FG529814

EST Overview
NameFG529814
Unique NameFG529814
TypeEST
OrganismPisum sativum (pea)
Sequence length590
Libraries
Library NameType
LIBEST_023217 MeriP Pisum sativum Shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Pisum sativum unigene v12010-12-29
Homology
BLAST of FG529814 vs. TrEMBL
Match: C6THJ2_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.199e-17
Identity = 49/90 (54.44%), Postives = 55/90 (61.11%), Query Frame = 1
Query:    4 KIGLTETINSGIETFKSVDEKYHVTDITKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYFAKGALWVSDMLSRAAKSAADLGHHQNK 273
            KIGLT+TINSGIETFKSVDEKYHVTD TKS                               YFAKG LWVSD+L+RAAK+AADLG ++ K
Sbjct:  169 KIGLTDTINSGIETFKSVDEKYHVTDFTKSATTVTGTTAIVVASVTGKAAVAAGTAIANSSYFAKGTLWVSDVLTRAAKAAADLGQNEKK 258          
BLAST of FG529814 vs. TrEMBL
Match: B9RUQ0_RICCO (Nucleic acid binding protein, putative OS=Ricinus communis GN=RCOM_0855350 PE=4 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.047e-12
Identity = 40/89 (44.94%), Postives = 51/89 (57.30%), Query Frame = 1
Query:    4 KIGLTETINSGIETFKSVDEKYHVTDITKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYFAKGALWVSDMLSRAAKSAADLGHHQN 270
            +IGLTE I +G+ET +SVDEKYHV++IT S                               YFAKGALWVSD+L RAA++AAD GH ++
Sbjct:  150 RIGLTEKIQAGMETLRSVDEKYHVSNITASAILVTGTAAVVAATYTGKAAVAAANAVANSSYFAKGALWVSDVLIRAAQAAADFGHSKD 238          
BLAST of FG529814 vs. TrEMBL
Match: Q2HVR6_MEDTR (RNA-binding region RNP-1 (RNA recognition motif) OS=Medicago truncatula GN=MtrDRAFT_AC148762g25v2 PE=4 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 5.285e-12
Identity = 41/73 (56.16%), Postives = 42/73 (57.53%), Query Frame = 1
Query:    4 KIGLTETINSGIETFKSVDEKYHVTDITKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYFAKGALWVSDM 222
            KIGLTETINSGIETFKSVDEKYHVTDITKS                               YFAKGALWVSD+
Sbjct:  166 KIGLTETINSGIETFKSVDEKYHVTDITKSAATVTGTTAIVVATVTGRAAMAAGSAIANSSYFAKGALWVSDI 238          
BLAST of FG529814 vs. TrEMBL
Match: B9IJW1_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_259036 PE=4 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.438e-10
Identity = 36/85 (42.35%), Postives = 48/85 (56.47%), Query Frame = 1
Query:    4 KIGLTETINSGIETFKSVDEKYHVTDITKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYFAKGALWVSDMLSRAAKSAADLG 258
            +IGLT+ I +G+ET K VDEKYHV++ TKS                               YFAKGALWVS +L++AA++AAD+G
Sbjct:  164 RIGLTDKIYAGMETVKCVDEKYHVSEFTKSAASVTGTAAVSAATFTGKTAVAAANAVVNSTYFAKGALWVSGVLTQAAEAAADMG 248          
BLAST of FG529814 vs. TrEMBL
Match: D7SX90_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_108.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00011379001 PE=4 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 1.880e-9
Identity = 38/90 (42.22%), Postives = 49/90 (54.44%), Query Frame = 1
Query:    4 KIGLTETINSGIETFKSVDEKYHVTDITKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYFAKGALWVSDMLSRAAKSAADLGHHQNK 273
            +IGLT+ I +G+E  +SVDEKYH+ + TKS                               YFAKGALWVS +L+RAA +AADLG+  NK
Sbjct:  156 RIGLTDKIYAGVEAVRSVDEKYHLLEFTKSAAVVTGKTTVAAANAFVNSS-----------YFAKGALWVSGILTRAANAAADLGNKGNK 234          
BLAST of FG529814 vs. TrEMBL
Match: B9S290_RICCO (Nucleic acid binding protein, putative OS=Ricinus communis GN=RCOM_0697220 PE=4 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 1.591e-8
Identity = 36/85 (42.35%), Postives = 47/85 (55.29%), Query Frame = 1
Query:    4 KIGLTETINSGIETFKSVDEKYHVTDITKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYFAKGALWVSDMLSRAAKSAADLG 258
            +IGL + I +G+E  KSVD+KYHV+D+TKS                               YF+KGALWVS  L+RAAK+AAD+G
Sbjct:  166 RIGLADKIFAGMEAMKSVDQKYHVSDMTKS-----------AVSATGRTAVAAASTVVNSSYFSKGALWVSGALNRAAKAAADIG 239          
BLAST of FG529814 vs. TrEMBL
Match: Q9MAD0_ARATH (T4P13.10 protein OS=Arabidopsis thaliana GN=At3g01210 PE=4 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 1.032e-7
Identity = 33/84 (39.29%), Postives = 40/84 (47.62%), Query Frame = 1
Query:    7 IGLTETINSGIETFKSVDEKYHVTDITKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYFAKGALWVSDMLSRAAKSAADLG 258
            +GLT+ I S +E  +S DEKYH +D TKS                               YFA GALW SD L RAAK+AA +G
Sbjct:  161 LGLTQNIQSSMELVRSADEKYHFSDFTKSAVLVTGTAAVAAATITGKVAAAAATSVVNSRYFANGALWFSDALGRAAKAAAHIG 244          
BLAST of FG529814 vs. TrEMBL
Match: Q8GWX3_ARATH (At3g01210 OS=Arabidopsis thaliana GN=At3g01210/T4P13_10 PE=2 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 1.032e-7
Identity = 33/84 (39.29%), Postives = 40/84 (47.62%), Query Frame = 1
Query:    7 IGLTETINSGIETFKSVDEKYHVTDITKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYFAKGALWVSDMLSRAAKSAADLG 258
            +GLT+ I S +E  +S DEKYH +D TKS                               YFA GALW SD L RAAK+AA +G
Sbjct:  103 LGLTQNIQSSMELVRSADEKYHFSDFTKSAVLVTGTAAVAAATITGKVAAAAATSVVNSRYFANGALWFSDALGRAAKAAAHIG 186          
BLAST of FG529814 vs. TrEMBL
Match: B9IJW2_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_908030 PE=4 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 1.032e-7
Identity = 35/85 (41.18%), Postives = 46/85 (54.12%), Query Frame = 1
Query:    4 KIGLTETINSGIETFKSVDEKYHVTDITKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYFAKGALWVSDMLSRAAKSAADLG 258
            +IGL + I +G+ET K VDEKYHV++ TKS                               YF KGALWVS +L++AA++AADLG
Sbjct:  164 RIGLADKIFAGMETVKGVDEKYHVSEFTKS----------------------AANAVVNSPYFTKGALWVSGVLTQAAEAAADLG 226          
BLAST of FG529814 vs. TrEMBL
Match: D7LAH9_ARALY (Nucleic acid binding protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_477407 PE=4 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 2.298e-7
Identity = 33/83 (39.76%), Postives = 39/83 (46.99%), Query Frame = 1
Query:    7 IGLTETINSGIETFKSVDEKYHVTDITKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYFAKGALWVSDMLSRAAKSAADL 255
            IGLT+ I S +E  +S DEKYH +D TKS                               YFA GALW SD L RAAK+AA +
Sbjct:  161 IGLTQNIQSSMEVVRSADEKYHFSDFTKSAVLVTGTAAVAAATITGKVAAAAATSVVNSRYFANGALWFSDALGRAAKAAAHM 243          
BLAST of FG529814 vs. TAIR peptide
Match: AT3G01210.1 (| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr3:72182-73159 FORWARD LENGTH=249)

HSP 1 Score: 60.4622 bits (145), Expect = 7.858e-10
Identity = 33/84 (39.29%), Postives = 40/84 (47.62%), Query Frame = 1
Query:    7 IGLTETINSGIETFKSVDEKYHVTDITKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYFAKGALWVSDMLSRAAKSAADLG 258
            +GLT+ I S +E  +S DEKYH +D TKS                               YFA GALW SD L RAAK+AA +G
Sbjct:  161 LGLTQNIQSSMELVRSADEKYHFSDFTKSAVLVTGTAAVAAATITGKVAAAAATSVVNSRYFANGALWFSDALGRAAKAAAHIG 244          
BLAST of FG529814 vs. TAIR peptide
Match: AT1G14340.1 (| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr1:4897709-4898776 FORWARD LENGTH=244)

HSP 1 Score: 52.7582 bits (125), Expect = 1.638e-7
Identity = 30/85 (35.29%), Postives = 42/85 (49.41%), Query Frame = 1
Query:    4 KIGLTETINSGIETFKSVDEKYHVTDITKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYFAKGALWVSDMLSRAAKSAADLG 258
            +IGLT+ I +G+E  +  D++YHV+D  KS                               YF+ GALW+S  L RAAK+A+DLG
Sbjct:  165 RIGLTDKIFTGLEAVRMTDQRYHVSDTAKSAVFATGRTAAAAATSVVNSS-----------YFSSGALWLSGALERAAKAASDLG 238          
The following BLAST results are available for this feature:
BLAST of FG529814 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
C6THJ2_SOYBN3.199e-1754.44Putative uncharacterized protein OS=Glycine max PE... [more]
B9RUQ0_RICCO4.047e-1244.94Nucleic acid binding protein, putative OS=Ricinus ... [more]
Q2HVR6_MEDTR5.285e-1256.16RNA-binding region RNP-1 (RNA recognition motif) O... [more]
B9IJW1_POPTR8.438e-1042.35Predicted protein (Fragment) OS=Populus trichocarp... [more]
D7SX90_VITVI1.880e-942.22Whole genome shotgun sequence of line PN40024, sca... [more]
B9S290_RICCO1.591e-842.35Nucleic acid binding protein, putative OS=Ricinus ... [more]
Q9MAD0_ARATH1.032e-739.29T4P13.10 protein OS=Arabidopsis thaliana GN=At3g01... [more]
Q8GWX3_ARATH1.032e-739.29At3g01210 OS=Arabidopsis thaliana GN=At3g01210/T4P... [more]
B9IJW2_POPTR1.032e-741.18Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
D7LAH9_ARALY2.298e-739.76Nucleic acid binding protein OS=Arabidopsis lyrata... [more]
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BLAST of FG529814 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT3G01210.17.858e-1039.29| Symbols: | RNA-binding (RRM/RBD/RNP motifs) fam... [more]
AT1G14340.11.638e-735.29| Symbols: | RNA-binding (RRM/RBD/RNP motifs) fam... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001395Aldo/keto reductasePANTHERPTHR11732ALDO/KETO REDUCTASEcoord: 2..86
score: 4.3
NoneNo IPR availablePANTHERPTHR11732:SF1ALDO/KETO REDUCTASEcoord: 2..86
score: 4.3
NoneNo IPR availableSEGsegsegcoord: 32..62
score
NoneNo IPR availableSEGsegsegcoord: 22..36
score

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FG529814 ID=FG529814; Name=FG529814; organism=Pisum sativum; type=EST; length=590bp
TACAAAATTGGATTAACAGAAACCATAAATTCAGGTATCGAAACTTTCAA
ATCTGTTGACGAGAAGTATCATGTTACAGATATCACGAAATCGGCCGCAG
CGGTTACAGGGACGACAGCTATAGTTGTGGCAACAGTTACTGGAAGAGCA
GCTGTGGCTGCGAGTAATGCTATAGTCAATAGCAGCTACTTTGCGAAAGG
AGCTCTTTGGGTTTCGGATATGTTATCTCGTGCGGCAAAGTCAGCCGCCG
ATTTGGGTCACCATCAAAACAAATGAAACTCGAAAACGTACATGGCTCGG
TCTATTATGTTTGGTTGTTGTACACAAACAAATCGGAACAAATATTCGGT
GATACTGTATCGGTTTGACGTTACTTATCTGGTGCAAATGTTGATACCAG
AGGATCCATGATAAGTTGCAACTGTATCCTTTTAGAAATCACCAAACAAA
ACATAGTTATTTGTATGTATTGAGTTTCCTCATGTCTATTGTTGTGTTAA
TAACTAGTTTTGTTAAGTTTAATTACTATGTACTGACAACTTAATATGTT
GTTATACATTGTTATATGTCTAAGTCCACTCATATTTTAC
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0055114obsolete oxidation-reduction process
Vocabulary: INTERPRO
TermDefinition
IPR001395Aldo/ket_red/Kv-b