLLGPPTKFEASKLKVVLLEDQINRYASIIPRTYILSHCDLTANLTLAVSNVIKLEQLRGW 343
            YA  MA  C H AFS SP          TKL   + KP+   S    NS  SYN++V E VRLLGPP KFEASKLKVVL+ +++N+Y++IIPRTYILSHCD TA+LTL +SNVI L+QLRGW
Sbjct:    1 YACPMACHCAHYAFSPSPHMRYFSINNITKLSSKVTKPTVLSS--IDNSRASYNTLVSEAVRLLGPPAKFEASKLKVVLMGEEMNQYSAIIPRTYILSHCDFTADLTLIISNVINLDQLRGW 120          
BLAST of AM162161 vs. TrEMBL
Match: B9S2Q3_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0560060 PE=4 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 3.536e-22
Identity = 64/115 (55.65%), Postives = 74/115 (64.35%), Query Frame = 2
Query:   35 CHNA-FSFSP-----------TKLFPIMLKPSFRCSSITTNSTPSYNSIVFETVRLLGPPTKFEASKLKVVLLEDQINRYASIIPRTYILSHCDLTANLTLAVSNVIKLEQLRGW 343
            CH+A FS SP           TK F         CS   TN + ++N++V E VR L PP +FEASKLKVVL+EDQIN    IIPRTYILSHCD TA LTL +SNVI L+QLRGW
Sbjct:    3 CHSAAFSLSPCRDYFSINTNNTKFFKRSRPAVVICS--ITNRSANFNTLVSEAVRHLVPPARFEASKLKVVLMEDQIN---DIIPRTYILSHCDFTAELTLTISNVINLDQLRGW 112          
BLAST of AM162161 vs. TrEMBL
Match: A5BU42_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_000606 PE=4 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.425e-17
Identity = 40/64 (62.50%), Postives = 51/64 (79.69%), Query Frame = 2
Query:  152 ETVRLLGPPTKFEASKLKVVLLEDQINRYASIIPRTYILSHCDLTANLTLAVSNVIKLEQLRGW 343
            +  RLLGPP KF+ASKLKVV + ++I+ Y+ I PR Y LSHCD TANLTL +SN+I L+QL+GW
Sbjct:    9 QAARLLGPPAKFDASKLKVVPMGEEIDNYSGISPRVYTLSHCDFTANLTLTISNIISLDQLKGW 72          
BLAST of AM162161 vs. TrEMBL
Match: D7KNQ7_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_891373 PE=4 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 3.787e-16
Identity = 46/83 (55.42%), Postives = 57/83 (68.67%), Query Frame = 2
Query:  104 SSITTNSTPSYNSIVFETVRLLGPPTKFEASKLKVVLLEDQINRYAS---IIPRTYILSHCDLTANLTLAVSNVIKLEQLRGW 343
            SS  ++   SYN++V E VRLL P   F++SKLKV  L + +   +S   I PRTYILSHCD TANLTL +SNVI L+QL GW
Sbjct:   44 SSAISDGGVSYNTLVSEAVRLLVPQANFDSSKLKVEFLGELLENKSSGGIITPRTYILSHCDFTANLTLTISNVINLDQLEGW 126          
BLAST of AM162161 vs. TrEMBL
Match: Q9LNZ8_ARATH (F9C16.20 OS=Arabidopsis thaliana PE=4 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 8.436e-16
Identity = 45/83 (54.22%), Postives = 57/83 (68.67%), Query Frame = 2
Query:  104 SSITTNSTPSYNSIVFETVRLLGPPTKFEASKLKVVLLEDQINRYAS---IIPRTYILSHCDLTANLTLAVSNVIKLEQLRGW 343
            SS  ++   SYN++V E VRLL P   F++SKLKV  L + +   ++   I PRTYILSHCD TANLTL +SNVI L+QL GW
Sbjct:   46 SSAISDGGVSYNTLVSEAVRLLVPQANFDSSKLKVEFLGELLENKSNGGIITPRTYILSHCDFTANLTLTISNVINLDQLEGW 128          
BLAST of AM162161 vs. TrEMBL
Match: Q94AQ9_ARATH (Putative uncharacterized protein At1g44000 OS=Arabidopsis thaliana GN=At1g44000 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 8.436e-16
Identity = 45/83 (54.22%), Postives = 57/83 (68.67%), Query Frame = 2
Query:  104 SSITTNSTPSYNSIVFETVRLLGPPTKFEASKLKVVLLEDQINRYAS---IIPRTYILSHCDLTANLTLAVSNVIKLEQLRGW 343
            SS  ++   SYN++V E VRLL P   F++SKLKV  L + +   ++   I PRTYILSHCD TANLTL +SNVI L+QL GW
Sbjct:   46 SSAISDGGVSYNTLVSEAVRLLVPQANFDSSKLKVEFLGELLENKSNGGIITPRTYILSHCDFTANLTLTISNVINLDQLEGW 128          
BLAST of AM162161 vs. TrEMBL
Match: Q9T059_ARATH (Putative uncharacterized protein AT4g11910 OS=Arabidopsis thaliana GN=AT4g11910 PE=4 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.808e-11
Identity = 46/108 (42.59%), Postives = 59/108 (54.63%), Query Frame = 2
Query:   23 MASLCHNAFSFSPTK-LFPIMLKPSFRCSSITTNSTPSYNSIVFETVRLLGPPTKFEASKLKVVLLEDQINRYASIIPRTYILSHCDLTANLTLAVSNVIKLEQLRGW 343
            M SL  N    S  K +FP  L  S  C  +TT  +   N  +    RL GP   FEASKLKV+ L     ++ + +PRTY L+H D+TA LTLA+S  I   QL+GW
Sbjct:    1 MCSLATNLLLPSKMKPVFPEKLSTSSLC--VTTRRSKMKNRSIVPVARLFGPAI-FEASKLKVLFLGVDEKKHPAKLPRTYTLTHSDITAKLTLAISQSINNSQLQGW 105          
BLAST of AM162161 vs. TrEMBL
Match: Q66WT5_ARATH (Non-yellowing protein 2 OS=Arabidopsis thaliana GN=SGN2 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.808e-11
Identity = 46/108 (42.59%), Postives = 59/108 (54.63%), Query Frame = 2
Query:   23 MASLCHNAFSFSPTK-LFPIMLKPSFRCSSITTNSTPSYNSIVFETVRLLGPPTKFEASKLKVVLLEDQINRYASIIPRTYILSHCDLTANLTLAVSNVIKLEQLRGW 343
            M SL  N    S  K +FP  L  S  C  +TT  +   N  +    RL GP   FEASKLKV+ L     ++ + +PRTY L+H D+TA LTLA+S  I   QL+GW
Sbjct:    1 MCSLATNLLLPSKMKPVFPEKLSTSSLC--VTTRRSKMKNRSIVPVARLFGPAI-FEASKLKVLFLGVDEKKHPAKLPRTYTLTHSDITAKLTLAISQSINNSQLQGW 105          
BLAST of AM162161 vs. TrEMBL
Match: D7M0C0_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_352273 PE=4 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 8.171e-11
Identity = 45/110 (40.91%), Postives = 61/110 (55.45%), Query Frame = 2
Query:   23 MASLCHNAFSFSPTKLFPIM---LKPSFRCSSITTNSTPSYNSIVFETVRLLGPPTKFEASKLKVVLLEDQINRYASIIPRTYILSHCDLTANLTLAVSNVIKLEQLRGW 343
            M SL  N     P+K+ P++   L  S  C  +TT  +   N  +    RL GP   FEASKLKV+ L     ++ + +PRTY L+H D+TA LTLA+S  I   QL+GW
Sbjct:    1 MCSLATNLLL--PSKMKPVLPEKLSTSSLC--VTTRRSKMKNRSIVPVARLFGPAI-FEASKLKVLFLGVDEKKHPAKLPRTYTLTHSDITAKLTLAISQSINNSQLQGW 105          

HSP 2 Score: 58.5362 bits (140), Expect = 2.460e-7
Identity = 28/53 (52.83%), Postives = 38/53 (71.70%), Query Frame = 2
Query:  185 FEASKLKVVLLEDQINRYASIIPRTYILSHCDLTANLTLAVSNVIKLEQLRGW 343
            F+ASKL V+ L     ++ S +PRTY L+H D+TANLTLA+S+ I   QL+GW
Sbjct:  247 FKASKLNVMFLGVDEKKHPSNLPRTYTLTHSDITANLTLAISHSINNSQLQGW 299          
BLAST of AM162161 vs. TAIR peptide
Match: AT1G44000.1 (| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G11911.1); Has 216 Blast hits to 212 proteins in 76 species: Archae - 0; Bacteria - 96; Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). | chr1:16708201-16709521 REVERSE LENGTH=260)

HSP 1 Score: 86.6557 bits (213), Expect = 3.263e-18
Identity = 45/83 (54.22%), Postives = 57/83 (68.67%), Query Frame = 2
Query:  104 SSITTNSTPSYNSIVFETVRLLGPPTKFEASKLKVVLLEDQINRYAS---IIPRTYILSHCDLTANLTLAVSNVIKLEQLRGW 343
            SS  ++   SYN++V E VRLL P   F++SKLKV  L + +   ++   I PRTYILSHCD TANLTL +SNVI L+QL GW
Sbjct:   46 SSAISDGGVSYNTLVSEAVRLLVPQANFDSSKLKVEFLGELLENKSNGGIITPRTYILSHCDFTANLTLTISNVINLDQLEGW 128          
BLAST of AM162161 vs. TAIR peptide
Match: AT4G11910.1 (| Symbols: | INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: non-yellowing 1 (TAIR:AT4G22920.1); Has 206 Blast hits to 202 proteins in 67 species: Archae - 0; Bacteria - 86; Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). | chr4:7156435-7157839 FORWARD LENGTH=271)

HSP 1 Score: 71.633 bits (174), Expect = 1.086e-13
Identity = 46/108 (42.59%), Postives = 59/108 (54.63%), Query Frame = 2
Query:   23 MASLCHNAFSFSPTK-LFPIMLKPSFRCSSITTNSTPSYNSIVFETVRLLGPPTKFEASKLKVVLLEDQINRYASIIPRTYILSHCDLTANLTLAVSNVIKLEQLRGW 343
            M SL  N    S  K +FP  L  S  C  +TT  +   N  +    RL GP   FEASKLKV+ L     ++ + +PRTY L+H D+TA LTLA+S  I   QL+GW
Sbjct:    1 MCSLATNLLLPSKMKPVFPEKLSTSSLC--VTTRRSKMKNRSIVPVARLFGPAI-FEASKLKVLFLGVDEKKHPAKLPRTYTLTHSDITAKLTLAISQSINNSQLQGW 105          
BLAST of AM162161 vs. TAIR peptide
Match: AT4G22920.1 (| Symbols: ATNYE1, NYE1 | non-yellowing 1 | chr4:12016776-12017969 REVERSE LENGTH=268)

HSP 1 Score: 69.707 bits (169), Expect = 4.127e-13
Identity = 42/108 (38.89%), Postives = 57/108 (52.78%), Query Frame = 2
Query:   50 SFSPTKLFPIMLKPSFRCSSITTNSTPSY----------NSIVFETVRLLGPPTKFEASKLKVVLLEDQINRYASIIPRTYILSHCDLTANLTLAVSNVIKLEQLRGW 343
            S S   L P  LKP++      ++S+ S           N  +    RL GP   FE+SKLKV+ L     ++ S +PRTY L+H D+TA LTLA+S  I   QL+GW
Sbjct:    3 SLSAIMLLPTKLKPAYSDKRSNSSSSSSLFFNNRRSKKKNQSIVPVARLFGPAI-FESSKLKVLFLGVDEKKHPSTLPRTYTLTHSDITAKLTLAISQSINNSQLQGW 109          
BLAST of AM162161 vs. TAIR peptide
Match: AT4G11911.1 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G11910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr4:7158150-7159440 FORWARD LENGTH=273)

HSP 1 Score: 66.2402 bits (160), Expect = 4.563e-12
Identity = 44/104 (42.31%), Postives = 55/104 (52.88%), Query Frame = 2
Query:   50 SFSPTKLFPIMLKPSF----RCSSI--TTNSTPSYNSIVFETVRLLGPPTKFEASKLKVVLLEDQINRYASIIPRTYILSHCDLTANLTLAVSNVIKLEQLRGW 343
            S   + L P  LKP F    R SSI  TT S+      +F   RL G    FEASKL V  L     ++   +PRTY  +H D+TA LTLA+S+ I   QL+GW
Sbjct:    3 SLMASLLLPANLKPDFSDKERSSSIPSTTRSSKRKKQSMFPVARLFGQAI-FEASKLNVKFLGVDEKKHPPNLPRTYTFTHSDITAKLTLAISHSINNSQLQGW 105          
The following BLAST results are available for this feature:
BLAST of AM162161 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
C6TK97_SOYBN5.443e-3166.39Putative uncharacterized protein OS=Glycine max PE... [more]
B9GTY1_POPTR2.140e-2758.20Predicted protein (Fragment) OS=Populus trichocarp... [more]
B9S2Q3_RICCO3.536e-2255.65Putative uncharacterized protein OS=Ricinus commun... [more]
A5BU42_VITVI3.425e-1762.50Putative uncharacterized protein OS=Vitis vinifera... [more]
D7KNQ7_ARALY3.787e-1655.42Putative uncharacterized protein OS=Arabidopsis ly... [more]
Q9LNZ8_ARATH8.436e-1654.22F9C16.20 OS=Arabidopsis thaliana PE=4 SV=1[more]
Q94AQ9_ARATH8.436e-1654.22Putative uncharacterized protein At1g44000 OS=Arab... [more]
Q9T059_ARATH2.808e-1142.59Putative uncharacterized protein AT4g11910 OS=Arab... [more]
Q66WT5_ARATH2.808e-1142.59Non-yellowing protein 2 OS=Arabidopsis thaliana GN... [more]
D7M0C0_ARALY8.171e-1140.91Putative uncharacterized protein OS=Arabidopsis ly... [more]
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BLAST of AM162161 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 4
Match NameE-valueIdentityDescription
AT1G44000.13.263e-1854.22| Symbols: | unknown protein; BEST Arabidopsis th... [more]
AT4G11910.11.086e-1342.59| Symbols: | INVOLVED IN: biological_process unkn... [more]
AT4G22920.14.127e-1338.89| Symbols: ATNYE1, NYE1 | non-yellowing 1 | chr4:1... [more]
AT4G11911.14.563e-1242.31| Symbols: | unknown protein; FUNCTIONS IN: molec... [more]
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Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>AM162161 ID=AM162161; Name=AM162161; organism=Pisum sativum; type=EST; length=344bp
ACTGTATTATTATGCATCTTCAATGGCATCATTATGTCATAATGCCTTTT
CATTTTCACCTACAAAACTTTTCCCTATCATGTTAAAGCCATCTTTCAGA
TGCTCCTCCATTACTACTAATTCCACACCTTCCTACAATTCCATTGTTTT
TGAGACTGTTAGGCTATTGGGTCCTCCAACAAAATTTGAAGCTTCAAAGC
TGAAGGTTGTTCTATTGGAAGATCAGATTAACAGATATGCAAGTATTATC
CCAAGAACCTACATTCTATCCCACTGTGATTTAACAGCTAATCTCACTTT
AGCTGTTTCCAATGTCATCAAACTCGAGCAGTTGAGAGGGTGGT
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