AM161993

EST Overview
NameAM161993
Unique NameAM161993
TypeEST
OrganismPisum sativum (pea)
Sequence length127
Libraries
Library NameType
LIBEST_019360 Pisum sativum leaf vegetativecdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
Homology
[Close]
BLAST of AM161993 vs. TrEMBL
Match: D7KDL8_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_471797 PE=4 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 1.443e-7
Identity = 27/42 (64.29%), Postives = 30/42 (71.43%), Query Frame = 1 
Query:    1 TDRGKQCYELNKNVRWANVXXXXXXXXXXAEYTDSLGVLRGR 126
            TDRGKQ YELNKNVRWANV          AEYTD +G+L+GR
Sbjct:  152 TDRGKQTYELNKNVRWANVYDPDDHWPEPAEYTDMIGILKGR 193
[Close]
BLAST of AM161993 vs. TrEMBL
Match: Q9S9N6_ARATH (At1g15980/T24D18_8 OS=Arabidopsis thaliana GN=At1g15980 PE=2 SV=1)

HSP 1 Score: 56.9954 bits (136), Expect = 7.160e-7
Identity = 26/42 (61.90%), Postives = 30/42 (71.43%), Query Frame = 1 
Query:    1 TDRGKQCYELNKNVRWANVXXXXXXXXXXAEYTDSLGVLRGR 126
            T+RGKQ YELNKNVRWANV          AEYTD +G+L+GR
Sbjct:  153 TERGKQTYELNKNVRWANVYDPDDHWPEPAEYTDMIGLLKGR 194
[Close]
BLAST of AM161993 vs. TAIR peptide
Match: AT1G15980.1 (| Symbols: NDF1, NDH48 | NDH-dependent cyclic electron flow 1 | chr1:5489314-5491199 FORWARD LENGTH=461)

HSP 1 Score: 56.9954 bits (136), Expect = 2.799e-9
Identity = 26/42 (61.90%), Postives = 30/42 (71.43%), Query Frame = 1 
Query:    1 TDRGKQCYELNKNVRWANVXXXXXXXXXXAEYTDSLGVLRGR 126
            T+RGKQ YELNKNVRWANV          AEYTD +G+L+GR
Sbjct:  153 TERGKQTYELNKNVRWANVYDPDDHWPEPAEYTDMIGLLKGR 194
The following BLAST results are available for this feature:
BLAST of AM161993 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 2
Match NameE-valueIdentityDescription
D7KDL8_ARALY1.443e-764.29Putative uncharacterized protein OS=Arabidopsis ly... [more]
Q9S9N6_ARATH7.160e-761.90At1g15980/T24D18_8 OS=Arabidopsis thaliana GN=At1g... [more]
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BLAST of AM161993 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT1G15980.12.799e-961.90| Symbols: NDF1, NDH48 | NDH-dependent cyclic elec... [more]
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Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>AM161993 ID=AM161993; Name=AM161993; organism=Pisum sativum; type=EST; length=127bp
ACTGATAGAGGGAAACAGTGTTATGAGTTGAATAAGAATGTTCGATGGGC
TAATGTTTTTGATCCTGAAGACGAGTTTCCTGAGCCTGCTGAGTATACTG
ATTCTCTTGGAGTTCTAAGGGGTAGGT
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