EX570378

EST Overview
NameEX570378
Unique NameEX570378
TypeEST
OrganismPisum sativum (pea)
Sequence length420
Libraries
Library NameType
LIBEST_021973 Pisum sativum shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
InterProScan analysis for Pisum sativum unigene v12010-12-29
Homology
BLAST of EX570378 vs. TrEMBL
Match: D7TVW8_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_25.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00019720001 PE=4 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 2.665e-46
Identity = 89/104 (85.58%), Postives = 99/104 (95.19%), Query Frame = 2
Query:    2 LYTRIALGKAKRMDVVWGETSGVDGQLWLLCPILFILQGFEAYVGLLLLNTAFAGEISEWQVIFCGLLLVVMAIGNFENTVQTLLVKSRFKAKMRRTKSKQRLD 313
            LYTRIALGKAKRMDVVWGET+GVDGQLWLLCPILFILQGFEAYVGLLLL TAF G +SEWQV+FCG+LLV+MA+GNF NTVQTL+VKSRFKAKM+R+KSKQ L+
Sbjct:  258 LYTRIALGKAKRMDVVWGETAGVDGQLWLLCPILFILQGFEAYVGLLLLKTAFVGVVSEWQVVFCGVLLVLMAVGNFANTVQTLMVKSRFKAKMKRSKSKQELN 361          
BLAST of EX570378 vs. TrEMBL
Match: C6TLW0_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 1.728e-45
Identity = 89/104 (85.58%), Postives = 97/104 (93.27%), Query Frame = 2
Query:    2 LYTRIALGKAKRMDVVWGETSGVDGQLWLLCPILFILQGFEAYVGLLLLNTAFAGEISEWQVIFCGLLLVVMAIGNFENTVQTLLVKSRFKAKMRRTKSKQRLD 313
            LYTRIALGKAKRMDVVWGET+GVDGQLWLLCPILF LQGFEAYVGLLLL TA  G +SEWQVIFCG+LLV+MA+GNF NTVQTL+ KSRFKAKMRR+KSKQRL+
Sbjct:  251 LYTRIALGKAKRMDVVWGETAGVDGQLWLLCPILFTLQGFEAYVGLLLLRTAVVGVVSEWQVIFCGVLLVLMAVGNFANTVQTLMAKSRFKAKMRRSKSKQRLN 354          
BLAST of EX570378 vs. TrEMBL
Match: C6TE84_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 1.728e-45
Identity = 89/104 (85.58%), Postives = 97/104 (93.27%), Query Frame = 2
Query:    2 LYTRIALGKAKRMDVVWGETSGVDGQLWLLCPILFILQGFEAYVGLLLLNTAFAGEISEWQVIFCGLLLVVMAIGNFENTVQTLLVKSRFKAKMRRTKSKQRLD 313
            LYTRIALGKAKRMDVVWGET+GVDGQLWLLCPILF LQGFEAYVGLLLL TA  G +SEWQVIFCG+LLV+MA+GNF NTVQTL+ KSRFKAKMRR+KSKQRL+
Sbjct:  251 LYTRIALGKAKRMDVVWGETAGVDGQLWLLCPILFTLQGFEAYVGLLLLRTAVVGVVSEWQVIFCGVLLVLMAVGNFANTVQTLMAKSRFKAKMRRSKSKQRLN 354          
BLAST of EX570378 vs. TrEMBL
Match: B9RYZ8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1315110 PE=4 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 5.026e-45
Identity = 89/104 (85.58%), Postives = 96/104 (92.31%), Query Frame = 2
Query:    2 LYTRIALGKAKRMDVVWGETSGVDGQLWLLCPILFILQGFEAYVGLLLLNTAFAGEISEWQVIFCGLLLVVMAIGNFENTVQTLLVKSRFKAKMRRTKSKQRLD 313
            LYTRIALGKAKRMDVVWGET+GVDGQLWLLCPILFILQGFEAYVGL LL TAF   +SEWQVIFCG+LLV MA+GNF NTVQTL+VKSRFKAKM+R+KSKQ LD
Sbjct:  257 LYTRIALGKAKRMDVVWGETAGVDGQLWLLCPILFILQGFEAYVGLQLLRTAFVRVVSEWQVIFCGMLLVFMAVGNFFNTVQTLMVKSRFKAKMKRSKSKQELD 360          
BLAST of EX570378 vs. TrEMBL
Match: B9I0N0_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1094738 PE=4 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.159e-41
Identity = 87/104 (83.65%), Postives = 93/104 (89.42%), Query Frame = 2
Query:    2 LYTRIALGKAKRMDVVWGETSGVDGQLWLLCPILFILQGFEAYVGLLLLNTAFAGEISEWQVIFCGLLLVVMAIGNFENTVQTLLVKSRFKAKMRRTKSKQRLD 313
            LYTRIALGKAKRMDVVWGET+GVDGQLWLL PILFILQGFEAYVGL LL TAF G  SEWQVIFCG+LLV MA+GNF NTVQTL+ KSRFKAKM ++KSKQ LD
Sbjct:  261 LYTRIALGKAKRMDVVWGETAGVDGQLWLLYPILFILQGFEAYVGLQLLRTAFKGVTSEWQVIFCGILLVFMAVGNFLNTVQTLMAKSRFKAKM-KSKSKQELD 363          
BLAST of EX570378 vs. TrEMBL
Match: A9PA66_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.159e-41
Identity = 85/104 (81.73%), Postives = 94/104 (90.38%), Query Frame = 2
Query:    2 LYTRIALGKAKRMDVVWGETSGVDGQLWLLCPILFILQGFEAYVGLLLLNTAFAGEISEWQVIFCGLLLVVMAIGNFENTVQTLLVKSRFKAKMRRTKSKQRLD 313
            LYTRIALGKAKRMDVVWGET+GVDGQLWLLCPILFILQGFEAYVGL LL TA+ G  SEWQVIFCG+LLV MA+GNF NTV+ L+VKSRFKAKM ++KSKQ +D
Sbjct:   50 LYTRIALGKAKRMDVVWGETAGVDGQLWLLCPILFILQGFEAYVGLQLLRTAYKGVTSEWQVIFCGVLLVFMAVGNFLNTVEILMVKSRFKAKM-KSKSKQEMD 152          
BLAST of EX570378 vs. TrEMBL
Match: B9GJK2_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_177101 PE=4 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 5.751e-41
Identity = 84/103 (81.55%), Postives = 93/103 (90.29%), Query Frame = 2
Query:    2 LYTRIALGKAKRMDVVWGETSGVDGQLWLLCPILFILQGFEAYVGLLLLNTAFAGEISEWQVIFCGLLLVVMAIGNFENTVQTLLVKSRFKAKMRRTKSKQRL 310
            LYTRIALGKAKRMDVVWGET+GVDGQLWLLCPILFILQGFEAYVGL LL TA+ G  SEWQVIFCG+LLV MA+GNF NTV+ L+VKSRFKAKM ++KSKQ +
Sbjct:  244 LYTRIALGKAKRMDVVWGETAGVDGQLWLLCPILFILQGFEAYVGLQLLRTAYKGVTSEWQVIFCGVLLVFMAVGNFLNTVEILMVKSRFKAKM-KSKSKQEM 345          
BLAST of EX570378 vs. TrEMBL
Match: Q93XX0_ARATH (Putative uncharacterized protein At4g10430 OS=Arabidopsis thaliana GN=At4g10430/ F7L13.10 PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 1.850e-39
Identity = 79/104 (75.96%), Postives = 91/104 (87.50%), Query Frame = 2
Query:    2 LYTRIALGKAKRMDVVWGETSGVDGQLWLLCPILFILQGFEAYVGLLLLNTAFAGEISEWQVIFCGLLLVVMAIGNFENTVQTLLVKSRFKAKMRRTKSKQRLD 313
            LYTRIALGKAKRMDVVWGET+GVDGQLWLLCPILFILQ FEAYVGLLLL     G ++EWQV+ CG+LLVVMA+GNF NTV+TL+ KSR KAKM+R+KS+  L+
Sbjct:  244 LYTRIALGKAKRMDVVWGETAGVDGQLWLLCPILFILQVFEAYVGLLLLRKTVTGVVNEWQVMVCGILLVVMAVGNFINTVETLMAKSRVKAKMKRSKSRAELN 347          
BLAST of EX570378 vs. TrEMBL
Match: D7LY53_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_911340 PE=4 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 1.850e-39
Identity = 79/104 (75.96%), Postives = 91/104 (87.50%), Query Frame = 2
Query:    2 LYTRIALGKAKRMDVVWGETSGVDGQLWLLCPILFILQGFEAYVGLLLLNTAFAGEISEWQVIFCGLLLVVMAIGNFENTVQTLLVKSRFKAKMRRTKSKQRLD 313
            LYTRIALGKAKRMDVVWGET+GVDGQLWLLCPILFILQ FEAYVGLLLL     G ++EWQV+ CG+LLVVMA+GNF NTV+TL+ KSR KAKM+R+KS+  L+
Sbjct:  244 LYTRIALGKAKRMDVVWGETAGVDGQLWLLCPILFILQVFEAYVGLLLLRKTVTGVVNEWQVMVCGILLVVMAVGNFINTVETLIAKSRVKAKMKRSKSRAELN 347          
BLAST of EX570378 vs. TrEMBL
Match: D7KIG7_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_473496 PE=4 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 2.416e-39
Identity = 81/104 (77.88%), Postives = 91/104 (87.50%), Query Frame = 2
Query:    2 LYTRIALGKAKRMDVVWGETSGVDGQLWLLCPILFILQGFEAYVGLLLLNTAFAGEISEWQVIFCGLLLVVMAIGNFENTVQTLLVKSRFKAKMRRTKSKQRLD 313
            LYTRIALGKAKRMDVVWGET+GVDGQL LL PILF LQGFEAYVGL LL T   G ++EWQV+ CG+LLVVMAIGNF NTV+TL+VKSRFKAKM+R+KS+  LD
Sbjct:  245 LYTRIALGKAKRMDVVWGETAGVDGQLLLLFPILFTLQGFEAYVGLQLLRTVLTGVVAEWQVLVCGILLVVMAIGNFINTVETLMVKSRFKAKMKRSKSRAELD 348          
BLAST of EX570378 vs. TAIR peptide
Match: AT4G10430.3 (| Symbols: | TMPIT-like protein | chr4:6455110-6457996 REVERSE LENGTH=347)

HSP 1 Score: 165.236 bits (417), Expect = 1.116e-41
Identity = 79/104 (75.96%), Postives = 91/104 (87.50%), Query Frame = 2
Query:    2 LYTRIALGKAKRMDVVWGETSGVDGQLWLLCPILFILQGFEAYVGLLLLNTAFAGEISEWQVIFCGLLLVVMAIGNFENTVQTLLVKSRFKAKMRRTKSKQRLD 313
            LYTRIALGKAKRMDVVWGET+GVDGQLWLLCPILFILQ FEAYVGLLLL     G ++EWQV+ CG+LLVVMA+GNF NTV+TL+ KSR KAKM+R+KS+  L+
Sbjct:  244 LYTRIALGKAKRMDVVWGETAGVDGQLWLLCPILFILQVFEAYVGLLLLRKTVTGVVNEWQVMVCGILLVVMAVGNFINTVETLMAKSRVKAKMKRSKSRAELN 347          
BLAST of EX570378 vs. TAIR peptide
Match: AT4G10430.1 (| Symbols: | TMPIT-like protein | chr4:6455110-6457996 REVERSE LENGTH=347)

HSP 1 Score: 165.236 bits (417), Expect = 1.116e-41
Identity = 79/104 (75.96%), Postives = 91/104 (87.50%), Query Frame = 2
Query:    2 LYTRIALGKAKRMDVVWGETSGVDGQLWLLCPILFILQGFEAYVGLLLLNTAFAGEISEWQVIFCGLLLVVMAIGNFENTVQTLLVKSRFKAKMRRTKSKQRLD 313
            LYTRIALGKAKRMDVVWGET+GVDGQLWLLCPILFILQ FEAYVGLLLL     G ++EWQV+ CG+LLVVMA+GNF NTV+TL+ KSR KAKM+R+KS+  L+
Sbjct:  244 LYTRIALGKAKRMDVVWGETAGVDGQLWLLCPILFILQVFEAYVGLLLLRKTVTGVVNEWQVMVCGILLVVMAVGNFINTVETLMAKSRVKAKMKRSKSRAELN 347          
BLAST of EX570378 vs. TAIR peptide
Match: AT1G33230.1 (| Symbols: | TMPIT-like protein | chr1:12046844-12049794 FORWARD LENGTH=347)

HSP 1 Score: 160.614 bits (405), Expect = 2.750e-40
Identity = 79/103 (76.70%), Postives = 89/103 (86.41%), Query Frame = 2
Query:    2 LYTRIALGKAKRMDVVWGETSGVDGQLWLLCPILFILQGFEAYVGLLLLNTAFAGEISEWQVIFCGLLLVVMAIGNFENTVQTLLVKSRFKAKMRRTKSKQRL 310
            LYTRIALGKAKRMDVVWGET+GVDGQL LL PILF LQGFEAYVG  LL T   G ++EWQV+ CG+LLVVMAIGNF NTV+TL+VKSRFKAKM+R+KS+  L
Sbjct:  245 LYTRIALGKAKRMDVVWGETAGVDGQLLLLFPILFTLQGFEAYVGFQLLRTVLMGVVAEWQVLVCGILLVVMAIGNFINTVETLMVKSRFKAKMKRSKSRAEL 347          
BLAST of EX570378 vs. TAIR peptide
Match: AT4G10430.2 (| Symbols: | TMPIT-like protein | chr4:6455153-6457690 REVERSE LENGTH=250)

HSP 1 Score: 83.5741 bits (205), Expect = 1.233e-20
Identity = 39/56 (69.64%), Postives = 47/56 (83.93%), Query Frame = 2
Query:    2 LYTRIALGKAKRMDVVWGETSGVDGQLWLLCPILFILQGFEAYVGLLLLNTAFAGE 169
            LYTRIALGKAKRMDVVWGET+GVDGQLWLLCPILFILQ + ++   ++ N +  G+
Sbjct:  168 LYTRIALGKAKRMDVVWGETAGVDGQLWLLCPILFILQVYFSHSRGIVFNGSIPGD 223          

HSP 2 Score: 32.3426 bits (72), Expect = 1.233e-20
Identity = 16/28 (57.14%), Postives = 19/28 (67.86%), Query Frame = 1
Query:  184 GNILRSSVGRNGHWEL*KYSTDSVGKVK 267
            G+ L  S G +G WEL KYS D+ GKVK
Sbjct:  222 GDGLWDSSGSDGSWELHKYSRDTDGKVK 249          
The following BLAST results are available for this feature:
BLAST of EX570378 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
D7TVW8_VITVI2.665e-4685.58Whole genome shotgun sequence of line PN40024, sca... [more]
C6TLW0_SOYBN1.728e-4585.58Putative uncharacterized protein OS=Glycine max PE... [more]
C6TE84_SOYBN1.728e-4585.58Putative uncharacterized protein OS=Glycine max PE... [more]
B9RYZ8_RICCO5.026e-4585.58Putative uncharacterized protein OS=Ricinus commun... [more]
B9I0N0_POPTR1.159e-4183.65Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
A9PA66_POPTR1.159e-4181.73Putative uncharacterized protein OS=Populus tricho... [more]
B9GJK2_POPTR5.751e-4181.55Predicted protein (Fragment) OS=Populus trichocarp... [more]
Q93XX0_ARATH1.850e-3975.96Putative uncharacterized protein At4g10430 OS=Arab... [more]
D7LY53_ARALY1.850e-3975.96Putative uncharacterized protein OS=Arabidopsis ly... [more]
D7KIG7_ARALY2.416e-3977.88Putative uncharacterized protein OS=Arabidopsis ly... [more]
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BLAST of EX570378 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 4
Match NameE-valueIdentityDescription
AT4G10430.31.116e-4175.96| Symbols: | TMPIT-like protein | chr4:6455110-64... [more]
AT4G10430.11.116e-4175.96| Symbols: | TMPIT-like protein | chr4:6455110-64... [more]
AT1G33230.12.750e-4076.70| Symbols: | TMPIT-like protein | chr1:12046844-1... [more]
AT4G10430.21.233e-2069.64| Symbols: | TMPIT-like protein | chr4:6455153-64... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012926TMPIT-likePANTHERPTHR21433TRANSMEMBRANE PROTEIN INDUCED BY TUMOR NECROSIS FACTOR ALPHAcoord: 1..102
score: 2.5
IPR012926TMPIT-likePFAMPF07851TMPITcoord: 1..94
score: 7.6
NoneNo IPR availableSEGsegsegcoord: 3..16
score

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>EX570378 ID=EX570378; Name=EX570378; organism=Pisum sativum; type=EST; length=420bp
ACTTTATACTCGTATTGCATTGGGAAAGGCGAAGAGGATGGATGTTGTAT
GGGGGGAAACATCTGGTGTGGATGGCCAACTGTGGTTGCTGTGTCCCATA
CTTTTCATATTGCAGGGATTTGAGGCATATGTTGGACTATTGTTGCTCAA
TACTGCATTTGCTGGGGAGATTTCTGAATGGCAGGTAATATTTTGCGGTC
TTCTGTTGGTCGTAATGGCCATTGGGAACTTTGAAAATACAGTACAGACT
CTGTTGGTAAAGTCAAGATTTAAGGCAAAAATGAGAAGAACCAAGAGCAA
GCAGAGACTGGATTAGCAAGTTGTGACGTCTTGAGCTTTTGATAGGATCA
GAATCTTTTTGCAGTCTTTTAAGTTTTGACCACTGTGCATGTCTAGTGAT
AATTTTGGCTTTGTTGTAGC
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: INTERPRO
TermDefinition
IPR012926TACAN/TMEM120B