FG535907

EST Overview
NameFG535907
Unique NameFG535907
TypeEST
OrganismPisum sativum (pea)
Sequence length612
Libraries
Library NameType
LIBEST_023215 MeriZ Pisum sativum Shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Pisum sativum unigene v12010-12-29
Homology
BLAST of FG535907 vs. TrEMBL
Match: B9RTZ8_RICCO (Brushy protein, putative OS=Ricinus communis GN=RCOM_1457540 PE=4 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.966e-16
Identity = 52/115 (45.22%), Postives = 65/115 (56.52%), Query Frame = 1
Query:   22 KVDDNQEVLCSLDTFANQLXXXXXXXXXXXXXSG--IDDSCASSCQRTSSPECQFTQQFSTAIAKAKNLQLLDLSNNSFSAQASETFYC*WTSLRPLS-SHRHVAKHIIHFSTTE 357
            K D N E LC+++T  NQL             +G   DDSC SS Q+ SS ECQF Q+ S AI+ AK L+LLDLSNN FS   +ET    W+S      S RH+   IIHFS ++
Sbjct: 1200 KADINHEALCAVNTDCNQLEVADSEDNEIRVEAGPEFDDSCTSSSQKNSSLECQFIQELSAAISMAKQLKLLDLSNNGFSNPVAETLSNAWSSRFTTDVSWRHIKDQIIHFSMSD 1314          
BLAST of FG535907 vs. TrEMBL
Match: B9HEJ0_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_763986 PE=4 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.411e-13
Identity = 44/111 (39.64%), Postives = 61/111 (54.95%), Query Frame = 1
Query:   28 DDNQEVLCSLDTFANQLXXXXXXXXXXXXX---SGIDDSCASSCQRTSSPECQFTQQFSTAIAKAKNLQLLDLSNNSFSAQASETFYC*WTS-LRPLSSHRHVAKHIIHFS 348
            D +++ +C ++T  NQL                S  DDSC SSCQ+ S  ECQF Q+ +TAI+ AK LQ ++L NN F+ Q +E  Y  W+S L    + RH+    IHFS
Sbjct: 1227 DSDKQGVCVMNTECNQLEVADSEDGPIRAEAAPSDFDDSCTSSCQKNSLLECQFIQELTTAISMAKQLQFMELGNNGFTTQVAEALYTAWSSRLENGLAWRHIEDQTIHFS 1337          
BLAST of FG535907 vs. TrEMBL
Match: Q0DWZ8_ORYSJ (Os02g0784100 protein OS=Oryza sativa subsp. japonica GN=Os02g0784100 PE=4 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 7.244e-10
Identity = 35/79 (44.30%), Postives = 47/79 (59.49%), Query Frame = 1
Query:  118 SGIDDSCASSCQRTSSPECQFTQQFSTAIAKAKNLQLLDLSNNSFSAQASETFYC*WTS--LRPLSSHRHVAKHIIHFS 348
            +G D SCASSCQR SS  C   Q+ + AI  AK L++LDLS N  S +  ++ Y  W S       + RHVAK ++HF+
Sbjct: 1206 TGSDGSCASSCQRNSSSGCHAIQELADAIISAKQLKVLDLSRNGLSEEDIQSLYSAWASGPRGDGMARRHVAKEVVHFA 1284          
BLAST of FG535907 vs. TrEMBL
Match: D7U4H8_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_44.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00026545001 PE=4 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.244e-10
Identity = 43/106 (40.57%), Postives = 55/106 (51.89%), Query Frame = 1
Query:   37 QEVLCSLDTFANQLXXXXXXXXXXXXX--SGIDDSCASSCQRTSS-PECQFTQQFSTAIAKAKNLQLLDLSNNSFSAQASETFYC*WT-SLRPLSSHRHVAKHIIH 342
            QE  C ++T  NQL               +  DDSC +SC+R     E +F Q  STAI  AK LQLLDLSNN FS Q +ET Y  W+   R   + RH+ +  +H
Sbjct: 1219 QEGSCIMNTDYNQLEVADSEDDPITAEPAASYDDSCTNSCKRMLQFSESEFIQGLSTAIGMAKKLQLLDLSNNGFSTQDTETIYTAWSLGSRSGLAQRHIKEQTVH 1324          
BLAST of FG535907 vs. TrEMBL
Match: B9F3L7_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_08632 PE=4 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.244e-10
Identity = 35/79 (44.30%), Postives = 47/79 (59.49%), Query Frame = 1
Query:  118 SGIDDSCASSCQRTSSPECQFTQQFSTAIAKAKNLQLLDLSNNSFSAQASETFYC*WTS--LRPLSSHRHVAKHIIHFS 348
            +G D SCASSCQR SS  C   Q+ + AI  AK L++LDLS N  S +  ++ Y  W S       + RHVAK ++HF+
Sbjct: 1196 TGSDGSCASSCQRNSSSGCHAIQELADAIISAKQLKVLDLSRNGLSEEDIQSLYSAWASGPRGDGMARRHVAKEVVHFA 1274          
BLAST of FG535907 vs. TrEMBL
Match: Q6K7E5_ORYSJ (BRUSHY1-like OS=Oryza sativa subsp. japonica GN=OJ1311_D08.11 PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 2.108e-9
Identity = 34/79 (43.04%), Postives = 47/79 (59.49%), Query Frame = 1
Query:  118 SGIDDSCASSCQRTSSPECQFTQQFSTAIAKAKNLQLLDLSNNSFSAQASETFYC*WTS--LRPLSSHRHVAKHIIHFS 348
            +G D SCASSCQR SS  C   Q+ + AI  AK L++LDLS N  S +  ++ Y  W S       + +HVAK ++HF+
Sbjct:  344 TGPDGSCASSCQRNSSSGCHAIQELADAIISAKQLKVLDLSRNGLSEEDIQSLYSAWASGPRGDGMARKHVAKEVVHFA 422          
BLAST of FG535907 vs. TrEMBL
Match: B9F3L2_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_08626 PE=4 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 2.108e-9
Identity = 34/79 (43.04%), Postives = 47/79 (59.49%), Query Frame = 1
Query:  118 SGIDDSCASSCQRTSSPECQFTQQFSTAIAKAKNLQLLDLSNNSFSAQASETFYC*WTS--LRPLSSHRHVAKHIIHFS 348
            +G D SCASSCQR SS  C   Q+ + AI  AK L++LDLS N  S +  ++ Y  W S       + +HVAK ++HF+
Sbjct: 1249 TGPDGSCASSCQRNSSSGCHAIQELADAIISAKQLKVLDLSRNGLSEEDIQSLYSAWASGPRGDGMARKHVAKEVVHFA 1327          
BLAST of FG535907 vs. TrEMBL
Match: C5XTP9_SORBI (Putative uncharacterized protein Sb04g035180 OS=Sorghum bicolor GN=Sb04g035180 PE=4 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 1.973e-7
Identity = 31/79 (39.24%), Postives = 46/79 (58.23%), Query Frame = 1
Query:  118 SGIDDSCASSCQRTSSPECQFTQQFSTAIAKAKNLQLLDLSNNSFSAQASETFYC*WTSL--RPLSSHRHVAKHIIHFS 348
            SG   SCASS Q+ S   CQ  ++ + A+  AK L++LDLS N  S +A ++ Y  W S+      + +HV K ++HFS
Sbjct: 1195 SGPHRSCASSSQKNSYSSCQIIEELAEALISAKQLKVLDLSCNGLSEEAIQSLYSAWASVPRGDGMARKHVNKEVVHFS 1273          
BLAST of FG535907 vs. TrEMBL
Match: Q6K7D3_ORYSJ (Putative BRUSHY1 OS=Oryza sativa subsp. japonica GN=OJ1311_D08.35 PE=4 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 5.740e-7
Identity = 28/59 (47.46%), Postives = 36/59 (61.02%), Query Frame = 1
Query:  118 SGIDDSCASSCQRTSSPECQFTQQFSTAIAKAKNLQLLDLSNNSFSAQASETFYC*WTS 294
            +G D SCASSCQR SS  C   Q+ + AI  AK L++LDLS N  S +  ++ Y  W S
Sbjct: 1254 TGSDGSCASSCQRNSSSGCHAIQELADAIISAKQLKVLDLSRNGLSEEDIQSLYSAWAS 1312          
BLAST of FG535907 vs. TAIR peptide
Match: AT3G18730.1 (| Symbols: TSK, MGO3, BRU1 | tetratricopeptide repeat (TPR)-containing protein | chr3:6446062-6453045 REVERSE LENGTH=1311)

HSP 1 Score: 52.7582 bits (125), Expect = 1.746e-7
Identity = 28/76 (36.84%), Postives = 44/76 (57.89%), Query Frame = 1
Query:  124 IDDSCASSCQRTSSPECQFTQQFSTAIAKAKNLQLLDLSNNSFSAQASETFYC*W--TSLRPLSSHRHVAKHIIHF 345
            I++  A+S   +   +    ++ STA++ A  L++LDLSNN FS +A ET Y  W  +S R   + RHV +  +HF
Sbjct: 1219 IEEGTATSSSLSLPRKNHIVKELSTALSMANQLKILDLSNNGFSVEALETLYMSWSSSSSRTGIAQRHVKEETVHF 1294          
The following BLAST results are available for this feature:
BLAST of FG535907 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 9
Match NameE-valueIdentityDescription
B9RTZ8_RICCO3.966e-1645.22Brushy protein, putative OS=Ricinus communis GN=RC... [more]
B9HEJ0_POPTR1.411e-1339.64Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
Q0DWZ8_ORYSJ7.244e-1044.30Os02g0784100 protein OS=Oryza sativa subsp. japoni... [more]
D7U4H8_VITVI7.244e-1040.57Whole genome shotgun sequence of line PN40024, sca... [more]
B9F3L7_ORYSJ7.244e-1044.30Putative uncharacterized protein OS=Oryza sativa s... [more]
Q6K7E5_ORYSJ2.108e-943.04BRUSHY1-like OS=Oryza sativa subsp. japonica GN=OJ... [more]
B9F3L2_ORYSJ2.108e-943.04Putative uncharacterized protein OS=Oryza sativa s... [more]
C5XTP9_SORBI1.973e-739.24Putative uncharacterized protein Sb04g035180 OS=So... [more]
Q6K7D3_ORYSJ5.740e-747.46Putative BRUSHY1 OS=Oryza sativa subsp. japonica G... [more]
back to top
BLAST of FG535907 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT3G18730.11.746e-736.84| Symbols: TSK, MGO3, BRU1 | tetratricopeptide rep... [more]
back to top
InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 27..39
score
NoneNo IPR availableSEGsegsegcoord: 18..29
score: NAcoord: 36..53
score

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FG535907 ID=FG535907; Name=FG535907; organism=Pisum sativum; type=EST; length=612bp
GACCAGAAACTTGATACTCTGAAAGTGGATGATAATCAAGAGGTGTTATG
CTCTCTAGATACTTTTGCCAATCAGCTGGAAGTTGCTGATAGTGAAGAAA
GGGCAGAAGCTGCTGCTTCTGGAATTGACGACAGCTGTGCTAGTTCATGT
CAAAGAACATCATCTCCTGAGTGCCAATTCACTCAACAATTTTCAACTGC
TATTGCAAAGGCAAAGAACTTACAATTACTAGACCTTAGCAATAACAGTT
TTTCTGCACAAGCTTCAGAAACATTCTATTGTTAGTGGACAAGTTTACGA
CCCCTTTCAAGTCACAGGCACGTAGCCAAGCATATTATTCATTTCTCAAC
TACGGAAAAGAAGTGCTGCAGTGTGAAACCGTGCTGTAAGAAAATTTGAT
CCCTGACACCCATGTTAATATACTGGCTAAAGAATAAATGGCAATTCTCC
CGTCAACAAAAACATTTTTATGAACAAAAGTGCGAAGCTTTATACATATA
TCCATATTCAACCGTTATAATTTATGAACATTAATTGTAAGGAAGTACAG
GTCTTTCGGTTTCATTTATCATGTAAAACTTATTTATAAATTAACCTTTA
TTTATTTATGTC
back to top