CD860771

EST Overview


Name	CD860771
Unique Name	CD860771
Type	EST
Organism	Pisum sativum (pea)
Sequence length	384

Libraries


Library Name	Type
LIBEST_014004 TNE	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Pisum sativum unigene v1	Pisum sativum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Pisum sativum unigene v1	2010-12-27
KEGG analysis for Pisum sativum unigene v1	2011-01-05
Homology Analysis: Pisum sativum unigene v1 vs Trembl	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide	2011-02-03
InterProScan analysis for Pisum sativum unigene v1	2010-12-29

Homology

[Close]

BLAST of CD860771 vs. TrEMBL
Match: A9PAT8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_644264 PE=4 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.797e-39
Identity = 61/62 (98.39%), Postives = 61/62 (98.39%), Query Frame = -3

Query:  143 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWGCKDCGK 328
            MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIW CKDCGK
Sbjct:    1 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWSCKDCGK 62

HSP 2 Score: 54.299 bits (129), Expect = 1.797e-39
Identity = 28/31 (90.32%), Postives = 29/31 (93.55%), Query Frame = -2

Query:   54 KGQAGGAYTLNTASAVTVRSTIRRLGEQTES 146
            K +AGGAYTLNTASAVTVRSTIRRL EQTES
Sbjct:   62 KVKAGGAYTLNTASAVTVRSTIRRLREQTES 92

[Close]

BLAST of CD860771 vs. TrEMBL
Match: D7SM25_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_21.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00018328001 PE=4 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.443e-38
Identity = 59/61 (96.72%), Postives = 60/61 (98.36%), Query Frame = -3

Query:  143 TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWGCKDCGK 325
            TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSK+FCEFCGKYAVKRKAVGIW CKDCGK
Sbjct:   51 TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWACKDCGK 111

HSP 2 Score: 54.299 bits (129), Expect = 1.443e-38
Identity = 28/31 (90.32%), Postives = 29/31 (93.55%), Query Frame = -2

Query:   54 KGQAGGAYTLNTASAVTVRSTIRRLGEQTES 146
            K +AGGAYTLNTASAVTVRSTIRRL EQTES
Sbjct:  111 KVKAGGAYTLNTASAVTVRSTIRRLREQTES 141

[Close]

BLAST of CD860771 vs. TrEMBL
Match: C1MZY6_MICPS (Ribosomal protein L37ae OS=Micromonas pusilla CCMP1545 GN=MICPUCDRAFT_28424 PE=4 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.518e-31
Identity = 50/62 (80.65%), Postives = 54/62 (87.10%), Query Frame = -3

Query:  143 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWGCKDCGK 328
            M KRTKK GIVGKYGTRYGASLRK +KK EVSQHSKFFC+FCGKYA+KR+AVGIW C  C K
Sbjct:    1 MAKRTKKVGIVGKYGTRYGASLRKVVKKQEVSQHSKFFCDFCGKYAMKRQAVGIWKCAGCKK 62

HSP 2 Score: 48.9062 bits (115), Expect = 1.518e-31
Identity = 24/30 (80.00%), Postives = 27/30 (90.00%), Query Frame = -2

Query:   57 KGQAGGAYTLNTASAVTVRSTIRRLGEQTE 146
            K +AGGAYTLNT++AVTVRSTIRRL E TE
Sbjct:   62 KTKAGGAYTLNTSAAVTVRSTIRRLRENTE 91

[Close]

BLAST of CD860771 vs. TrEMBL
Match: C1EIY1_9CHLO (Ribosomal protein L37ae OS=Micromonas sp. RCC299 GN=RPL37AE PE=4 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.518e-31
Identity = 50/62 (80.65%), Postives = 54/62 (87.10%), Query Frame = -3

Query:  143 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWGCKDCGK 328
            M KRTKK GIVGKYGTRYGASLRK +KK EVSQHSKFFC+FCGKYA+KR+AVGIW C  C K
Sbjct:    1 MAKRTKKVGIVGKYGTRYGASLRKVVKKQEVSQHSKFFCDFCGKYAMKRQAVGIWKCAGCKK 62

HSP 2 Score: 48.9062 bits (115), Expect = 1.518e-31
Identity = 24/30 (80.00%), Postives = 27/30 (90.00%), Query Frame = -2

Query:   57 KGQAGGAYTLNTASAVTVRSTIRRLGEQTE 146
            K +AGGAYTLNT++AVTVRSTIRRL E TE
Sbjct:   62 KTKAGGAYTLNTSAAVTVRSTIRRLRENTE 91

[Close]

BLAST of CD860771 vs. TrEMBL
Match: B9RUR2_RICCO (60S ribosomal protein L37a, putative OS=Ricinus communis GN=RCOM_0855780 PE=4 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 1.603e-30
Identity = 64/73 (87.67%), Postives = 66/73 (90.41%), Query Frame = -3

Query:  143 VSHRFLSTHSKMTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWGCKDCGK 361
            VS +  S  +  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWGCKDCGK
Sbjct:    8 VSRKPTSPRNDWTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWGCKDCGK 80

[Close]

BLAST of CD860771 vs. TrEMBL
Match: C6SXD2_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 2.734e-30
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = -3

Query:  143 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWGCKDCGK 328
            MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWGCKDCGK
Sbjct:    1 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWGCKDCGK 62

[Close]

BLAST of CD860771 vs. TrEMBL
Match: B9SKF7_RICCO (60S ribosomal protein L37a, putative OS=Ricinus communis GN=RCOM_0658570 PE=4 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 2.734e-30
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = -3

Query:  143 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWGCKDCGK 328
            MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWGCKDCGK
Sbjct:    1 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWGCKDCGK 62

[Close]

BLAST of CD860771 vs. TrEMBL
Match: B7FGL8_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=4 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 2.734e-30
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = -3

Query:  143 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWGCKDCGK 328
            MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWGCKDCGK
Sbjct:    1 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWGCKDCGK 62

[Close]

BLAST of CD860771 vs. TrEMBL
Match: A9PAM1_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_740160 PE=4 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 2.734e-30
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = -3

Query:  143 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWGCKDCGK 328
            MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWGCKDCGK
Sbjct:    1 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWGCKDCGK 62

[Close]

BLAST of CD860771 vs. TrEMBL
Match: A9NT67_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=4 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 7.955e-30
Identity = 61/62 (98.39%), Postives = 62/62 (100.00%), Query Frame = -3

Query:  143 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWGCKDCGK 328
            MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGK+AVKRKAVGIWGCKDCGK
Sbjct:    1 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKFAVKRKAVGIWGCKDCGK 62

[Close]

BLAST of CD860771 vs. SwissProt
Match: RL37A_PSEMZ (60S ribosomal protein L37a OS=Pseudotsuga menziesii GN=RPL37A PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 3.897e-31
Identity = 61/62 (98.39%), Postives = 62/62 (100.00%), Query Frame = -3

Query:  143 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWGCKDCGK 328
            MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGK+AVKRKAVGIWGCKDCGK
Sbjct:    1 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKFAVKRKAVGIWGCKDCGK 62

HSP 2 Score: 52.373 bits (124), Expect = 8.743e-7
Identity = 29/41 (70.73%), Postives = 31/41 (75.61%), Query Frame = -2

Query:   57 GCWNLGLQRLWKGQAGGAYTLNTASAVTVRSTIRRLGEQTE 179
            G W  G +   K +AGGAYTLNT SAVTVRSTIRRL EQTE
Sbjct:   53 GIW--GCKDCGKVKAGGAYTLNTPSAVTVRSTIRRLREQTE 91

[Close]

BLAST of CD860771 vs. SwissProt
Match: RL37A_ORYSJ (60S ribosomal protein L37a OS=Oryza sativa subsp. japonica GN=Os01g0679700 PE=1 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 8.682e-31
Identity = 60/62 (96.77%), Postives = 62/62 (100.00%), Query Frame = -3

Query:  143 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWGCKDCGK 328
            MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSK+FCEFCGK+AVKRKAVGIWGCKDCGK
Sbjct:    1 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCGK 62

HSP 2 Score: 53.9138 bits (128), Expect = 3.005e-7
Identity = 29/42 (69.05%), Postives = 33/42 (78.57%), Query Frame = -2

Query:   54 GCWNLGLQRLWKGQAGGAYTLNTASAVTVRSTIRRLGEQTES 179
            G W  G +   K +AGGAYT+NTASAVTVRSTIRRL EQTE+
Sbjct:   53 GIW--GCKDCGKVKAGGAYTMNTASAVTVRSTIRRLREQTEA 92

[Close]

BLAST of CD860771 vs. SwissProt
Match: RL37A_GOSHI (60S ribosomal protein L37a OS=Gossypium hirsutum GN=RPL37A PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 2.526e-30
Identity = 60/62 (96.77%), Postives = 61/62 (98.39%), Query Frame = -3

Query:  143 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWGCKDCGK 328
            MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSK+FCEFCGKYAVKRKAVGIWGCK CGK
Sbjct:    1 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKACGK 62

HSP 2 Score: 56.225 bits (134), Expect = 6.055e-8
Identity = 31/42 (73.81%), Postives = 33/42 (78.57%), Query Frame = -2

Query:   54 GCWNLGLQRLWKGQAGGAYTLNTASAVTVRSTIRRLGEQTES 179
            G W  G +   K +AGGAYTLNTASAVTVRSTIRRL EQTES
Sbjct:   53 GIW--GCKACGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 92

[Close]

BLAST of CD860771 vs. SwissProt
Match: RL37A_BRARA (60S ribosomal protein L37a OS=Brassica rapa GN=RPL37A PE=3 SV=2)

HSP 1 Score: 127.872 bits (320), Expect = 1.637e-29
Identity = 57/62 (91.94%), Postives = 59/62 (95.16%), Query Frame = -3

Query:  143 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWGCKDCGK 328
            M KRTKK GIVGKYGTRYGAS+RKQIKKMEVSQHSK+FCEFCGKY VKRKAVGIWGCKDCGK
Sbjct:    1 MAKRTKKVGIVGKYGTRYGASIRKQIKKMEVSQHSKYFCEFCGKYGVKRKAVGIWGCKDCGK 62

[Close]

BLAST of CD860771 vs. SwissProt
Match: R37A2_ARATH (60S ribosomal protein L37a-2 OS=Arabidopsis thaliana GN=RPL37AC PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 1.637e-29
Identity = 57/62 (91.94%), Postives = 59/62 (95.16%), Query Frame = -3

Query:  143 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWGCKDCGK 328
            M KRTKK GIVGKYGTRYGAS+RKQIKKMEVSQHSK+FCEFCGKY VKRKAVGIWGCKDCGK
Sbjct:    1 MAKRTKKVGIVGKYGTRYGASIRKQIKKMEVSQHSKYFCEFCGKYGVKRKAVGIWGCKDCGK 62

[Close]

BLAST of CD860771 vs. SwissProt
Match: R37A1_ARATH (Putative 60S ribosomal protein L37a-1 OS=Arabidopsis thaliana GN=RPL37AB PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 3.648e-29
Identity = 57/62 (91.94%), Postives = 60/62 (96.77%), Query Frame = -3

Query:  143 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWGCKDCGK 328
            MTKRTKKA IVGKYGTRYGASLRKQIKKMEVSQH+K+FCEFCGKY+VKRK VGIWGCKDCGK
Sbjct:    1 MTKRTKKARIVGKYGTRYGASLRKQIKKMEVSQHNKYFCEFCGKYSVKRKVVGIWGCKDCGK 62

HSP 2 Score: 55.0694 bits (131), Expect = 1.349e-7
Identity = 30/42 (71.43%), Postives = 33/42 (78.57%), Query Frame = -2

Query:   54 GCWNLGLQRLWKGQAGGAYTLNTASAVTVRSTIRRLGEQTES 179
            G W  G +   K +AGGAYT+NTASAVTVRSTIRRL EQTES
Sbjct:   53 GIW--GCKDCGKVKAGGAYTMNTASAVTVRSTIRRLREQTES 92

[Close]

BLAST of CD860771 vs. SwissProt
Match: RL37A_DICDI (60S ribosomal protein L37a OS=Dictyostelium discoideum GN=rpl37A PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 5.655e-26
Identity = 43/62 (69.35%), Postives = 50/62 (80.65%), Query Frame = -3

Query:  143 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWGCKDCGK 328
            M KRTKK G+VGKYGTRYGASLRKQ+KKME++QH  + C FCGK AV+R +VGIW C  C K
Sbjct:    1 MAKRTKKVGVVGKYGTRYGASLRKQVKKMEITQHGTYTCSFCGKDAVRRSSVGIWKCNGCRK 62

HSP 2 Score: 36.965 bits (84), Expect = 5.655e-26
Identity = 17/24 (70.83%), Postives = 21/24 (87.50%), Query Frame = -2

Query:   66 AGGAYTLNTASAVTVRSTIRRLGE 137
            AGGA+T++TA+  TVRSTIRRL E
Sbjct:   65 AGGAWTMSTAAGATVRSTIRRLRE 88

[Close]

BLAST of CD860771 vs. SwissProt
Match: RL37A_OSTLU (60S ribosomal protein L37a OS=Ostreococcus lucimarinus (strain CCE9901) GN=RPL37a PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 1.098e-25
Identity = 51/62 (82.26%), Postives = 54/62 (87.10%), Query Frame = -3

Query:  143 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWGCKDCGK 328
            M KRTKK GIVGKYGTRYGASLRK +KK EVSQHSKFFC+FCGKY +KRKAVGIW CK C K
Sbjct:    1 MAKRTKKVGIVGKYGTRYGASLRKVVKKQEVSQHSKFFCDFCGKYGMKRKAVGIWSCKGCNK 62

[Close]

BLAST of CD860771 vs. SwissProt
Match: RL43_YEAST (60S ribosomal protein L43 OS=Saccharomyces cerevisiae GN=RPL43A PE=1 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 2.114e-25
Identity = 39/62 (62.90%), Postives = 47/62 (75.81%), Query Frame = -3

Query:  143 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWGCKDCGK 328
            M KRTKK GI GKYG RYG+SLR+Q+KK+E+ QH+++ C FCGK  VKR A GIW C  C K
Sbjct:    1 MAKRTKKVGITGKYGVRYGSSLRRQVKKLEIQQHARYDCSFCGKKTVKRGAAGIWTCSCCKK 62

HSP 2 Score: 42.743 bits (99), Expect = 2.114e-25
Identity = 21/31 (67.74%), Postives = 25/31 (80.65%), Query Frame = -2

Query:   54 KGQAGGAYTLNTASAVTVRSTIRRLGEQTES 146
            K  AGGAYT++TA+A TVRSTIRRL E  E+
Sbjct:   62 KTVAGGAYTVSTAAAATVRSTIRRLREMVEA 92

[Close]

BLAST of CD860771 vs. SwissProt
Match: RL43_CANGA (60S ribosomal protein L43 OS=Candida glabrata GN=RPL43 PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.752e-25
Identity = 39/62 (62.90%), Postives = 47/62 (75.81%), Query Frame = -3

Query:  143 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWGCKDCGK 328
            M KRTKK GI GKYG RYG+SLR+Q+KK+EV QH+++ C FCGK  V+R A GIW C  C K
Sbjct:    1 MAKRTKKVGITGKYGVRYGSSLRRQVKKLEVQQHARYDCSFCGKKTVRRGAAGIWSCHSCKK 62

HSP 2 Score: 41.5874 bits (96), Expect = 2.752e-25
Identity = 20/31 (64.52%), Postives = 25/31 (80.65%), Query Frame = -2

Query:   54 KGQAGGAYTLNTASAVTVRSTIRRLGEQTES 146
            K  AGGAYT++TA+A TVRSTIRRL +  E+
Sbjct:   62 KTVAGGAYTVSTAAAATVRSTIRRLRDMVEA 92

[Close]

BLAST of CD860771 vs. TAIR peptide
Match: AT3G60245.1 (| Symbols: | Zinc-binding ribosomal protein family protein | chr3:22268803-22269750 FORWARD LENGTH=92)

HSP 1 Score: 127.872 bits (320), Expect = 1.582e-30
Identity = 57/62 (91.94%), Postives = 59/62 (95.16%), Query Frame = -3

Query:  143 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWGCKDCGK 328
            M KRTKK GIVGKYGTRYGAS+RKQIKKMEVSQHSK+FCEFCGKY VKRKAVGIWGCKDCGK
Sbjct:    1 MAKRTKKVGIVGKYGTRYGASIRKQIKKMEVSQHSKYFCEFCGKYGVKRKAVGIWGCKDCGK 62

HSP 2 Score: 51.2174 bits (121), Expect = 1.882e-7
Identity = 28/41 (68.29%), Postives = 31/41 (75.61%), Query Frame = -2

Query:   57 GCWNLGLQRLWKGQAGGAYTLNTASAVTVRSTIRRLGEQTE 179
            G W  G +   K +AGGAYT+NTASAVTVRSTIRRL EQ E
Sbjct:   53 GIW--GCKDCGKVKAGGAYTMNTASAVTVRSTIRRLREQIE 91

[Close]

BLAST of CD860771 vs. TAIR peptide
Match: AT3G10950.1 (| Symbols: | Zinc-binding ribosomal protein family protein | chr3:3423893-3424566 FORWARD LENGTH=92)

HSP 1 Score: 126.716 bits (317), Expect = 3.524e-30
Identity = 57/62 (91.94%), Postives = 60/62 (96.77%), Query Frame = -3

Query:  143 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWGCKDCGK 328
            MTKRTKKA IVGKYGTRYGASLRKQIKKMEVSQH+K+FCEFCGKY+VKRK VGIWGCKDCGK
Sbjct:    1 MTKRTKKARIVGKYGTRYGASLRKQIKKMEVSQHNKYFCEFCGKYSVKRKVVGIWGCKDCGK 62

HSP 2 Score: 55.0694 bits (131), Expect = 1.303e-8
Identity = 30/42 (71.43%), Postives = 33/42 (78.57%), Query Frame = -2

Query:   54 GCWNLGLQRLWKGQAGGAYTLNTASAVTVRSTIRRLGEQTES 179
            G W  G +   K +AGGAYT+NTASAVTVRSTIRRL EQTES
Sbjct:   53 GIW--GCKDCGKVKAGGAYTMNTASAVTVRSTIRRLREQTES 92

The following BLAST results are available for this feature:

BLAST of CD860771 vs. TrEMBL
BLAST of CD860771 vs. SwissProt
BLAST of CD860771 vs. TAIR peptide

BLAST of CD860771 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
A9PAT8_POPTR	1.797e-39	98.39	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
D7SM25_VITVI	1.443e-38	96.72	Whole genome shotgun sequence of line PN40024, sca...	[more]
C1MZY6_MICPS	1.518e-31	80.65	Ribosomal protein L37ae OS=Micromonas pusilla CCMP...	[more]
C1EIY1_9CHLO	1.518e-31	80.65	Ribosomal protein L37ae OS=Micromonas sp. RCC299 G...	[more]
B9RUR2_RICCO	1.603e-30	87.67	60S ribosomal protein L37a, putative OS=Ricinus co...	[more]
C6SXD2_SOYBN	2.734e-30	100.00	Putative uncharacterized protein OS=Glycine max PE...	[more]
B9SKF7_RICCO	2.734e-30	100.00	60S ribosomal protein L37a, putative OS=Ricinus co...	[more]
B7FGL8_MEDTR	2.734e-30	100.00	Putative uncharacterized protein OS=Medicago trunc...	[more]
A9PAM1_POPTR	2.734e-30	100.00	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
A9NT67_PICSI	7.955e-30	98.39	Putative uncharacterized protein OS=Picea sitchens...	[more]

BLAST of CD860771 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
RL37A_PSEMZ	3.897e-31	98.39	60S ribosomal protein L37a OS=Pseudotsuga menziesi...	[more]
RL37A_ORYSJ	8.682e-31	96.77	60S ribosomal protein L37a OS=Oryza sativa subsp. ...	[more]
RL37A_GOSHI	2.526e-30	96.77	60S ribosomal protein L37a OS=Gossypium hirsutum G...	[more]
RL37A_BRARA	1.637e-29	91.94	60S ribosomal protein L37a OS=Brassica rapa GN=RPL...	[more]
R37A2_ARATH	1.637e-29	91.94	60S ribosomal protein L37a-2 OS=Arabidopsis thalia...	[more]
R37A1_ARATH	3.648e-29	91.94	Putative 60S ribosomal protein L37a-1 OS=Arabidops...	[more]
RL37A_DICDI	5.655e-26	69.35	60S ribosomal protein L37a OS=Dictyostelium discoi...	[more]
RL37A_OSTLU	1.098e-25	82.26	60S ribosomal protein L37a OS=Ostreococcus lucimar...	[more]
RL43_YEAST	2.114e-25	62.90	60S ribosomal protein L43 OS=Saccharomyces cerevis...	[more]
RL43_CANGA	2.752e-25	62.90	60S ribosomal protein L43 OS=Candida glabrata GN=R...	[more]

BLAST of CD860771 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 2


Match Name	E-value	Identity	Description
AT3G60245.1	1.582e-30	91.94	\| Symbols: \| Zinc-binding ribosomal protein famil...	[more]
AT3G10950.1	3.524e-30	91.94	\| Symbols: \| Zinc-binding ribosomal protein famil...	[more]

InterPro

Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 23..34 score
None	No IPR available	PANTHER	PTHR11517:SF1	60S RIBOSOMAL PROTEIN L37A	coord: 20..81 score: 6.6
IPR002674	Ribosomal protein L37ae	PANTHER	PTHR11517	60S RIBOSOMAL PROTEIN L37A	coord: 20..81 score: 6.6
IPR002674	Ribosomal protein L37ae	PFAM	PF01780	Ribosomal_L37ae	coord: 20..81 score: 8
IPR011331	Ribosomal protein L37ae/L37e, N-terminal domain	GENE3D	2.20.25.30	no description	coord: 28..81 score: 1.6
IPR011332	Ribosomal protein, zinc-binding domain	SUPERFAMILY	57829	Zn-binding ribosomal proteins	coord: 28..81 score: 1.7

Properties


Property Name	Value
Singlet in analysis	Pisum sativum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CD860771 ID=CD860771; Name=CD860771; organism=Pisum sativum; type=EST; length=384bp
ACAAGATTTTCAAAACAAAACAACAAAATTGATTGAAAACTGGTTCCTTT
CTAACTCTCAGTCTGCTCCCCCAACCTTCGGATGGTGCTCCTAACAGTGA
CAGCACTGGCAGTATTCAAAGTGTAAGCACCACCAGCCTGACCTTTCCAC
AATCTTTGCAGCCCCAAATTCCAACAGCCTTTCTCTTAACAGCATACTTT
CCACAAAACTCGCAGAAAAATTTACTGTGCTGACTGACTTCCATCTTCTT
AATTTGCTTCCTCAAACTAGCACCATATCGGGTGCCGTATTTGCCAACAA
TACCGGCCTTCTTGGTTCTCTTAGTCATTTTGGAGTGGGTTGAAAGGAAT
CGGTGAGAAACGAAGACCTCGGCCGCGACCACGC

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular anatomical structure
GO:0005840	ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **INTERPRO**
Term	Definition
IPR002674	Ribosomal_eL43
IPR011331	Ribosomal_eL37/eL43
IPR011332	Ribosomal_zn-bd

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