FG536803

EST Overview
NameFG536803
Unique NameFG536803
TypeEST
OrganismPisum sativum (pea)
Sequence length577
Libraries
Library NameType
LIBEST_023215 MeriZ Pisum sativum Shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Pisum sativum unigene v12010-12-29
Homology
BLAST of FG536803 vs. TrEMBL
Match: B9RX24_RICCO (Transcription factor RF2b, putative OS=Ricinus communis GN=RCOM_0816450 PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.476e-11
Identity = 33/62 (53.23%), Postives = 44/62 (70.97%), Query Frame = 2
Query:    2 QHSGPSGHLNIQYPQFSHSPSNMPTHQLQQTNSRQMSEMWQNDHLGSFKGLDISSKGSALVK 187
            Q SG + H N+Q+P ++HS +++P H L QTNS   SE+ QND LG  +GLDISSKG  +VK
Sbjct:  310 QQSGSANHPNMQFPPYAHSQTSIPGHHLHQTNSHTFSELMQNDSLGRLQGLDISSKGPNIVK 371          
BLAST of FG536803 vs. TrEMBL
Match: B9I6X5_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1097667 PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.476e-11
Identity = 34/74 (45.95%), Postives = 47/74 (63.51%), Query Frame = 2
Query:   11 GPSGHLNIQYPQFSHSPSNMPTHQLQQTNSRQMSEMWQNDHLGSFKGLDISSKGSALVKXXXXXXXXXXXXTTF 232
            GP+GH N+Q P F+HSPS+M T  + Q +S+ +S+  QND +G  +GLDIS+KGS +VK            TTF
Sbjct:  267 GPAGHPNMQLPSFTHSPSSMSTRHIHQVDSQSLSDYMQNDPIGRLQGLDISNKGSHIVKSEGPSLSASESSTTF 340          
BLAST of FG536803 vs. TrEMBL
Match: D7SJI9_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00024562001 PE=4 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.323e-11
Identity = 36/62 (58.06%), Postives = 43/62 (69.35%), Query Frame = 2
Query:    2 QHSGPSGHLNIQYPQFSHSPSNMPTHQLQQTNSRQMSEMWQNDHLGSFKGLDISSKGSALVK 187
            Q  GP+G  N+Q P F HS SNM T  LQ  NS+ +SE+ QND LG  +GLDISS+GS LVK
Sbjct:  143 QQIGPAGQPNMQLPPFHHSHSNMSTQYLQPINSQPISEILQNDPLGRLQGLDISSRGSHLVK 204          
BLAST of FG536803 vs. TrEMBL
Match: A5AZN7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_035032 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.323e-11
Identity = 36/62 (58.06%), Postives = 43/62 (69.35%), Query Frame = 2
Query:    2 QHSGPSGHLNIQYPQFSHSPSNMPTHQLQQTNSRQMSEMWQNDHLGSFKGLDISSKGSALVK 187
            Q  GP+G  N+Q P F HS SNM T  LQ  NS+ +SE+ QND LG  +GLDISS+GS LVK
Sbjct:  266 QQIGPAGQPNMQLPPFHHSHSNMSTQYLQPINSQPISEILQNDPLGRLQGLDISSRGSHLVK 327          
BLAST of FG536803 vs. TrEMBL
Match: B9INM1_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_739018 PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 1.057e-9
Identity = 30/59 (50.85%), Postives = 41/59 (69.49%), Query Frame = 2
Query:   11 GPSGHLNIQYPQFSHSPSNMPTHQLQQTNSRQMSEMWQNDHLGSFKGLDISSKGSALVK 187
            G SGH N+Q P F+H+P +M TH LQQ +S  +S+  QND +   +GLDIS+KG  +VK
Sbjct:  250 GSSGHPNMQLPSFTHTPPSMSTHHLQQADSHNLSDYMQNDPIRQLQGLDISNKGLNIVK 308          
BLAST of FG536803 vs. TrEMBL
Match: A5BMU0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_012579 PE=3 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 3.761e-7
Identity = 33/62 (53.23%), Postives = 39/62 (62.90%), Query Frame = 2
Query:   11 GPSGHLNIQYPQFSHSPSNMPTHQ---LQQTNSRQMSEMWQNDHLGSFKGLDISSKGSALVK 187
            GPS   NIQ PQF   PSNM TH    L   +S  +S+M Q D LG  +GLDISS+G +LVK
Sbjct:  336 GPSESQNIQMPQFHPFPSNMLTHHQPLLGVAHSNALSDMLQQDPLGRLQGLDISSRGPSLVK 397          
The following BLAST results are available for this feature:
BLAST of FG536803 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 6
Match NameE-valueIdentityDescription
B9RX24_RICCO1.476e-1153.23Transcription factor RF2b, putative OS=Ricinus com... [more]
B9I6X5_POPTR1.476e-1145.95Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
D7SJI9_VITVI7.323e-1158.06Whole genome shotgun sequence of line PN40024, sca... [more]
A5AZN7_VITVI7.323e-1158.06Putative uncharacterized protein OS=Vitis vinifera... [more]
B9INM1_POPTR1.057e-950.85Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
A5BMU0_VITVI3.761e-753.23Putative uncharacterized protein OS=Vitis vinifera... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 63..74
score

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FG536803 ID=FG536803; Name=FG536803; organism=Pisum sativum; type=EST; length=577bp
ACAACATTCAGGTCCTTCTGGACACCTGAACATACAATATCCTCAATTCA
GCCACTCTCCATCTAACATGCCAACTCATCAGCTGCAACAAACCAATTCT
CGCCAAATGTCAGAGATGTGGCAAAACGATCACCTCGGTAGTTTTAAGGG
ACTTGACATCAGTAGCAAAGGATCCGCCCTCGTGAAGTCCGAAGGTCCCT
CAATATCTGCAAGTGAGAGTAGCACTACATTTTGAATTTAACCTAAGCTC
CTTGACCTGCTGACTTATTTATGGTATTCCATTCTTGTCATTTGTCCATA
GTGTTGACATGTAGTCATATAAAGAAGGTTCTCTGTTTCATTAAACATTC
AATTTAGATTAAAAATTAGTTCTTGATTGTTTATTCTTAGGGATGCTCCC
CAAAAAGGGGAAGCACCCTTGTGGTTTTGTTGCAAAAAGTTCGCGCAATC
ACGTCGAAGCGCGGCATTTTCGTGTTGTGGGTTTTAATATTAGGAATGAA
AGGTCATTCTCTTCTCTTGGTGTCTTTGTATGTTGGGATGGTTTTTGATT
CCTCTATGGTCATGTCTATCATCATTT
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