FG536159

EST Overview
NameFG536159
Unique NameFG536159
TypeEST
OrganismPisum sativum (pea)
Sequence length564
Libraries
Library NameType
LIBEST_023215 MeriZ Pisum sativum Shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
InterProScan analysis for Pisum sativum unigene v12010-12-29
Homology
BLAST of FG536159 vs. TrEMBL
Match: B7FKM6_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 3.103e-40
Identity = 88/113 (77.88%), Postives = 95/113 (84.07%), Query Frame = 3
Query:    3 GIKSDSKRSYDQLNEPPTVSAASPAAIDEVGEHRDIDIDDLFGSGTPEDDN------NVEEKDNVGFDMNVPITVDEIADVDDSGDEVDKGPNAAEALRAQVNAEGKGEETST 323
            GIK DSKRS D L E PTVSA SPAAI+ V EHR+IDI+DLFGSGTP DDN      NVEEKDNVGFDMNVP+T DEIADVDDSGDEVDKGPNAAEALRA +NAEG+ E+TST
Sbjct:  179 GIKFDSKRSSDHLAELPTVSATSPAAINGVEEHREIDINDLFGSGTPGDDNDIEERDNVEEKDNVGFDMNVPLTDDEIADVDDSGDEVDKGPNAAEALRAHMNAEGREEQTST 291          
BLAST of FG536159 vs. TrEMBL
Match: C6TAA1_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 6.056e-36
Identity = 81/107 (75.70%), Postives = 89/107 (83.18%), Query Frame = 3
Query:    3 GIKSDSKRSYDQLNEPPTVSAASPAAIDEVGEHRDIDIDDLFGSGTPEDDNNVEEKDNVGFDMNVPITVDEIADVDDSGDEVDKGPNAAEALRAQVNAEGKGEETST 323
            GIKS SKRS+D LNE P  +  SP A +EV EH+DIDI DLFGS TPEDD+NVEEKDNVGFD+NVP T DEIADVDDSGDEVDKGPNAAEAL  QVNA G+ E+TST
Sbjct:  177 GIKSGSKRSFDHLNELPINT--SPDAKNEVEEHQDIDIHDLFGSETPEDDHNVEEKDNVGFDVNVPHTDDEIADVDDSGDEVDKGPNAAEALEDQVNALGRDEQTST 281          
BLAST of FG536159 vs. TrEMBL
Match: B9HJ94_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_832747 PE=4 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 8.765e-27
Identity = 62/110 (56.36%), Postives = 83/110 (75.45%), Query Frame = 3
Query:    3 GIKSDSKRSYDQLNEPPTVSAASPAAIDEVGEHRDIDIDDLFGSGTPEDDNNVEEKDNVGFDMNVP---ITVDEIADVDDSGDEVDKGPNAAEALRAQVNAEGKGEETST 323
            G K+ S+   +    PP VS +SP+  ++V EH+DIDI+D+FG+G+P+D N +EEK + GFD+NVP    T DEIADVDDSGDE DKG NAAEALRAQ NA+G+ ++TS+
Sbjct:  168 GTKAASRGITEYPTRPPNVSTSSPSPRNDVEEHQDIDIEDIFGAGSPDDGNAIEEKVDAGFDINVPQQNNTDDEIADVDDSGDEADKGLNAAEALRAQKNADGRDKQTSS 277          
BLAST of FG536159 vs. TrEMBL
Match: A9PG79_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.234e-22
Identity = 59/111 (53.15%), Postives = 78/111 (70.27%), Query Frame = 3
Query:    3 GIKSDSKRSYDQLNEPPTVSAASPAAI-DEVGEHRDIDIDDLFGSGTPEDDNNVEEKDNVGFDMNVPI---TVDEIADVDDSGDEVDKGPNAAEALRAQVNAEGKGEETST 323
            G K+ ++   +     P VS +SP+   DE  EH+DIDI+D+FG+G+P+D N  EEK +V FDM+ P    T DEIADVDD+GDE DKG NAAEALRAQ NA+ + E+TS+
Sbjct:  175 GTKAANEGITEHPTHVPNVSTSSPSPKNDEAEEHQDIDIEDIFGAGSPDDGNATEEKVDVDFDMHAPQQNNTDDEIADVDDNGDEADKGLNAAEALRAQENADERDEQTSS 285          
BLAST of FG536159 vs. TrEMBL
Match: B9HW87_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_880707 PE=4 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 3.811e-22
Identity = 57/95 (60.00%), Postives = 72/95 (75.79%), Query Frame = 3
Query:   51 PTVSAASPAAI-DEVGEHRDIDIDDLFGSGTPEDDNNVEEKDNVGFDMNVPI---TVDEIADVDDSGDEVDKGPNAAEALRAQVNAEGKGEETST 323
            P VS +SP+   DE  EH+DIDI+D+FG+G+P+D N  EEK +V FDM+ P    T DEIADVDD+GDE DKG NAAEALRAQ NA+ + E+TS+
Sbjct:  182 PNVSTSSPSPKNDEAEEHQDIDIEDIFGAGSPDDGNATEEKVDVDFDMHAPQQNNTDDEIADVDDNGDEADKGLNAAEALRAQENADERDEQTSS 276          
BLAST of FG536159 vs. TrEMBL
Match: B9SYJ2_RICCO (ELL-associated factor, putative OS=Ricinus communis GN=RCOM_1288580 PE=4 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 6.726e-19
Identity = 60/111 (54.05%), Postives = 72/111 (64.86%), Query Frame = 3
Query:    3 GIKSDSKRSYDQLNEPPTVSAASPAAI-DEVGEHRDIDIDDLFGSGTPEDDNNVEEKDNVGFDMNVPI---TVDEIADVDDSGDEVDKGPNAAEALRAQVNAEGKGEETST 323
            G K  SK   +     P VS +SP+   DE  +H  IDI+D+FGS +P DDN  EEK +   D+ V     T DEIADVDDSGDEV KG NAAEALRAQVNAE + E+TS+
Sbjct:  187 GAKVPSKGISEHPTNLPNVSTSSPSPKNDEAEDH--IDIEDIFGSSSPYDDNTAEEKGDGDLDIIVSRQNETDDEIADVDDSGDEVHKGRNAAEALRAQVNAEERDEQTSS 295          
BLAST of FG536159 vs. TrEMBL
Match: D7TSU6_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_6.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00030895001 PE=4 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 6.515e-14
Identity = 51/111 (45.95%), Postives = 67/111 (60.36%), Query Frame = 3
Query:    3 GIKSDSKRSYDQLNEPPTVSAASPAAID-EVGEHRDIDIDDLFGSGTPEDDNNVEEKDNVGFDMNVPITVD---EIADVDDSGDEVDKGPNAAEALRAQVNAEGKGEETST 323
            G K+ + +  D     P  S  SP + + E+ EH DI  DD     T + +N  E + + G D+N+P   D   EIADVD S DE DKGPNAAEALRAQV+AEG+ E+TS+
Sbjct:  182 GTKAKNGKVVDYPPSRPNPSVTSPNSKNYELEEHLDIINDDNDNFQTAKKENVAEREFHTGIDINLPQQNDIDDEIADVDVSDDEADKGPNAAEALRAQVDAEGREEKTSS 292          
BLAST of FG536159 vs. TrEMBL
Match: A5ATR1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_025292 PE=4 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 6.515e-14
Identity = 51/111 (45.95%), Postives = 67/111 (60.36%), Query Frame = 3
Query:    3 GIKSDSKRSYDQLNEPPTVSAASPAAID-EVGEHRDIDIDDLFGSGTPEDDNNVEEKDNVGFDMNVPITVD---EIADVDDSGDEVDKGPNAAEALRAQVNAEGKGEETST 323
            G K+ + +  D     P  S  SP + + E+ EH DI  DD     T + +N  E + + G D+N+P   D   EIADVD S DE DKGPNAAEALRAQV+AEG+ E+TS+
Sbjct:  182 GTKAKNGKVVDYPPSRPNPSVTSPNSKNYELEEHLDIINDDNDNFQTAKKENVAEREFHTGIDINLPQQNDIDDEIADVDVSDDEADKGPNAAEALRAQVDAEGREEKTSS 292          
BLAST of FG536159 vs. TrEMBL
Match: D7KYI5_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_476240 PE=4 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.515e-13
Identity = 49/97 (50.52%), Postives = 65/97 (67.01%), Query Frame = 3
Query:   57 VSAASPA--AIDEVGEHRDIDIDDLFGSGTPEDDNNVEEKDNVG-----FDMNVPITVDEIADVDD-SGDEVDKGPNAAEALRAQVNAEGKGEETST 323
            VSAASP     D+  EH +ID+ ++FGS TPE+DN  +E  + G      +  + +T +EIADVDD SG E +KG NAAEALRAQVNAE +  +TS+
Sbjct:  181 VSAASPVDDKNDDGDEHHEIDLIEIFGSFTPENDNVEKENADGGEYVESLNKQLSMTEEEIADVDDDSGGEGEKGLNAAEALRAQVNAEVQKSQTSS 277          
BLAST of FG536159 vs. TrEMBL
Match: Q9C9A0_ARATH (At1g71080/F23N20_7 OS=Arabidopsis thaliana GN=At1g71080 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.575e-12
Identity = 47/97 (48.45%), Postives = 64/97 (65.98%), Query Frame = 3
Query:   57 VSAASPAAI--DEVGEHRDIDIDDLFGSGTPEDDNNVEEKDNVG-----FDMNVPITVDEIADVDD-SGDEVDKGPNAAEALRAQVNAEGKGEETST 323
            V A SP     D+  EH++ID+ ++FGS TPE+DN  +E  + G      +  + +T +EIADVDD SG E +KG NAAEALRAQVNAE +  +TS+
Sbjct:  179 VPATSPVEDKNDDGDEHQEIDLVEIFGSFTPENDNAEKENADGGEYVESLNKQLSMTEEEIADVDDDSGGEGEKGLNAAEALRAQVNAEVQKSQTSS 275          
BLAST of FG536159 vs. TAIR peptide
Match: AT1G71080.1 (| Symbols: | RNA polymerase II transcription elongation factor | chr1:26809987-26811645 REVERSE LENGTH=326)

HSP 1 Score: 75.0998 bits (183), Expect = 2.848e-14
Identity = 47/97 (48.45%), Postives = 64/97 (65.98%), Query Frame = 3
Query:   57 VSAASPAAI--DEVGEHRDIDIDDLFGSGTPEDDNNVEEKDNVG-----FDMNVPITVDEIADVDD-SGDEVDKGPNAAEALRAQVNAEGKGEETST 323
            V A SP     D+  EH++ID+ ++FGS TPE+DN  +E  + G      +  + +T +EIADVDD SG E +KG NAAEALRAQVNAE +  +TS+
Sbjct:  179 VPATSPVEDKNDDGDEHQEIDLVEIFGSFTPENDNAEKENADGGEYVESLNKQLSMTEEEIADVDDDSGGEGEKGLNAAEALRAQVNAEVQKSQTSS 275          
The following BLAST results are available for this feature:
BLAST of FG536159 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B7FKM6_MEDTR3.103e-4077.88Putative uncharacterized protein OS=Medicago trunc... [more]
C6TAA1_SOYBN6.056e-3675.70Putative uncharacterized protein OS=Glycine max PE... [more]
B9HJ94_POPTR8.765e-2756.36Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
A9PG79_POPTR2.234e-2253.15Putative uncharacterized protein OS=Populus tricho... [more]
B9HW87_POPTR3.811e-2260.00Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9SYJ2_RICCO6.726e-1954.05ELL-associated factor, putative OS=Ricinus communi... [more]
D7TSU6_VITVI6.515e-1445.95Whole genome shotgun sequence of line PN40024, sca... [more]
A5ATR1_VITVI6.515e-1445.95Putative uncharacterized protein OS=Vitis vinifera... [more]
D7KYI5_ARALY5.515e-1350.52Putative uncharacterized protein OS=Arabidopsis ly... [more]
Q9C9A0_ARATH3.575e-1248.45At1g71080/F23N20_7 OS=Arabidopsis thaliana GN=At1g... [more]
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BLAST of FG536159 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT1G71080.12.848e-1448.45| Symbols: | RNA polymerase II transcription elon... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 13..37
score
NoneNo IPR availablePANTHERPTHR15970FAMILY NOT NAMEDcoord: 28..131
score: 4.2
NoneNo IPR availablePANTHERPTHR15970:SF2gb def: Hypothetical protein F23N20.7 (At1g71080/F23N20_7)coord: 28..131
score: 4.2
NoneNo IPR availableSEGsegsegcoord: 108..137
score
NoneNo IPR availableSEGsegsegcoord: 19..46
score: NAcoord: 64..86
score: NAcoord: 96..107
score
NoneNo IPR availableSEGsegsegcoord: 1..28
score: NAcoord: 78..89
score

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FG536159 ID=FG536159; Name=FG536159; organism=Pisum sativum; type=EST; length=564bp
CTGGCATCAAGTCTGATTCTAAGAGGTCATATGATCAACTAAATGAACCG
CCCACTGTTTCTGCTGCCTCACCCGCTGCCATAGATGAAGTTGGGGAACA
TAGAGATATAGACATTGATGACCTTTTTGGAAGTGGAACACCTGAGGATG
ACAATAATGTTGAAGAAAAGGATAATGTTGGATTTGACATGAATGTTCCC
ATCACTGTTGATGAGATCGCTGATGTGGATGATAGTGGTGACGAGGTGGA
CAAAGGACCCAATGCCGCCGAAGCTCTCAGAGCCCAAGTGAATGCAGAGG
GGAAGGGTGAAGAAACATCTACTTCTAGCAGTAGCAGTGACAGTGGAAGC
AGCAGTGATAGTGGTAGTGGGAGCAGCAGCAGCAGTGATAGTGGAGGCAG
CGATGACGACTCAGTTACCTCAATATAAAATTGCACAACTATGATTTTTT
CTTTCTTTTCCTTTTATCAGTTATCATTGCAACTAATCCAATATATAGAA
TGTGTTTATTAAGCCCGGGCGAGAAGAATGTAGATTCTAAAAGGTTATTA
ATGATGTGGAATAT
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